Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1780
         (730 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9GQ90 Cluster: Chitin synthase; n=5; Onchocercidae|Rep...    35   2.3  
UniRef50_Q8IIH3 Cluster: Putative uncharacterized protein; n=4; ...    34   4.1  

>UniRef50_Q9GQ90 Cluster: Chitin synthase; n=5; Onchocercidae|Rep:
           Chitin synthase - Dirofilaria immitis (Canine heartworm)
          Length = 1356

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 295 FTIYKYVRLRKCLKLLKYTH*IMFCCRLNSLAFIFLH 405
           + IYKY + RKC  LL +   +M CCR   +A +F H
Sbjct: 122 YRIYKYPKERKCATLLLF---VMECCRSIGIATLFFH 155


>UniRef50_Q8IIH3 Cluster: Putative uncharacterized protein; n=4;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 2147

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
 Frame = +2

Query: 83   NEIGYYNIKQ-NKNITNIDPLCFPRIYM*YFDSAAHILTSDTGYITEISITYI*RLLKNR 259
            N I YY  K  NK ++ I P+   ++Y    +S  HI   +   I E   T+   LLKNR
Sbjct: 1424 NVINYYLYKNDNKGLSYILPILLKKLYK--LNSYIHIFDDEFFVIKE---TF--NLLKNR 1476

Query: 260  FSII--SNNVN 286
            F II  SNN+N
Sbjct: 1477 FHIIGESNNIN 1487


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,451,238
Number of Sequences: 1657284
Number of extensions: 11556102
Number of successful extensions: 20722
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20721
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)