Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1783
(693 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK127092-1|BAC86823.1| 153|Homo sapiens protein ( Homo sapiens ... 31 3.0
X67334-1|CAA47749.1| 892|Homo sapiens polypeptide BM28 protein. 30 9.0
D83987-1|BAA12177.1| 895|Homo sapiens huMCM2 protein. 30 9.0
D21063-1|BAA04642.1| 914|Homo sapiens KIAA0030 protein. 30 9.0
BT009734-1|AAP88736.1| 895|Homo sapiens MCM2 minichromosome mai... 30 9.0
BC017490-1|AAH17490.2| 904|Homo sapiens minichromosome maintena... 30 9.0
BC017258-1|AAH17258.2| 904|Homo sapiens minichromosome maintena... 30 9.0
BC014272-1|AAH14272.2| 904|Homo sapiens minichromosome maintena... 30 9.0
BC007938-1|AAH07938.2| 904|Homo sapiens minichromosome maintena... 30 9.0
BC007670-1|AAH07670.2| 904|Homo sapiens minichromosome maintena... 30 9.0
BC006165-1|AAH06165.3| 904|Homo sapiens minichromosome maintena... 30 9.0
AY675259-1|AAT70723.1| 904|Homo sapiens MCM2 minichromosome mai... 30 9.0
>AK127092-1|BAC86823.1| 153|Homo sapiens protein ( Homo sapiens
cDNA FLJ45149 fis, clone BRAWH3042132. ).
Length = 153
Score = 31.5 bits (68), Expect = 3.0
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 540 HYKKAPMRNYNNNNFLVSFVPFTPVLYIFIYLYCILHL 427
+YK P R + N + L F+ YI IY+Y +H+
Sbjct: 101 NYKNFPHRGFQNRSSLTRFLHACVYTYINIYIYIYIHI 138
>X67334-1|CAA47749.1| 892|Homo sapiens polypeptide BM28 protein.
Length = 892
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 4 QRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 120
QRR P + GR+ TDALT S GR + + D ++
Sbjct: 7 QRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 45
>D83987-1|BAA12177.1| 895|Homo sapiens huMCM2 protein.
Length = 895
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 4 QRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 120
QRR P + GR+ TDALT S GR + + D ++
Sbjct: 7 QRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 45
>D21063-1|BAA04642.1| 914|Homo sapiens KIAA0030 protein.
Length = 914
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 4 QRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 120
QRR P + GR+ TDALT S GR + + D ++
Sbjct: 26 QRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 64
>BT009734-1|AAP88736.1| 895|Homo sapiens MCM2 minichromosome
maintenance deficient 2, mitotin (S. cerevisiae)
protein.
Length = 895
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 4 QRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 120
QRR P + GR+ TDALT S GR + + D ++
Sbjct: 7 QRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 45
>BC017490-1|AAH17490.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 4 QRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 120
QRR P + GR+ TDALT S GR + + D ++
Sbjct: 16 QRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC017258-1|AAH17258.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 4 QRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 120
QRR P + GR+ TDALT S GR + + D ++
Sbjct: 16 QRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC014272-1|AAH14272.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 4 QRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 120
QRR P + GR+ TDALT S GR + + D ++
Sbjct: 16 QRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC007938-1|AAH07938.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 4 QRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 120
QRR P + GR+ TDALT S GR + + D ++
Sbjct: 16 QRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC007670-1|AAH07670.2| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 4 QRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 120
QRR P + GR+ TDALT S GR + + D ++
Sbjct: 16 QRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>BC006165-1|AAH06165.3| 904|Homo sapiens minichromosome maintenance
complex component 2 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 4 QRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 120
QRR P + GR+ TDALT S GR + + D ++
Sbjct: 16 QRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
>AY675259-1|AAT70723.1| 904|Homo sapiens MCM2 minichromosome
maintenance deficient 2, mitotin (S. cerevisiae)
protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1
Query: 4 QRRFDQ*PQATGEGRARNATDALTPSSGRYMDTYCDNAD 120
QRR P + GR+ TDALT S GR + + D ++
Sbjct: 16 QRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESE 54
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,413,772
Number of Sequences: 237096
Number of extensions: 1674981
Number of successful extensions: 1974
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1974
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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