Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1794
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.40 
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   3.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.4  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +3

Query: 471 SHEHLPDVGIEPTTLGTTVRATKYSTTQSNNTKQANT 581
           +H H  + G   TT+ T    T  +TT +  T   NT
Sbjct: 644 THSHPHEPGAPATTITTITTTTTTTTTTTTTTTTPNT 680


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +3

Query: 504 PTTLGTTVRAT 536
           PT LGTTVRA+
Sbjct: 271 PTNLGTTVRAS 281


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 484 KCSCDGQVCLFFVWMLIIY 428
           K  C GQVCL  V  L I+
Sbjct: 37  KTLCSGQVCLGSVMQLPIH 55


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,626
Number of Sequences: 438
Number of extensions: 4926
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)