Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1792
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 278 2e-75
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 274 2e-74
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 260 5e-70
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 170 7e-43
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 140 5e-34
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 136 1e-32
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 134 5e-32
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 132 2e-31
03_01_0034 + 318432-318825,318902-319851 132 2e-31
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 131 4e-31
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 115 3e-26
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 113 1e-25
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 105 3e-23
07_01_0221 - 1635381-1637477 29 1.7
08_02_1566 + 27909297-27909390,27909542-27909645,27912899-279130... 28 3.9
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 28 3.9
09_02_0256 - 6350559-6350573,6351025-6351762 28 5.1
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 27 6.8
03_06_0700 + 35616619-35617069,35619123-35619502 27 6.8
10_02_0143 + 5795028-5795108,5795197-5795403,5795878-5795976,579... 27 8.9
08_01_0312 + 2764744-2767390,2767632-2767990 27 8.9
08_01_0009 + 68825-68950,72571-72669,72841-72929,74971-75087,757... 27 8.9
04_04_1189 + 31586991-31587291,31587358-31587397,31587449-315875... 27 8.9
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 278 bits (682), Expect = 2e-75
Identities = 122/148 (82%), Positives = 136/148 (91%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
H+PRA FVDLEPT +DEVRTG YRQL H +QLI+G EDAANN+ARGHYTIGKEI L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
RIRKLAD CTGLQGFL+F++ GGGTGSG
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSG 148
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 274 bits (673), Expect = 2e-74
Identities = 120/148 (81%), Positives = 135/148 (91%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
H+PRA FVDLEPT +DEVRTG YRQL H +QLI G EDAANN+ARGHYTIGKEI L LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
RIRKLAD CTGLQGFL+F++ GGGTGSG
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSG 148
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 260 bits (637), Expect = 5e-70
Identities = 113/148 (76%), Positives = 132/148 (89%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
H+PRA FVDLEPT +DEVRTG+YRQL H +QLI+G EDAANN+ARGHYT+GKEI L LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
R+RKLAD CTGLQGFL+F++ GGGTGSG
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSG 148
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 170 bits (413), Expect = 7e-43
Identities = 77/111 (69%), Positives = 93/111 (83%)
Frame = +3
Query: 183 TDKTIGGGDDSFNTFFSETGAGKHLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*E 362
+D T G D+FNTFFSET +GKH+PRA FVDLEPT +DEV+TG YRQL H +QLI+ E
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKE 157
Query: 363 DAANNYARGHYTIGKEIDHLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSG 515
DAANN+ARGHYT+G+E+ L LDR+RKLAD CTGLQGFL+F++ GGGTGSG
Sbjct: 158 DAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSG 208
Score = 81.4 bits (192), Expect = 4e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 188
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 140 bits (340), Expect = 5e-34
Identities = 69/154 (44%), Positives = 92/154 (59%)
Frame = +3
Query: 54 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 233
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYN 232
Query: 234 ETGAGKHLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEI 413
E G+ +PRA +DLEP +D VRTG Y Q+ + G A NN+A+GHYT G E+
Sbjct: 233 EASCGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL 292
Query: 414 DHLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSG 515
VLD +RK A+ C LQGF + HS GGGTGSG
Sbjct: 293 IDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSG 326
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 136 bits (329), Expect = 1e-32
Identities = 68/151 (45%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 242
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGTSDLQLERVNVYYNEAS 55
Query: 243 AGKHLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHL 422
G+ +PRA +DLEP +D VRTG Y Q+ + G A NN+A+GHYT G E+
Sbjct: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
Query: 423 VLDRIRKLADQCTGLQGFLIFHSFGGGTGSG 515
VLD +RK A+ C LQGF + HS GGGTGSG
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSG 146
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 134 bits (323), Expect = 5e-32
Identities = 65/148 (43%), Positives = 88/148 (59%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PRA +DLEP +D VR+G Y Q+ + G A NN+A+GHYT G E+ VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
+RK A+ C LQGF + HS GGGTGSG
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSG 146
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 132 bits (319), Expect = 2e-31
Identities = 63/148 (42%), Positives = 88/148 (59%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQL--ERINVYYNEASGGR 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PRA +DLEP +D VR+G + Q+ + G A NN+A+GHYT G E+ VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
+RK A+ C LQGF + HS GGGTGSG
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSG 146
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 132 bits (319), Expect = 2e-31
Identities = 64/148 (43%), Positives = 86/148 (58%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQL--ERVNVYYNEASCGR 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
+PRA +DLEP +D VR+G Y + + G A NN+A+GHYT G E+ VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
+RK A+ C LQGF + HS GGGTGSG
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSG 146
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 131 bits (316), Expect = 4e-31
Identities = 64/148 (43%), Positives = 87/148 (58%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
+PRA +DLEP +D VR+G + Q+ + G A NN+A+GHYT G E+ VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
+RK A+ C LQGF + HS GGGTGSG
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSG 146
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 115 bits (276), Expect = 3e-26
Identities = 66/169 (39%), Positives = 88/169 (52%), Gaps = 21/169 (12%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQL--ERVNVYYNEASCGR 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
+PRA +DLEP +D VRTG Y Q+ + G A NN+A+GHYT G E+ VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 432 RIRKLADQCTGLQ---------------------GFLIFHSFGGGTGSG 515
+RK A+ C LQ GF + HS GGGTGSG
Sbjct: 119 VVRKEAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQVCHSLGGGTGSG 167
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 113 bits (271), Expect = 1e-25
Identities = 64/164 (39%), Positives = 85/164 (51%), Gaps = 16/164 (9%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTG--TSPQQLERINVYFNEASGGR 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
H+PRA +DLEP +D +R+G + + G A NN+A+GHYT G E+ VLD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 432 RIRKLADQCTGLQ----------------GFLIFHSFGGGTGSG 515
+RK A+ C LQ GF + HS GGGTGSG
Sbjct: 119 VVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGGTGSG 162
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 105 bits (251), Expect = 3e-23
Identities = 57/149 (38%), Positives = 84/149 (56%), Gaps = 2/149 (1%)
Frame = +3
Query: 75 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 254
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 255 LPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*E--DAANNYARGHYTIGKEIDHLVL 428
+PRA VDLEP ++ ++ YR L + + + A NN+A G++ G+++ ++
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
Query: 429 DRIRKLADQCTGLQGFLIFHSFGGGTGSG 515
D I + AD L+GF++ HS GGTGSG
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSG 148
>07_01_0221 - 1635381-1637477
Length = 698
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 192 TIGGGDDSFNTFFSETGAGKHLPRAGFVDLEPTGVDEVRTGTYRQLVHS 338
T G G+D + F G +L G + TG+ E+ GT RQ H+
Sbjct: 22 TAGDGNDDDHQFVYSGFTGSNLTLDGAAVITRTGLLELTNGTLRQKAHA 70
>08_02_1566 +
27909297-27909390,27909542-27909645,27912899-27913098,
27913214-27913314,27913427-27914130,27914671-27914834,
27914941-27915100
Length = 508
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 366 AANNYARGHYTIGKEIDHLVLDRIRKLADQCTGLQGFL-IFHSFGGGTGSG 515
AA G Y + +++ L + + +LA +C GL+ FL + ++ GG G
Sbjct: 125 AATTNFYGRYDVSLDVNVLGVKHLCQLAKKCRGLKVFLHVSTAYAGGEQEG 175
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 28.3 bits (60), Expect = 3.9
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 402 QWCSDHGHSCWPHLP 358
++ S+HGHSCW +P
Sbjct: 26 RYISEHGHSCWSSVP 40
>09_02_0256 - 6350559-6350573,6351025-6351762
Length = 250
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 198 GGGDDSFNTFFSETGAGKHLPRAGFVDLEPTGVDEVRTGT 317
GGGDD + F E AG G V + P+G + T T
Sbjct: 39 GGGDDDWEAAFREFIAGDDDDDDGGVSMFPSGAGTMETTT 78
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 168 DGQMPTDKTIGGGDDSFNTFFSETGAGKHLPR 263
DG++PTD G D N S+ A + P+
Sbjct: 343 DGELPTDAAAQGADVDLNLRISQPAASQQSPK 374
>03_06_0700 + 35616619-35617069,35619123-35619502
Length = 276
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 268 PARGKCLPAPVSLK-KVLKESSPPPMVLSVG 179
P G LP PVS + +L +SPP LSVG
Sbjct: 14 PLPGASLPRPVSARVPLLPRASPPTWRLSVG 44
>10_02_0143 +
5795028-5795108,5795197-5795403,5795878-5795976,
5796136-5796224,5797876-5797992,5798262-5798367,
5798522-5798606,5798699-5798808,5799335-5799465,
5799686-5799782,5800310-5800603
Length = 471
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/70 (22%), Positives = 37/70 (52%)
Frame = +1
Query: 91 YTLAKPESRSVMPAGSFTAWSTAFSLMARCPQTRPSGVETILLTLSSARPELASTYPVLA 270
Y++ +PES S GSF W +++ P + P G++ + + +R S++ +L
Sbjct: 393 YSIVEPESASAATLGSF--WDVVPGALSKAP-SEP-GLKEMNSGQNGSRKTHGSSFSILM 448
Query: 271 SSILNLLVLM 300
+ ++ L+ ++
Sbjct: 449 AFVVLLIAVL 458
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 145 AWSTAFSLMARCPQTRPSGVETILLTLSSARPE 243
A A +RCPQ RPS + +L L ARP+
Sbjct: 960 ALRVALLCTSRCPQERPS-MREVLSMLQEARPK 991
>08_01_0009 +
68825-68950,72571-72669,72841-72929,74971-75087,
75747-75906,76419-76549,76810-76906,77584-77877
Length = 370
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/70 (22%), Positives = 37/70 (52%)
Frame = +1
Query: 91 YTLAKPESRSVMPAGSFTAWSTAFSLMARCPQTRPSGVETILLTLSSARPELASTYPVLA 270
Y++ +PES S GSF W +++ P + P G++ + + +R S++ +L
Sbjct: 292 YSIVEPESASAATLGSF--WDVVPGALSKAP-SEP-GLKEMNSGQNGSRKTHGSSFSILM 347
Query: 271 SSILNLLVLM 300
+ ++ L+ ++
Sbjct: 348 AFVVLLIAVL 357
>04_04_1189 +
31586991-31587291,31587358-31587397,31587449-31587534,
31587535-31588097,31588250-31589913,31589956-31590066,
31590152-31591181,31591234-31591406,31591535-31591814,
31592275-31592331
Length = 1434
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = -2
Query: 95 VYRDA--LTHFDLSFFLCLNVELNYNQSSF 12
VYRD + HFDL ++C++ N + S +
Sbjct: 306 VYRDQRIIDHFDLQIWICVSTNFNEDSSGW 335
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,772,807
Number of Sequences: 37544
Number of extensions: 429617
Number of successful extensions: 1445
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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