Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1783
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF288223-1|AAG01337.2|  751|Drosophila melanogaster Crossveinles...    35   0.12 
AE013599-3194|AAF46719.2|  751|Drosophila melanogaster CG15671-P...    33   0.37 
BT021209-1|AAX33357.1|  766|Drosophila melanogaster SD09342p pro...    31   1.5  
AE014296-2499|ABI31254.1| 1063|Drosophila melanogaster CG7255-PH...    31   1.5  
AE014296-2498|ABC66142.1| 1063|Drosophila melanogaster CG7255-PF...    31   1.5  
AE014296-2497|ABI31255.1|  607|Drosophila melanogaster CG7255-PG...    31   1.5  

>AF288223-1|AAG01337.2|  751|Drosophila melanogaster Crossveinless 2
           protein.
          Length = 751

 Score = 34.7 bits (76), Expect = 0.12
 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +3

Query: 330 NFNSSTFDAISLGINKSHKKKKNYHFLN-WRLFINEVCNINK*KYKAQV*TEQKRQENYY 506
           NFN S+ D ++    +SH   + +HF N W++   + C+  K ++ A   T  KR+ N+Y
Sbjct: 522 NFNGSSRDDLTGKDGRSHGDDEVWHFANSWKVGGPKSCS-RKREFLAATPTRDKRKSNFY 580

Query: 507 YYNFSL 524
            +  S+
Sbjct: 581 CHPLSV 586


>AE013599-3194|AAF46719.2|  751|Drosophila melanogaster CG15671-PA
           protein.
          Length = 751

 Score = 33.1 bits (72), Expect = 0.37
 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = +3

Query: 330 NFNSSTFDAISLGINKSHKKKKNYHFLN-WRLFINEVCNINK*KYKAQV*TEQKRQENYY 506
           NFN S+ D ++    +SH   + +HF N W++   + C+  K ++ A   T  KR+ N+Y
Sbjct: 522 NFNGSSRDDLTGKDGRSHGDDEVWHFANSWKVGGPKSCS-RKREFLAATPTCDKRKSNFY 580

Query: 507 YYNFSL 524
            +  S+
Sbjct: 581 CHPLSV 586


>BT021209-1|AAX33357.1|  766|Drosophila melanogaster SD09342p
           protein.
          Length = 766

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 570 VAIIFIYILCHYKKAPMRNYNNNNFLVSFVPFTPVLYIFIYLYCILHL 427
           + ++ + ++C     P R      F V FVP  P + IFI +Y +L L
Sbjct: 217 LVVLMLLVICLICLQP-REARRRLFRVPFVPIVPAISIFINIYLMLQL 263


>AE014296-2499|ABI31254.1| 1063|Drosophila melanogaster CG7255-PH,
           isoform H protein.
          Length = 1063

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 570 VAIIFIYILCHYKKAPMRNYNNNNFLVSFVPFTPVLYIFIYLYCILHL 427
           + ++ + ++C     P R      F V FVP  P + IFI +Y +L L
Sbjct: 514 LVVLMLLVICLICLQP-REARRRLFRVPFVPIVPAISIFINIYLMLQL 560


>AE014296-2498|ABC66142.1| 1063|Drosophila melanogaster CG7255-PF,
           isoform F protein.
          Length = 1063

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 570 VAIIFIYILCHYKKAPMRNYNNNNFLVSFVPFTPVLYIFIYLYCILHL 427
           + ++ + ++C     P R      F V FVP  P + IFI +Y +L L
Sbjct: 514 LVVLMLLVICLICLQP-REARRRLFRVPFVPIVPAISIFINIYLMLQL 560


>AE014296-2497|ABI31255.1|  607|Drosophila melanogaster CG7255-PG,
           isoform G protein.
          Length = 607

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 570 VAIIFIYILCHYKKAPMRNYNNNNFLVSFVPFTPVLYIFIYLYCILHL 427
           + ++ + ++C     P R      F V FVP  P + IFI +Y +L L
Sbjct: 514 LVVLMLLVICLICLQP-REARRRLFRVPFVPIVPAISIFINIYLMLQL 560


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,948,486
Number of Sequences: 53049
Number of extensions: 515029
Number of successful extensions: 1038
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)