Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1791
         (701 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin prepr...    26   0.40 
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    24   1.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   4.9  

>AB201717-1|BAD90662.1|  107|Apis mellifera apime-corazonin
           preprohormone protein.
          Length = 107

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 569 VLSLFIAVREVTVADCHRFAYLHQFVNHVPSEDMIE 462
           +L LFI    +T+  C  F Y H + N   S  + E
Sbjct: 6   ILILFILSLTITIVMCQTFTYSHGWTNGKRSTSLEE 41


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +2

Query: 146 NFFAYCLFSYL 178
           NF AYCLFS+L
Sbjct: 144 NFKAYCLFSFL 154


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +1

Query: 457 RSSIISSDGTWFTN*CR*AK--RWQSATVTSLTAMKRERTSRC 579
           RS+I+ S+ +   N    ++  R + AT TSL A KRE++  C
Sbjct: 742 RSAIVHSEASANANSSTSSEESREEKAT-TSLEAEKREKSEHC 783


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,277
Number of Sequences: 438
Number of extensions: 3486
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)