Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1792
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.35 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.35 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        24   1.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        24   1.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        24   1.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.3  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 465 LQGFLIFHSFGGGTGSG 515
           L+G +I HS+GGG G G
Sbjct: 656 LRGSIIDHSYGGGFGFG 672


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 465 LQGFLIFHSFGGGTGSG 515
           L+G +I HS+GGG G G
Sbjct: 694 LRGSIIDHSYGGGFGFG 710


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 198 RWSCLWASGHQAECRAPGSKAPSRHYR 118
           RW C W+ G   +C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 198 RWSCLWASGHQAECRAPGSKAPSRHYR 118
           RW C W+ G   +C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 198 RWSCLWASGHQAECRAPGSKAPSRHYR 118
           RW C W+ G   +C+A    A SR  R
Sbjct: 387 RW-CTWSEGDLEKCKALTRAAYSRDVR 412


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 135 PSRHYRSGLR 106
           P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 502 PPPKEWKIRNPC 467
           PPP++WK  + C
Sbjct: 416 PPPEDWKPLDKC 427


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,312
Number of Sequences: 438
Number of extensions: 4155
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)