Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1791
         (701 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113513-1|AAM29518.1|  414|Drosophila melanogaster RE59473p pro...   117   2e-26
AF247183-1|AAG18016.1|  414|Drosophila melanogaster BVES protein.     117   2e-26
AE014298-3082|AAS65416.1|  414|Drosophila melanogaster CG32513-P...   117   2e-26
AE014298-3081|AAF50859.2|  414|Drosophila melanogaster CG32513-P...   117   2e-26
AY119506-1|AAM50160.1|  704|Drosophila melanogaster GH12423p pro...    29   8.1  
AE014296-3274|AAF49073.2|  704|Drosophila melanogaster CG14186-P...    29   8.1  

>AY113513-1|AAM29518.1|  414|Drosophila melanogaster RE59473p
           protein.
          Length = 414

 Score =  117 bits (281), Expect = 2e-26
 Identities = 64/91 (70%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
 Frame = +3

Query: 366 VSIMAMEESRVLVWHRDKLKLSIMSDAFLQAVFDHILGRDVVHKLM---QVSETMAVSNG 536
           VSIMAMEESRVL+WHRDKLKLSIM++ FLQ VFDHILGRDVV KLM   QVSE++A SNG
Sbjct: 271 VSIMAMEESRVLIWHRDKLKLSIMAEPFLQTVFDHILGRDVVKKLMQVTQVSESIA-SNG 329

Query: 537 HLPNS--YEEGEDKPMLVVKKAGD-GPGITA 620
            LP+    E+ EDKPML++KK+ D G G+TA
Sbjct: 330 FLPSGGYAEDAEDKPMLILKKSVDVGHGLTA 360


>AF247183-1|AAG18016.1|  414|Drosophila melanogaster BVES protein.
          Length = 414

 Score =  117 bits (281), Expect = 2e-26
 Identities = 64/91 (70%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
 Frame = +3

Query: 366 VSIMAMEESRVLVWHRDKLKLSIMSDAFLQAVFDHILGRDVVHKLM---QVSETMAVSNG 536
           VSIMAMEESRVL+WHRDKLKLSIM++ FLQ VFDHILGRDVV KLM   QVSE++A SNG
Sbjct: 271 VSIMAMEESRVLIWHRDKLKLSIMAEPFLQTVFDHILGRDVVKKLMQVTQVSESIA-SNG 329

Query: 537 HLPNS--YEEGEDKPMLVVKKAGD-GPGITA 620
            LP+    E+ EDKPML++KK+ D G G+TA
Sbjct: 330 FLPSGGYAEDAEDKPMLILKKSVDVGHGLTA 360


>AE014298-3082|AAS65416.1|  414|Drosophila melanogaster CG32513-PB,
           isoform B protein.
          Length = 414

 Score =  117 bits (281), Expect = 2e-26
 Identities = 64/91 (70%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
 Frame = +3

Query: 366 VSIMAMEESRVLVWHRDKLKLSIMSDAFLQAVFDHILGRDVVHKLM---QVSETMAVSNG 536
           VSIMAMEESRVL+WHRDKLKLSIM++ FLQ VFDHILGRDVV KLM   QVSE++A SNG
Sbjct: 271 VSIMAMEESRVLIWHRDKLKLSIMAEPFLQTVFDHILGRDVVKKLMQVTQVSESIA-SNG 329

Query: 537 HLPNS--YEEGEDKPMLVVKKAGD-GPGITA 620
            LP+    E+ EDKPML++KK+ D G G+TA
Sbjct: 330 FLPSGGYAEDAEDKPMLILKKSVDVGHGLTA 360


>AE014298-3081|AAF50859.2|  414|Drosophila melanogaster CG32513-PA,
           isoform A protein.
          Length = 414

 Score =  117 bits (281), Expect = 2e-26
 Identities = 64/91 (70%), Positives = 75/91 (82%), Gaps = 6/91 (6%)
 Frame = +3

Query: 366 VSIMAMEESRVLVWHRDKLKLSIMSDAFLQAVFDHILGRDVVHKLM---QVSETMAVSNG 536
           VSIMAMEESRVL+WHRDKLKLSIM++ FLQ VFDHILGRDVV KLM   QVSE++A SNG
Sbjct: 271 VSIMAMEESRVLIWHRDKLKLSIMAEPFLQTVFDHILGRDVVKKLMQVTQVSESIA-SNG 329

Query: 537 HLPNS--YEEGEDKPMLVVKKAGD-GPGITA 620
            LP+    E+ EDKPML++KK+ D G G+TA
Sbjct: 330 FLPSGGYAEDAEDKPMLILKKSVDVGHGLTA 360


>AY119506-1|AAM50160.1|  704|Drosophila melanogaster GH12423p
           protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 513 ETMAVSNGHLPNSYEEGEDKPMLVVKKAGDGP 608
           +T+ + NGH P   EEGE++  L      D P
Sbjct: 94  QTVVLVNGHAPPGQEEGEEESPLGAGNTRDSP 125


>AE014296-3274|AAF49073.2|  704|Drosophila melanogaster CG14186-PA
           protein.
          Length = 704

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 513 ETMAVSNGHLPNSYEEGEDKPMLVVKKAGDGP 608
           +T+ + NGH P   EEGE++  L      D P
Sbjct: 94  QTVVLVNGHAPPGQEEGEEESPLGAGNTRDSP 125


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,853,309
Number of Sequences: 53049
Number of extensions: 543771
Number of successful extensions: 1361
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)