Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1783
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    24   1.0  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        24   1.0  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   3.1  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   5.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   5.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   5.5  

>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 203 IKFKHLMYMCVRTLDLKQKNIELIFQCH-VMFLNEW 307
           ++FK ++++C+ TL L QK+       + ++ L EW
Sbjct: 1   MQFKPILFLCLATLALGQKDPHFAADRNSIVHLFEW 36


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +1

Query: 40  EGRAR-NATDALTPSSGRYMDTYCDNADM 123
           EGR   N TD+LT  +   +D  C  +DM
Sbjct: 523 EGRQEPNMTDSLTRLANSALDNICQASDM 551


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 203 IKFKHLMYMCVRTLDLKQKNIELIFQCH-VMFLNEW 307
           ++FK ++ +C+ TL L QK+       + ++ L EW
Sbjct: 1   MQFKPILVLCLATLALGQKDPHFAADRNSIVHLFEW 36


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 377 FINTQRNGIESARIEIDFKNVLTPIRSET*HDTEIL 270
           +IN +  G  S  +   F+NVL P  S +   T++L
Sbjct: 177 YINCRAVGNASTALAESFQNVLVPTASNS-KSTKVL 211


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 377 FINTQRNGIESARIEIDFKNVLTPIRSET*HDTEIL 270
           +IN +  G  S  +   F+NVL P  S +   T++L
Sbjct: 177 YINCRAVGNASTALAESFQNVLVPTASNS-KSTKVL 211


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -2

Query: 377 FINTQRNGIESARIEIDFKNVLTPIRSET*HDTEIL 270
           +IN +  G  S  +   F+NVL P  S +   T++L
Sbjct: 177 YINCRAVGNASTALAESFQNVLVPTASNS-KSTKVL 211


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,153
Number of Sequences: 336
Number of extensions: 3540
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)