Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1782
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032744-1|AAH32744.1|  329|Homo sapiens ACTR8 protein protein.        31   5.5  
AK026232-1|BAB15402.1|  374|Homo sapiens protein ( Homo sapiens ...    31   5.5  
AK022996-1|BAB14352.1|  624|Homo sapiens protein ( Homo sapiens ...    31   5.5  

>BC032744-1|AAH32744.1|  329|Homo sapiens ACTR8 protein protein.
          Length = 329

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
 Frame = +1

Query: 238 LVALNSKRT--KLFEATSLGNKQHIL*IIKQCLV*NTKYYLYFSILIL*RG----KICLF 399
           L AL S++T   LFE  +LG  + IL  I  C   +TK  +Y SIL++  G    K   F
Sbjct: 196 LTALMSRKTAISLFEGKALGLDKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEF 255

Query: 400 VCIE*APKVLNRFKKIFHFLEATLLPSEMGYNLFKKN*GSLL 525
           +      K+   F++I   ++    P +M   L     G++L
Sbjct: 256 LQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVL 297


>AK026232-1|BAB15402.1|  374|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22579 fis, clone HSI02562. ).
          Length = 374

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
 Frame = +1

Query: 238 LVALNSKRT--KLFEATSLGNKQHIL*IIKQCLV*NTKYYLYFSILIL*RG----KICLF 399
           L AL S++T   LFE  +LG  + IL  I  C   +TK  +Y SIL++  G    K   F
Sbjct: 241 LTALMSRKTAISLFEGKALGLDKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEF 300

Query: 400 VCIE*APKVLNRFKKIFHFLEATLLPSEMGYNLFKKN*GSLL 525
           +      K+   F++I   ++    P +M   L     G++L
Sbjct: 301 LQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVL 342


>AK022996-1|BAB14352.1|  624|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12934 fis, clone NT2RP2004978, weakly similar to
           ACTIN-LIKE PROTEIN ARP8. ).
          Length = 624

 Score = 30.7 bits (66), Expect = 5.5
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
 Frame = +1

Query: 238 LVALNSKRT--KLFEATSLGNKQHIL*IIKQCLV*NTKYYLYFSILIL*RG----KICLF 399
           L AL S++T   LFE  +LG  + IL  I  C   +TK  +Y SIL++  G    K   F
Sbjct: 491 LTALMSRKTAISLFEGKALGLDKAILHSIDCCSSDDTKKKMYSSILVVGGGLMFHKAQEF 550

Query: 400 VCIE*APKVLNRFKKIFHFLEATLLPSEMGYNLFKKN*GSLL 525
           +      K+   F++I   ++    P +M   L     G++L
Sbjct: 551 LQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVL 592


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,254,949
Number of Sequences: 237096
Number of extensions: 1747623
Number of successful extensions: 7139
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7139
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)