Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1794
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    24   4.0  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   4.0  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    23   7.0  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 280 DVCNDKYVNNNNK*LGKNHARSF 348
           DVC   +V+   +  G NH+ SF
Sbjct: 575 DVCQKLFVSQKEREEGSNHSESF 597


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 280 DVCNDKYVNNNNK*LGKNHARSF 348
           DVC   +V+   +  G NH+ SF
Sbjct: 575 DVCQKLFVSQKEREEGSNHSESF 597


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 451 RTNKPVHHTNTCPMWESNPRPSA 519
           R  KP H    CPM ESN  P++
Sbjct: 206 RCRKPGHMKRDCPM-ESNNTPTS 227


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 725,739
Number of Sequences: 2352
Number of extensions: 13905
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)