Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1793
         (720 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    26   0.41 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.9  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.7  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.8 bits (54), Expect = 0.41
 Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = -3

Query: 217 PIIISVPTPVLRTKN--MNNNTDFTVFHTIIHYTRTHRYYLKPILNLLVYFDNYDVLRNA 44
           PI++ +     RT +  +  NTDF +      Y+    +Y+  I+ + +Y++ +  LRN 
Sbjct: 320 PIVLGLNNTPDRTPDQCLFYNTDFII------YSSLSSFYIPCIIMVFLYYNIFKALRNR 373

Query: 43  SNK 35
           + K
Sbjct: 374 ARK 376


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 130 HYTRTHRYYLKPILNLLVYFDNYD 59
           H    +RYYL+ + N L Y + +D
Sbjct: 263 HKLLLNRYYLERLSNDLPYLEEFD 286


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = -3

Query: 148 VFHTIIHYTRTHRYYLKPILNLLVYFDNYDVLRNASNKYIVFFFSKW 8
           + +TI+ Y     YYL   +N L+Y    +  R A    +     KW
Sbjct: 324 IIYTILTYMSGVFYYLSTTVNPLLYNIMSNKFREAFKLMLPNCCGKW 370


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 138 VWKTVKSVLLFIFLVLRTGVGTDIMI 215
           VW+   + L   FLVL T +G  ++I
Sbjct: 33  VWEAAAASLTLGFLVLATVLGNALVI 58


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 138 VWKTVKSVLLFIFLVLRTGVGTDIMI 215
           VW+   + L   FLVL T +G  ++I
Sbjct: 33  VWEAAAASLTLGFLVLATVLGNALVI 58


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 138 VWKTVKSVLLFIFLVLRTGVGTDIMI 215
           VW+   + L   FLVL T +G  ++I
Sbjct: 33  VWEAAAASLTLGFLVLATVLGNALVI 58


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,987
Number of Sequences: 438
Number of extensions: 4034
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)