Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1792
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 275 1e-74
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 275 1e-74
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 275 1e-74
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 273 4e-74
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 249 1e-66
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 248 1e-66
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 248 1e-66
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 247 3e-66
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 247 3e-66
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 247 3e-66
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 242 9e-65
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 242 9e-65
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 229 9e-61
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 228 2e-60
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 208 1e-54
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 184 3e-47
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 138 3e-33
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 137 5e-33
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 136 7e-33
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 134 3e-32
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 134 3e-32
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 134 5e-32
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 118 2e-27
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 118 2e-27
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 78 3e-15
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 78 3e-15
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 29 2.6
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 28 3.4
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 28 3.4
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 28 3.4
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z74043-8|CAA98538.1| 368|Caenorhabditis elegans Hypothetical pr... 27 8.0
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 27 8.0
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 27 8.0
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 27 8.0
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 275 bits (675), Expect = 1e-74
Identities = 121/148 (81%), Positives = 135/148 (91%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
H+PRA VDLEPT +DE+RTGTYR L H +QLITG EDAANNYARGHYTIGKEI L LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
RIR+LAD CTGLQGFL+FHSFGGGTGSG
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSG 148
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 275 bits (675), Expect = 1e-74
Identities = 121/148 (81%), Positives = 135/148 (91%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
H+PRA VDLEPT +DE+RTGTYR L H +QLITG EDAANNYARGHYTIGKEI L LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
RIR+LAD CTGLQGFL+FHSFGGGTGSG
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSG 148
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 275 bits (675), Expect = 1e-74
Identities = 121/148 (81%), Positives = 135/148 (91%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
H+PRA VDLEPT +DE+RTGTYR L H +QLITG EDAANNYARGHYTIGKEI L LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
RIR+LAD CTGLQGFL+FHSFGGGTGSG
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSG 148
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 273 bits (670), Expect = 4e-74
Identities = 120/147 (81%), Positives = 134/147 (91%)
Frame = +3
Query: 75 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 254
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 255 LPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLDR 434
+PRA VDLEPT +DE+RTGTYR L H +QLITG EDAANNYARGHYTIGKEI L LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGSG 515
IR+LAD CTGLQGFL+FHSFGGGTGSG
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSG 147
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 249 bits (609), Expect = 1e-66
Identities = 109/149 (73%), Positives = 128/149 (85%)
Frame = +3
Query: 69 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 248
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 249 KHLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVL 428
KH+PRA VDLEPT +DE+RTGTY+ L H +QL+TG EDAANNYARGHYTIGKEI +V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 429 DRIRKLADQCTGLQGFLIFHSFGGGTGSG 515
DR+R+L + C GLQGFL+FHSFGGGTGSG
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSG 153
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 248 bits (608), Expect = 1e-66
Identities = 111/148 (75%), Positives = 129/148 (87%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PR+ FVDLEPT VDE+RTGTY++L H +Q+ITG EDAANNYARGHYT+GKE+ VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
RIR+LAD C+GLQGF +FHSFGGGTGSG
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSG 146
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 248 bits (608), Expect = 1e-66
Identities = 111/148 (75%), Positives = 129/148 (87%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PR+ FVDLEPT VDE+RTGTY++L H +Q+ITG EDAANNYARGHYT+GKE+ VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
RIR+LAD C+GLQGF +FHSFGGGTGSG
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSG 146
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 247 bits (605), Expect = 3e-66
Identities = 110/148 (74%), Positives = 129/148 (87%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PR+ FVDLEPT VDE+RTGTY++L H +Q+ITG EDAANNYARGHYT+GKE+ VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
RIR+LAD C+GLQGF +FHSFGGGTGSG
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSG 146
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 247 bits (605), Expect = 3e-66
Identities = 109/148 (73%), Positives = 127/148 (85%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
H+PRA FVDLEPT +DEVRTGTY +L H +QLI+G EDAANNYARGHYTIGKE+ +V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
R+R+L ++C LQGFLIFHSFGGGTGSG
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSG 148
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 247 bits (605), Expect = 3e-66
Identities = 110/148 (74%), Positives = 129/148 (87%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PR+ FVDLEPT VDE+RTGTY++L H +Q+ITG EDAANNYARGHYT+GKE+ VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
RIR+LAD C+GLQGF +FHSFGGGTGSG
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSG 146
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 242 bits (593), Expect = 9e-65
Identities = 108/148 (72%), Positives = 127/148 (85%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PR+ FVDLEPT VDE+RTG Y++L H +Q+ITG EDAANNYARGHYT+GKE+ LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
RIR+LAD C+GLQGF +FHSFGGGTGSG
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSG 146
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 242 bits (593), Expect = 9e-65
Identities = 108/148 (72%), Positives = 127/148 (85%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PR+ FVDLEPT VDE+RTG Y++L H +Q+ITG EDAANNYARGHYT+GKE+ LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
RIR+LAD C+GLQGF +FHSFGGGTGSG
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSG 146
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 229 bits (560), Expect = 9e-61
Identities = 104/148 (70%), Positives = 119/148 (80%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
H+PR+ FVDLEPT VDE+RTG Y++L H +Q++TG EDAANNYARGHYT+GKEI LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
RIR+LA+ C GLQGF +FHSFGGGTGSG
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSG 145
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 228 bits (557), Expect = 2e-60
Identities = 102/147 (69%), Positives = 120/147 (81%)
Frame = +3
Query: 75 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 254
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 255 LPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLDR 434
+PR FVDLEPT VDEVRTGTYR L H +QL++G EDAAN YARG YTIG+E+ +V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGSG 515
+++LA+ C GLQGF+IFHSFGGGTGSG
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSG 154
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 208 bits (509), Expect = 1e-54
Identities = 93/147 (63%), Positives = 111/147 (75%)
Frame = +3
Query: 75 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 254
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 255 LPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLDR 434
+PRA +VDLEPT +DE+R G Y L H Q+I G EDAANNYARGHYTIGKE+ +VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGSG 515
IRK + C GLQGFL+FHSFGGGTGSG
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSG 151
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 184 bits (448), Expect = 3e-47
Identities = 82/126 (65%), Positives = 100/126 (79%)
Frame = +3
Query: 138 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHLPRAGFVDLEPTGVDEVRTGT 317
++CLEHGIQPDG D T ++ NTFF+ET GKH+PR FVDLEPT VDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 318 YRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLDRIRKLADQCTGLQGFLIFHSFG 497
YR L H +QL++G EDAAN YARG YTIG+E+ +V+DR+++LA+ C GLQGF+IFHSFG
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 498 GGTGSG 515
GGTGSG
Sbjct: 121 GGTGSG 126
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 138 bits (333), Expect = 3e-33
Identities = 69/148 (46%), Positives = 89/148 (60%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PRA VDLEP +D VR+G + QL + G A NN+A+GHYT G E+ VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
+RK A+ C LQGF + HS GGGTGSG
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSG 146
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 137 bits (331), Expect = 5e-33
Identities = 69/148 (46%), Positives = 90/148 (60%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PRA VDLEP +D VR+G + QL + G A NN+A+GHYT G E+ VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
IRK A+ C LQGF + HS GGGTGSG
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSG 146
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 136 bits (330), Expect = 7e-33
Identities = 69/148 (46%), Positives = 90/148 (60%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PRA VDLEP +D VR+G + QL + G A NN+A+GHYT G E+ VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
IRK A+ C LQGF + HS GGGTGSG
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSG 146
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 134 bits (325), Expect = 3e-32
Identities = 67/148 (45%), Positives = 89/148 (60%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PRA VDLEP +D VR+G + QL + G A NN+A+GHYT G E+ VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
+RK A+ LQGF + HS GGGTGSG
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSG 146
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 134 bits (325), Expect = 3e-32
Identities = 67/148 (45%), Positives = 89/148 (60%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PRA VDLEP +D VR+G + QL + G A NN+A+GHYT G E+ VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
+RK A+ LQGF + HS GGGTGSG
Sbjct: 119 VVRKEAESTDCLQGFQLTHSLGGGTGSG 146
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 134 bits (323), Expect = 5e-32
Identities = 67/148 (45%), Positives = 86/148 (58%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PRA VDLEP +D VR G + QL + G A NN+A+GHYT G E+ VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
+RK A+ C LQGF + HS GGGTGSG
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSG 146
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 118 bits (284), Expect = 2e-27
Identities = 61/148 (41%), Positives = 85/148 (57%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PRA VDL+P ++ VR+ Y +L + ++G A NN++RG+Y G EI VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
IR+ A+ L+GF + HS GGGTGSG
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSG 146
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 118 bits (284), Expect = 2e-27
Identities = 61/148 (41%), Positives = 85/148 (57%)
Frame = +3
Query: 72 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 251
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 252 HLPRAGFVDLEPTGVDEVRTGTYRQLVHSQQLITG*EDAANNYARGHYTIGKEIDHLVLD 431
++PRA VDL+P ++ VR+ Y +L + ++G A NN++RG+Y G EI VL
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLS 118
Query: 432 RIRKLADQCTGLQGFLIFHSFGGGTGSG 515
IR+ A+ L+GF + HS GGGTGSG
Sbjct: 119 VIRREAEAADSLEGFQLIHSLGGGTGSG 146
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 78.2 bits (184), Expect = 3e-15
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Frame = +3
Query: 84 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHLPR 263
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + ++PR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 264 AGFVDLEPTGVDEV-RTGTYRQLVHSQQLITG*ED--AANNYARGHYTIGKEIDHLVLDR 434
A VDLEP ++ + ++ + L ++ + A NN+A G Y G+E+ ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGSG 515
I + A+ L G L HS GGTGSG
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSG 150
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 78.2 bits (184), Expect = 3e-15
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Frame = +3
Query: 84 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHLPR 263
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + ++PR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 264 AGFVDLEPTGVDEV-RTGTYRQLVHSQQLITG*ED--AANNYARGHYTIGKEIDHLVLDR 434
A VDLEP ++ + ++ + L ++ + A NN+A G Y G+E+ ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 435 IRKLADQCTGLQGFLIFHSFGGGTGSG 515
I + A+ L G L HS GGTGSG
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSG 150
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +1
Query: 100 AKPESRSVMPAGSFTAWSTAFSLMARCPQTRPSGVETILLTLSSARPELAST 255
A P MP+ S + S++ S M + P+ PS ++T+L ++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 114 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHLPRAGFVDLEPTG 293
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 294 VDE 302
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 114 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHLPRAGFVDLEPTG 293
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 294 VDE 302
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +3
Query: 114 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHLPRAGFVDLEPTG 293
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 294 VDE 302
DE
Sbjct: 116 ADE 118
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -3
Query: 313 PVRTSSTPVGSRSTKPARGKCLPAPVSLKKVLKESSPPP 197
P+RTSS PV S T P+R +P P K PPP
Sbjct: 1487 PIRTSS-PVPSTQTTPSRPPQMPPPPPASG--KTIPPPP 1522
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -3
Query: 313 PVRTSSTPVGSRSTKPARGKCLPAPVSLKKVLKESSPPP 197
P+RTSS PV S T P+R +P P K PPP
Sbjct: 1487 PIRTSS-PVPSTQTTPSRPPQMPPPPPASG--KTIPPPP 1522
>Z74043-8|CAA98538.1| 368|Caenorhabditis elegans Hypothetical
protein T19B10.6 protein.
Length = 368
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 450 QRACGFCPKPNDRFPFQWCSDHGHSC 373
+R+C P PNDR W S H SC
Sbjct: 162 KRSCNRAPGPNDR----WWSQHQQSC 183
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform a protein.
Length = 2560
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -3
Query: 313 PVRTSSTPVGSRSTKPARGKCLPAPVSLKKVLKESSPPPMVLSVGIWPSG*MPCS 149
P R P S T+ A+ K P P S KK P++ +V + PCS
Sbjct: 457 PPRRGQEPTESSKTRKAQVK--PTPTSEKKKESRELQKPIIATVQVPTESSHPCS 509
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -3
Query: 313 PVRTSSTPVGSRSTKPARGKCLPAPVSLKKVLKESSPPPMVLSVGIWPSG*MPCS 149
P R P S T+ A+ K P P S KK P++ +V + PCS
Sbjct: 399 PPRRGQEPTESSKTRKAQVK--PTPTSEKKKESRELQKPIIATVQVPTESSHPCS 451
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -3
Query: 313 PVRTSSTPVGSRSTKPARGKCLPAPVSLKKVLKESSPPPMVLSVGIWPSG*MPCS 149
P R P S T+ A+ K P P S KK P++ +V + PCS
Sbjct: 581 PPRRGQEPTESSKTRKAQVK--PTPTSEKKKESRELQKPIIATVQVPTESSHPCS 633
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,377,597
Number of Sequences: 27780
Number of extensions: 314416
Number of successful extensions: 937
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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