Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1785
(701 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316... 38 0.006
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56... 38 0.010
01_05_0299 - 20595919-20595963,20596111-20596221,20596901-205969... 34 0.095
01_06_1123 + 34671365-34671883,34672366-34672625,34673045-346731... 32 0.38
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 31 0.67
06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176 31 0.67
01_06_1792 - 39912714-39913559 31 0.67
07_03_0325 - 16809700-16809774,16810262-16810316,16810467-168107... 30 1.5
05_04_0454 + 21383068-21384525 30 2.0
01_06_1793 - 39916024-39916824 30 2.0
11_06_0637 + 25715516-25716459,25718196-25718355 29 3.6
07_03_1053 - 23600983-23601550,23601947-23602105,23602192-236023... 29 3.6
07_01_0182 + 1280479-1280754,1281232-1282089 29 3.6
03_02_0362 - 7809752-7810357,7811018-7811914 29 3.6
01_01_0562 + 4126368-4128196,4128517-4128715,4128827-4128886,412... 29 4.7
10_07_0175 - 13817381-13817782,13817878-13818131,13818308-13818335 28 6.2
10_07_0167 + 13756200-13756227,13756401-13756561,13756754-13757317 28 6.2
01_06_0747 - 31645136-31646521,31647870-31648142,31649080-316491... 28 6.2
01_01_0740 - 5756491-5757054,5757247-5757407,5757580-5757607 28 6.2
10_05_0011 - 7822847-7822880,7823653-7823754,7823859-7824106,782... 28 8.3
06_03_0551 - 22027441-22028224,22029015-22029344,22029510-220297... 28 8.3
02_03_0218 + 16526082-16526375,16526606-16526725,16528078-165282... 28 8.3
01_05_0335 + 21074117-21074241,21074299-21074929,21075359-210753... 28 8.3
>03_06_0656 -
35330109-35331011,35331154-35331360,35331455-35331632,
35331726-35332221,35332889-35333033
Length = 642
Score = 38.3 bits (85), Expect = 0.006
Identities = 34/137 (24%), Positives = 53/137 (38%), Gaps = 12/137 (8%)
Frame = +2
Query: 269 NMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKN-----NF 433
++ KN N DY+ N G N+ GG + + N +NG Q N ++
Sbjct: 48 DVKGKNNGQENGSGGRNYDYDYYNRGYSNNNGGYQNYNYNGNNSNGYQNYNYNGNGQGHY 107
Query: 434 NGDKSP---GNMQYGNK----NDFGGPKQQNYNKNYGPKTYNNQNCYGNEQPEFIPRQSY 592
NG P GN QY N D+G Q N N G + N Y + ++ P++
Sbjct: 108 NGGYQPIHQGNGQYQNNGNYHGDYGYDGQYAENYNNGQRQVYNGGQYRKKNLQYRPKEKQ 167
Query: 593 SPNSVQHSLNDRKLQSK 643
+ + K + K
Sbjct: 168 LSETASACSAENKSEDK 184
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 4/94 (4%)
Frame = +2
Query: 290 RPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRP---RNNFNN-GNQPPKKNNFNGDKSPGN 457
R F + D++ + GN GG ++ R + GN ++ +NG+ + G
Sbjct: 385 RGNGGFRQNSRDHSAEPHGNARGNGGYQERRDIGYNGGYQGRGNGGYQQRGYNGNNNGGY 444
Query: 458 MQYGNKNDFGGPKQQNYNKNYGPKTYNNQNCYGN 559
Q G + G QQ N G Y G+
Sbjct: 445 QQRGYNGNNNGRFQQERAVNSGNGGYRQGGYRGD 478
>08_01_0080 +
566509-566746,566904-567151,567347-567532,567639-567734,
567836-567907,567990-568106,570531-571676
Length = 700
Score = 37.5 bits (83), Expect = 0.010
Identities = 24/68 (35%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Frame = +2
Query: 407 NQPPKKNNFNGDKSPGNMQYGNKNDFGGPKQQNYNKNYGPKTYN----NQNCYGNEQPEF 574
N PP N+N YG QNY YG YN NQ YG QP
Sbjct: 423 NYPPGPGNYNSYGPSQGPNYGQPQYPQSAPPQNYGPGYGDPRYNAPAPNQQYYG--QPPA 480
Query: 575 IPRQSYSP 598
P+Q Y P
Sbjct: 481 GPQQGYPP 488
Score = 29.5 bits (63), Expect = 2.7
Identities = 29/109 (26%), Positives = 39/109 (35%), Gaps = 7/109 (6%)
Frame = +2
Query: 230 PDFGGPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRN-NFNNG 406
P +G P+ P PN P + Y + D +GGP Q+ PR +G
Sbjct: 458 PGYGDPRYNAPAPNQQYYGQPPAGP----QQGYPPQQDPYARPYGGPGQWAPRGAPAGDG 513
Query: 407 N---QPPKKNNFNGDKSPGNMQ-YGNKNDFGGPKQQNYNKN--YGPKTY 535
PP + P Q YG G QQ+Y + P TY
Sbjct: 514 TYQAPPPTSYGPPSQQPPAYGQTYGPTTGPDGYSQQSYPQQGAQAPATY 562
>01_05_0299 -
20595919-20595963,20596111-20596221,20596901-20596984,
20597350-20597450,20597584-20598301
Length = 352
Score = 34.3 bits (75), Expect = 0.095
Identities = 25/90 (27%), Positives = 40/90 (44%)
Frame = +2
Query: 248 KNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKN 427
K++G + N N FN++ YN ++G N +GG ++ FN P N
Sbjct: 106 KSYGGAAKINNNNVNAFG-FNKM-GGYNNSSNGGGN-YGG-NGGDVKSYFNKSVGRPASN 161
Query: 428 NFNGDKSPGNMQYGNKNDFGGPKQQNYNKN 517
N N + + G YG K G ++ + KN
Sbjct: 162 NNNNNSNGGGGYYGKKGGDGAGGKKKHAKN 191
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/74 (28%), Positives = 29/74 (39%)
Frame = +2
Query: 338 NDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKNDFGGPKQQNYNKN 517
N+ N +GG + NN N K +N + G GN GG + +NK+
Sbjct: 101 NNNNNKSYGGAAKIN--NNNVNAFGFNKMGGYNNSSNGGGNYGGN----GGDVKSYFNKS 154
Query: 518 YGPKTYNNQNCYGN 559
G NN N N
Sbjct: 155 VGRPASNNNNNNSN 168
>01_06_1123 + 34671365-34671883,34672366-34672625,34673045-34673143,
34673237-34675178,34675588-34675658,34676158-34676307,
34676963-34677038,34677131-34677232,34677707-34677855,
34678214-34678364
Length = 1172
Score = 32.3 bits (70), Expect = 0.38
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Frame = +2
Query: 320 NDYNTKNDGNQNDFGGPKQFRPRNNFNNGN---QPPKK-------NNFNGDKSPGNMQYG 469
++ T+N N G + R R+ +N G+ QPP K N ++ + + N +
Sbjct: 696 SETGTRNANNNQ--GSFSESRDRSTYNRGSHSAQPPYKSGYGNNNNAWSSNNNGSNNAWS 753
Query: 470 NKNDFGGPKQQNYNKNYGPKTYNNQNCYGNEQPEFIPRQSYSPNSVQHS 616
+ D+ + + N Y T+++ + Y N + SY+ NS S
Sbjct: 754 STRDYDNGGRSDNNPYYNSSTWSSNSTYSN-NAAWSSNSSYNSNSAWSS 801
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Frame = +2
Query: 317 KNDY-NTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKNDFGGP 493
K+ Y N N + N+ G + +++NG + +N N Y N +
Sbjct: 731 KSGYGNNNNAWSSNNNGSNNAWSSTRDYDNGGRSDNNPYYNSSTWSSNSTYSNNAAWSSN 790
Query: 494 KQQNYNKNYGP-KTYNNQNCYGN 559
N N + +YN+ + + N
Sbjct: 791 SSYNSNSAWSSNSSYNSNSAWSN 813
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 31.5 bits (68), Expect = 0.67
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +2
Query: 260 PRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNG 439
P PN N++P + +Y + G GGP ++ N G PP + + G
Sbjct: 275 PPPNAGPPNYQPHAPNPQGYTNY--QQGGAPGYQGGPPGYQGSNQGYQGPPPPPPSAYQG 332
Query: 440 DKSPGNMQYGNKNDFGG--PKQQNYNKNYGP 526
+ +PG Q G GG P Q N Y P
Sbjct: 333 N-NPG-YQGGGPGYQGGNPPPYQGGNPGYAP 361
>06_01_1132 + 9346372-9346429,9347314-9348179,9348817-9349176
Length = 427
Score = 31.5 bits (68), Expect = 0.67
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 389 NNFNNGNQPPKKNNFNGDKSPGNMQYGNKNDFGGPKQQNYNKNYGPKTYNNQN-CYG-NE 562
NN NN N +N N + S M +G +++ YN Y + NNQ+ YG +E
Sbjct: 186 NNNNNNNDNDNNDNNNSNSSNNGMYFGEVDEYF--DLVGYNSYYDNRIENNQDRQYGMHE 243
Query: 563 QPE 571
Q E
Sbjct: 244 QQE 246
>01_06_1792 - 39912714-39913559
Length = 281
Score = 31.5 bits (68), Expect = 0.67
Identities = 22/98 (22%), Positives = 39/98 (39%)
Frame = +2
Query: 239 GGPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPP 418
GG ++ P +K D+ + N N+G+ +D K ++ + ++
Sbjct: 24 GGRRSSSPPRGAGDKKETKTKDYQSYTS--NNNNNGSDDDKDKNKHKITSSHKHKDDEKD 81
Query: 419 KKNNFNGDKSPGNMQYGNKNDFGGPKQQNYNKNYGPKT 532
+ N+ GN NK+ +GG N N YG T
Sbjct: 82 RNNHSKDSHGGGNSSNYNKDSYGG-NSGNPNNYYGSST 118
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Frame = +2
Query: 389 NNFNNGNQPPKKNN----FNGDKSPGNMQYGN---KNDFGGPKQQNYNK-NYGPKTYNNQ 544
NN NNG+ K N + K + + N K+ GG NYNK +YG + N
Sbjct: 52 NNNNNGSDDDKDKNKHKITSSHKHKDDEKDRNNHSKDSHGGGNSSNYNKDSYGGNSGNPN 111
Query: 545 NCYGN 559
N YG+
Sbjct: 112 NYYGS 116
>07_03_0325 -
16809700-16809774,16810262-16810316,16810467-16810737,
16810944-16811079,16812261-16812353,16813019-16813063,
16813409-16813543
Length = 269
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 170 FRPQPDRNEQFGKIPYIKGLPDFGGPKNFGPRP-NMMNKNFRPRNDFNEVKNDYNTKNDG 346
+R + D+N++ + +G PKN G RP + NFR R F +D +
Sbjct: 93 WRDEDDKNDESSGPSWFRGHRWVRNPKNNGFRPHDFYFGNFRSRGGFEFCTSDEDEPETV 152
Query: 347 NQNDFGGPKQF 379
+N F G + F
Sbjct: 153 FRNAFRGQQTF 163
>05_04_0454 + 21383068-21384525
Length = 485
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +2
Query: 383 PRNNFNNGNQPPKKNNFNGDKSPGNMQYGNK--NDFGGPKQQNYNKNYGPKTYNNQN 547
PRNN NN + P++ G K G+ Q G + N++ ++Q Y + N N
Sbjct: 250 PRNNNNNNRRRPRRPMRQGYKYNGHDQRGQQQVNNYSHGQRQVYGNGQDQRQQLNNN 306
>01_06_1793 - 39916024-39916824
Length = 266
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/75 (26%), Positives = 27/75 (36%), Gaps = 1/75 (1%)
Frame = +2
Query: 320 NDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNN-FNGDKSPGNMQYGNKNDFGGPK 496
+ Y +DG + D NN + P N +N G YGN +GG
Sbjct: 96 SSYKYDDDGGERDRSYSNYGGYGNNEGYSSSAPSGYNPYNNGGGYGGPSYGNGGGYGGST 155
Query: 497 QQNYNKNYGPKTYNN 541
N YG +Y N
Sbjct: 156 YGN-GGGYGGSSYGN 169
>11_06_0637 + 25715516-25716459,25718196-25718355
Length = 367
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 512 CYNFVV*DRQNHFYCHIAYFLVICLH*SCFSLVVG 408
C+ ++ + ++HFY IA FLV+ FS+V G
Sbjct: 242 CFLLLLIEEESHFYTIIAVFLVVAALPLFFSIVFG 276
>07_03_1053 -
23600983-23601550,23601947-23602105,23602192-23602357,
23602959-23603502,23604506-23604679,23605740-23605985
Length = 618
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 140 YNGFHNQHPIFRPQPDRNEQFGKIPYIKGLPDFGG 244
Y G HN HP +PQP+R G +P I+G + G
Sbjct: 285 YKGRHN-HP--KPQPNRRLSAGAVPPIQGEERYDG 316
>07_01_0182 + 1280479-1280754,1281232-1282089
Length = 377
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +2
Query: 413 PPKKNNFNGDKSPGNMQYGNKND--FGGPKQQNYNKNYGPKTYNNQNCYGNEQPEFIPRQ 586
P + + + G+ +G + F GP Q YN YG YN+ N P+ +P
Sbjct: 221 PKDASYYRNGRGRGSRNFGGRGHAGFDGPSYQPYNDRYG--FYNSYN-----MPQPVPPH 273
Query: 587 SYSP 598
Y P
Sbjct: 274 PYYP 277
>03_02_0362 - 7809752-7810357,7811018-7811914
Length = 500
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2
Query: 293 PRNDFNEVKNDYNTKNDGNQND 358
P+NDF +V DY T DG Q D
Sbjct: 269 PKNDFLDVLLDYRTTEDGRQFD 290
>01_01_0562 +
4126368-4128196,4128517-4128715,4128827-4128886,
4129129-4129233,4129987-4130127,4130223-4130285,
4130925-4131152,4131250-4131333,4132000-4132157,
4132252-4132777,4133641-4133700,4133904-4134026,
4134906-4135181,4135282-4135347,4135500-4135631,
4135977-4136798,4137026-4137306,4137564-4137796,
4138022-4138260,4138367-4138558,4138808-4139080,
4139186-4139332
Length = 2078
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 341 DGNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGN 457
+G+ ND GP ++ + + G PP+K+NF GN
Sbjct: 427 EGSPND--GPTEYSETTSMDYGELPPEKSNFASTMLIGN 463
>10_07_0175 - 13817381-13817782,13817878-13818131,13818308-13818335
Length = 227
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +2
Query: 302 DFNEVKNDYN---TKND---GNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQ 463
+FN ++ Y+ T++D G++N G P P +N+++ P ++NN G S
Sbjct: 125 EFNVLQTPYDHPMTEDDDFIGDKN--GSPGDVDPSSNYDSDCLPDQENN-TGSSSSSRRA 181
Query: 464 YGNKNDFG 487
G K+D G
Sbjct: 182 KGRKSDKG 189
>10_07_0167 + 13756200-13756227,13756401-13756561,13756754-13757317
Length = 250
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +2
Query: 302 DFNEVKNDYN---TKND---GNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQ 463
+FN ++ Y+ T++D G++N G P P +N+++ P ++NN G S
Sbjct: 94 EFNVLQTPYDHPMTEDDDFIGDKN--GSPGDVDPSSNYDSDCLPDQENN-TGSSSSSRRA 150
Query: 464 YGNKNDFG 487
G K+D G
Sbjct: 151 KGRKSDKG 158
>01_06_0747 -
31645136-31646521,31647870-31648142,31649080-31649148,
31649486-31649614
Length = 618
Score = 28.3 bits (60), Expect = 6.2
Identities = 32/152 (21%), Positives = 55/152 (36%), Gaps = 1/152 (0%)
Frame = +2
Query: 71 REIPTRP*SPSKLINRLSTIKMQYNGFHNQHPIFRPQPDRNEQFGKIPYIKGLPDFGGPK 250
++ P P P + +L MQ QHP P +N+ + P P + +
Sbjct: 392 QQFPPPPVQPQQSNTQLPPQAMQ----PQQHP-----PVQNQMRPQTP--PNYPHYQPHQ 440
Query: 251 NFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFNNGNQPPKKNN 430
+ P P + + + +N V ++++ + +GGP P++N PP
Sbjct: 441 SLNPPPETLPGSMAMQGPYNTVAPAAGSRSEVPYS-YGGPGMPPPQHNMQRQQLPPPSQG 499
Query: 431 FNGDKSPGNMQYGNKNDFGGP-KQQNYNKNYG 523
G S G Y + YN YG
Sbjct: 500 SFGPPSKGG--YAGPPQYAPQGSSHGYNTAYG 529
>01_01_0740 - 5756491-5757054,5757247-5757407,5757580-5757607
Length = 250
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Frame = +2
Query: 302 DFNEVKNDYN---TKND---GNQNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQ 463
+FN ++ Y+ T++D G++N G P P +N+++ P ++NN G S
Sbjct: 94 EFNVLQTPYDHPMTEDDDFIGDKN--GSPGDVDPSSNYDSDCLPDQENN-TGSSSSSRRA 150
Query: 464 YGNKNDFG 487
G K+D G
Sbjct: 151 KGRKSDKG 158
>10_05_0011 -
7822847-7822880,7823653-7823754,7823859-7824106,
7824195-7824240,7824368-7825984,7826673-7826797,
7826915-7829083
Length = 1446
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 470 NKNDFGGPKQQNYNKNYGPKTYNNQNCYGNEQPEFIPRQSYSPNSVQHSLND 625
N G +Q +YN N+ ++ NNQ+ + + +YS N+ Q S D
Sbjct: 495 NAQGLGVLQQSSYNHNFNGESSNNQSNWNGRNSNCV--NTYSINNFQQSNPD 544
>06_03_0551 -
22027441-22028224,22029015-22029344,22029510-22029778,
22030530-22031453,22037761-22038360,22040049-22040267
Length = 1041
Score = 27.9 bits (59), Expect = 8.3
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 350 QNDFGGPKQFRPRNNFNNGNQPPKKNNFNGDKSPGNMQYGNKNDFGGPKQQNYNKNYGPK 529
QND K+ +NN N+ + +NN G+ + NK+ F G QN K++ +
Sbjct: 399 QNDGNSFKEQSVQNNGNSIEEQICENN--GNSCEVQIFQNNKDYFQGQASQNTEKSFIEQ 456
Query: 530 TY-NNQNCY 553
+ NN N +
Sbjct: 457 AFQNNGNSF 465
>02_03_0218 +
16526082-16526375,16526606-16526725,16528078-16528238,
16528601-16528634,16529296-16529398,16529784-16529963,
16530726-16530742
Length = 302
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +2
Query: 245 PKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFG--GPKQFRPRNNFNNGNQPP 418
P N + FR R+D N + K N +DFG + FR +F N + P
Sbjct: 241 PMNMENNFGQHDSRFRNRHDSNYAPRNMENKFGSNDSDFGTQSGRSFRHDPSFRNQHGSP 300
>01_05_0335 +
21074117-21074241,21074299-21074929,21075359-21075399,
21078458-21078560,21078755-21079601,21079938-21080689,
21080712-21080970,21081011-21081354
Length = 1033
Score = 27.9 bits (59), Expect = 8.3
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 2/122 (1%)
Frame = +2
Query: 239 GGPKNFGPRPNMMNKNFRPRNDFNEVKNDYNTKNDGNQNDFGGPKQFRPRNNFN-NGNQP 415
GG +F R N + F + + G +N FGG +Q + +N NG QP
Sbjct: 369 GGQGSFAARANFHPGH--GEGGFQGARGRFGRNRFGARN-FGGGRQGQGGRGWNGNGGQP 425
Query: 416 PKKNNFNGDKSPGNMQYGN-KNDFGGPKQQNYNKNYGPKTYNNQNCYGNEQPEFIPRQSY 592
++ GD G ++ N + FG + + N G + + QP +P +
Sbjct: 426 NAGSHGGGDGWFGQEKFRNTEGGFGLQARPIFGHNPGLRFGQSPTFSFGLQPVPLPFGQF 485
Query: 593 SP 598
P
Sbjct: 486 PP 487
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,572,895
Number of Sequences: 37544
Number of extensions: 395347
Number of successful extensions: 1002
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1000
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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