Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1782
         (722 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    24   5.5  
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    24   5.5  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -3

Query: 501 KKIIAHFTRQ*CSFQKVKYFFKSVQYFRSLFNTNKQTNLSS 379
           KK++  FTR+     K    FK+ Q  ++L N  + T ++S
Sbjct: 19  KKVVDPFTRKDWYDVKAPNMFKNRQSGKTLVNRTQGTKIAS 59


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 284 LVASKSLVLLLFSATNLKEFQQLSVQYDNDQI 189
           L A K LV  + SA +   FQQ +V+   DQ+
Sbjct: 392 LAAEKLLVFRMNSADDYSVFQQGTVRIRTDQL 423


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,889
Number of Sequences: 2352
Number of extensions: 13974
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)