Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1783
         (693 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    24   1.6  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    24   1.6  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    24   1.6  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    24   1.6  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    24   1.6  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.4  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   8.4  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 540 HYKKAPMRNYNNNNF 496
           +YK +   NYNNNN+
Sbjct: 88  NYKYSNYNNYNNNNY 102



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 552 YILCHYKKAPMRNYNNNNF 496
           Y   +Y      NYNNNN+
Sbjct: 89  YKYSNYNNYNNNNYNNNNY 107


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 540 HYKKAPMRNYNNNNF 496
           +YK +   NYNNNN+
Sbjct: 88  NYKYSNYNNYNNNNY 102



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 552 YILCHYKKAPMRNYNNNNF 496
           Y   +Y      NYNNNN+
Sbjct: 89  YKYSNYNNYNNNNYNNNNY 107


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 540 HYKKAPMRNYNNNNF 496
           +YK +   NYNNNN+
Sbjct: 88  NYKYSNYNNYNNNNY 102



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 552 YILCHYKKAPMRNYNNNNF 496
           Y   +Y      NYNNNN+
Sbjct: 89  YKYSNYNNYNNNNYNNNNY 107


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 540 HYKKAPMRNYNNNNF 496
           +YK +   NYNNNN+
Sbjct: 88  NYKYSNYNNYNNNNY 102



 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -1

Query: 552 YILCHYKKAPMRNYNNNNF 496
           Y   +Y      NYNNNN+
Sbjct: 89  YKYSNYNNYNNNNYNNNNY 107


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 516 NYNNNNFLVSFVPFTPVLYIFIYL 445
           NYNNNN+  ++  +   LY   Y+
Sbjct: 323 NYNNNNYKYNYNNYNKKLYYKNYI 346


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 620 YCFSQKHPTALSSVT 576
           YC++QKH  ++ +VT
Sbjct: 216 YCYAQKHVKSIRAVT 230


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -3

Query: 136 FFLNSYQHYHNMYP 95
           ++ N Y  YH  YP
Sbjct: 717 YYANLYTKYHGQYP 730


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 552 YILCHYKKAP 523
           Y+ CHYK+ P
Sbjct: 128 YVQCHYKQNP 137


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,754
Number of Sequences: 438
Number of extensions: 4352
Number of successful extensions: 46
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)