Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1788
(672 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces ... 125 7e-30
SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces pom... 122 6e-29
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 92 6e-20
SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity ... 68 1e-12
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 35 0.012
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 31 0.15
SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces ... 29 0.46
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 28 1.4
SPAC1782.11 |met14||adenylyl-sulfate kinase |Schizosaccharomyces... 27 1.9
SPCC188.06c |srp54||signal recognition particle subunit Srp54|Sc... 26 4.3
SPAC4D7.12c |fet5||transcription factor Fet5|Schizosaccharomyces... 26 4.3
SPBC17D1.03c |||exosome subunit Rrp43 |Schizosaccharomyces pombe... 26 5.7
SPBC1685.13 |||non classical export pathway protein |Schizosacch... 25 7.5
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 25 7.5
>SPAPB17E12.14c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 125 bits (301), Expect = 7e-30
Identities = 65/151 (43%), Positives = 92/151 (60%), Gaps = 2/151 (1%)
Frame = +2
Query: 191 MVGLPARGKTYISKKLSRYLNWIGINTRVFNLGEYRR-HATSAYTSHEFFRADNKEAMAI 367
MVGLPARGK+YI KL RY NW+ N + FN+G +RR HA+ ++ FF N+EA +
Sbjct: 1 MVGLPARGKSYIVNKLVRYYNWLQYNCKAFNVGNFRRKHASHSHDDASFFDPSNEEASKL 60
Query: 368 RQKCALDALQDVCEWL-TKGGEVAVFDATNSTLDRRRMIRDLVVHKMGFKLFFVESICDD 544
R+ A+D L + +W + G V +FDATNST RR+ I D + F+ESIC+D
Sbjct: 61 RESFAMDTLDALLQWFEEEDGVVGIFDATNSTSKRRKAIVDHLSKVPYVTTLFIESICND 120
Query: 545 PRIIEQNIMEVKVSSPDYTNIQNTDNVLNDF 637
++I N M +K+ PDY ++ N + L DF
Sbjct: 121 EQLIAAN-MRMKLVGPDYKDL-NPEQSLRDF 149
>SPAC222.13c |||6-phosphofructo-2-kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 592
Score = 122 bits (293), Expect = 6e-29
Identities = 60/154 (38%), Positives = 95/154 (61%), Gaps = 3/154 (1%)
Frame = +2
Query: 182 VIAMVGLPARGKTYISKKLSRYLNWIGINTRVFNLGEYRR-HATSAYT-SHEFFRADNKE 355
+I +VG+PA GK+YI KLSRY NW+ N R F++G+ RR S Y+ S +FF N+E
Sbjct: 145 IIILVGIPATGKSYIGSKLSRYYNWLKYNCRFFSVGDKRREEGASTYSMSADFFDIKNEE 204
Query: 356 AMAIRQKCALDALQDVCEWLT-KGGEVAVFDATNSTLDRRRMIRDLVVHKMGFKLFFVES 532
R+ AL+ L+D+ W+ + G + + DATNST +RR+ + D + + + F+ES
Sbjct: 205 TFKFRENVALETLEDLLHWMIHENGVIGILDATNSTHERRKHLYDRISKEADIGIMFLES 264
Query: 533 ICDDPRIIEQNIMEVKVSSPDYTNIQNTDNVLND 634
+C D + E+NI ++K+ PDY +T++ L D
Sbjct: 265 LCTDDILFEENI-KLKIKGPDYEG-YDTESALKD 296
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 92.3 bits (219), Expect = 6e-20
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Frame = +2
Query: 182 VIAMVGLPARGKTYISKKLSRYLNWIGINTRVFNLGEYRRHATSAYTSHEFFRADNKEAM 361
VI M GLPARGK+ I+ + RYL W+G N R ++L +Y T TS A ++ +
Sbjct: 54 VIIMSGLPARGKSNIAVSIDRYLRWLGFNCRFYSLAKYIDERTREMTSSPVKSAASENHV 113
Query: 362 AIRQKCALDALQDVCEWLTK-GGEVAVFDATNSTLDRRRMIRDLVVHKMGFKLFFVESIC 538
R L D+ +L K G+VA++DATN T RR++ D GFK+ F+ES+C
Sbjct: 114 FSRNDTIERCLADLEIFLLKEKGQVAIYDATNGTRRTRRILYDR-FKNCGFKILFIESLC 172
Query: 539 DDPRIIEQNIMEVKVSSPDYTN 604
+ +I NI E S ++ N
Sbjct: 173 NKEDVINANIQEAIHVSEEFRN 194
>SPAC732.02c |||fructose-2,6-bisphosphate 2-phosphatase activity
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 67.7 bits (158), Expect = 1e-12
Identities = 46/155 (29%), Positives = 77/155 (49%), Gaps = 3/155 (1%)
Frame = +2
Query: 185 IAMVGLPARGKTYISKKLSRYLNWIGINTRVFNLGEYRRHATSAYTSHEFFRADNKEAMA 364
+ VGLPA GKT + KLSRYL W+ ++T +++ E + S + E +A
Sbjct: 12 VCFVGLPASGKTSSAMKLSRYLTWMSVSTHLYDTKEIDNSLSENSNS-------DSENLA 64
Query: 365 IRQKCALDALQDVCEWLTKGGEVAVFDATNSTLDRRRMIRDLVVHKMGFKLFFVESICDD 544
D L+ V KG +VA+ D TL R+ I +L + L FVE +C +
Sbjct: 65 KTLSPIFDNLESV---FKKGTDVAILDFNQCTLKFRKSIVELAKAR-NMLLMFVEVVCTN 120
Query: 545 PRIIEQNIMEVKVSSPDYTNI---QNTDNVLNDFH 640
+II++NI ++ SP + + ++ + +L+ H
Sbjct: 121 QKIIDENITDMCQHSPYFKSFPFEESKNKILDSIH 155
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 34.7 bits (76), Expect = 0.012
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 371 QKCALDALQDVCEWLTKGGEVAVFDATNSTLDRRRMIRDLVVHKMGFKLF 520
++ LDA++DV EWL GE DA+ + +R D VVH + KL+
Sbjct: 596 KQAVLDAVEDVAEWLEIHGE----DASKEEFEDQRQKLDAVVHPITQKLY 641
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1811
Score = 31.1 bits (67), Expect = 0.15
Identities = 22/84 (26%), Positives = 37/84 (44%)
Frame = +2
Query: 293 YRRHATSAYTSHEFFRADNKEAMAIRQKCALDALQDVCEWLTKGGEVAVFDATNSTLDRR 472
+R H S + S F++ +I KC L L C W E+ D + + +R
Sbjct: 1591 FRPHEISRFNSQSVFKSKKHHLKSIVVKCTLQLLMLNCLW-----ELFHSDNMLTNIPKR 1645
Query: 473 RMIRDLVVHKMGFKLFFVESICDD 544
+M++ L + K ++ F ES D
Sbjct: 1646 KMVKLLDILKQSWE--FAESFNSD 1667
>SPAC144.14 |klp8||kinesin-like protein Klp8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 511
Score = 29.5 bits (63), Expect = 0.46
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = -3
Query: 331 LMACVCGCSMSSVFA*IKYSCIDPYPVQVA*QFLGNVCLPSCRETHHCDNMRYV-DIIRS 155
++ CV C F+ ++YS A + + N+ +C+E + +N + DI+ +
Sbjct: 331 MLTCVSPCDFDDTFSALRYS--------EAARRIKNISNINCKEAYSTNNEGELDDILTT 382
Query: 154 FSSDRERFRHNSLTSRR 104
SDRE+ R + S++
Sbjct: 383 LESDREQLRRHEEHSQK 399
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 27.9 bits (59), Expect = 1.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -3
Query: 556 NNPRVITYRFNKEKLEAHLVDYKVSYHPPSVQSRICSIEDGDFSAFGQPFT 404
+NP +RF EK+ + +K+S Q + G+FSAF P+T
Sbjct: 216 SNPATDAHRF--EKISNIVKQFKLSCSKMQAQFTTFELRGGNFSAFIVPYT 264
>SPAC1782.11 |met14||adenylyl-sulfate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 27.5 bits (58), Expect = 1.9
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 152 ERSNYVNIPHV-IAMVGLPARGKTYISKKLSRYLNWIGINT 271
ER +V P + I M GL A GK+ I+ L +YL G+ T
Sbjct: 16 ERIKFVGHPGMTIWMTGLSASGKSTIACALEQYLLQRGVTT 56
>SPCC188.06c |srp54||signal recognition particle subunit
Srp54|Schizosaccharomyces pombe|chr 3|||Manual
Length = 522
Score = 26.2 bits (55), Expect = 4.3
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 176 PHVIAMVGLPARGKTYISKKLSRYLNWIGINTRVFNLGEYRRHA 307
P VI MVGL GKT KL+ + G+ + + +R A
Sbjct: 101 PSVIMMVGLQGSGKTTTCSKLALHYQRRGLKSCLVAADTFRAGA 144
>SPAC4D7.12c |fet5||transcription factor Fet5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 276
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 5 LRLRGGINNNSDSKKHELNQC 67
L L G IN ++ K HELN+C
Sbjct: 198 LLLTGEINETTNPKFHELNRC 218
>SPBC17D1.03c |||exosome subunit Rrp43 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 270
Score = 25.8 bits (54), Expect = 5.7
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 369 LIAMASL-LSALKNSWLVYADVACLLY 292
LI + SL + K +W++YAD+ CL Y
Sbjct: 130 LINLQSLCIFEKKAAWVLYADIICLNY 156
>SPBC1685.13 |||non classical export pathway protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 183
Score = 25.4 bits (53), Expect = 7.5
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 229 GNVCLPSCRETHHCDNMRYVD 167
G C+ H CDN +Y+D
Sbjct: 92 GGCCIAVAIRVHACDNQKYLD 112
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 25.4 bits (53), Expect = 7.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 504 WASSFSLLNLYVMTLGLLNK 563
W S+F + N+Y +G+LN+
Sbjct: 376 WLSNFDMENVYYKLIGILNR 395
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,738,808
Number of Sequences: 5004
Number of extensions: 55894
Number of successful extensions: 210
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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