Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1779
(721 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 126 1e-29
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 126 1e-29
Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical pr... 122 3e-28
AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA ... 122 3e-28
Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical pr... 117 7e-27
AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA... 117 7e-27
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.5
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 29 2.5
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical... 29 4.4
U41993-2|AAO12432.1| 118|Caenorhabditis elegans Hypothetical pr... 28 7.7
U41993-1|AAO12433.1| 390|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF038615-4|AAB94143.1| 743|Caenorhabditis elegans Hypothetical ... 28 7.7
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 126 bits (305), Expect = 1e-29
Identities = 58/132 (43%), Positives = 81/132 (61%), Gaps = 3/132 (2%)
Frame = -1
Query: 685 MLLYCHCT---FPVYFWNENPWSSWYVASMFRYTISLHFTWLVNSAAHLWGNKPYDQYIG 515
++L+C PVYFW E + ++YVA FRY +LH TW +NSAAH +G KPYD +
Sbjct: 198 VILFCFILPTIIPVYFWKETAFIAFYVAGTFRYCFTLHATWCINSAAHYFGWKPYDTSVS 257
Query: 514 ATDNKTVAICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVS 335
A +N + A+GEG HN+HH FP DY+A+E N + LID AA GL YD KT++
Sbjct: 258 AVENVFTTVVAVGEGGHNFHHTFPQDYRASEY-SLIYNWTRVLIDTAAVLGLVYDRKTIA 316
Query: 334 EKMIRNRINRTG 299
++ I ++ G
Sbjct: 317 DEFISRQVANHG 328
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 126 bits (305), Expect = 1e-29
Identities = 58/132 (43%), Positives = 81/132 (61%), Gaps = 3/132 (2%)
Frame = -1
Query: 685 MLLYCHCT---FPVYFWNENPWSSWYVASMFRYTISLHFTWLVNSAAHLWGNKPYDQYIG 515
++L+C PVYFW E + ++YVA FRY +LH TW +NSAAH +G KPYD +
Sbjct: 198 VILFCFILPTIIPVYFWKETAFIAFYVAGTFRYCFTLHATWCINSAAHYFGWKPYDTSVS 257
Query: 514 ATDNKTVAICALGEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVS 335
A +N + A+GEG HN+HH FP DY+A+E N + LID AA GL YD KT++
Sbjct: 258 AVENVFTTVVAVGEGGHNFHHTFPQDYRASEY-SLIYNWTRVLIDTAAVLGLVYDRKTIA 316
Query: 334 EKMIRNRINRTG 299
++ I ++ G
Sbjct: 317 DEFISRQVANHG 328
>Z95123-2|CAB08356.1| 339|Caenorhabditis elegans Hypothetical
protein VZK822L.1 protein.
Length = 339
Score = 122 bits (294), Expect = 3e-28
Identities = 55/120 (45%), Positives = 73/120 (60%)
Frame = -1
Query: 658 PVYFWNENPWSSWYVASMFRYTISLHFTWLVNSAAHLWGNKPYDQYIGATDNKTVAICAL 479
PVYFW E + ++Y A FRY +LH TW +NSAAH +G KPYD I +N I A+
Sbjct: 211 PVYFWKETAFIAFYTAGTFRYCFTLHATWCINSAAHYFGWKPYDSSITPVENVFTTIAAV 270
Query: 478 GEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIRNRINRTG 299
GEG HN+HH FP DY+ +E N + LID AA GL YD KT +++I +++ G
Sbjct: 271 GEGGHNFHHTFPQDYRTSEY-SLKYNWTRVLIDTAAALGLVYDRKTACDEIIGRQVSNHG 329
>AF260244-1|AAF97550.1| 339|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-6 protein.
Length = 339
Score = 122 bits (294), Expect = 3e-28
Identities = 55/120 (45%), Positives = 73/120 (60%)
Frame = -1
Query: 658 PVYFWNENPWSSWYVASMFRYTISLHFTWLVNSAAHLWGNKPYDQYIGATDNKTVAICAL 479
PVYFW E + ++Y A FRY +LH TW +NSAAH +G KPYD I +N I A+
Sbjct: 211 PVYFWKETAFIAFYTAGTFRYCFTLHATWCINSAAHYFGWKPYDSSITPVENVFTTIAAV 270
Query: 478 GEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIRNRINRTG 299
GEG HN+HH FP DY+ +E N + LID AA GL YD KT +++I +++ G
Sbjct: 271 GEGGHNFHHTFPQDYRTSEY-SLKYNWTRVLIDTAAALGLVYDRKTACDEIIGRQVSNHG 329
>Z82073-6|CAB04924.1| 333|Caenorhabditis elegans Hypothetical
protein W06D12.3 protein.
Length = 333
Score = 117 bits (282), Expect = 7e-27
Identities = 50/120 (41%), Positives = 74/120 (61%)
Frame = -1
Query: 658 PVYFWNENPWSSWYVASMFRYTISLHFTWLVNSAAHLWGNKPYDQYIGATDNKTVAICAL 479
PV W E+ + ++Y A++FRY +LH TW +NS +H G +PYD + DN +I A+
Sbjct: 202 PVVLWGESAFIAFYTAALFRYCFTLHATWCINSVSHWVGWQPYDHQASSVDNLWTSIAAV 261
Query: 478 GEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIRNRINRTG 299
GEG HNYHH FP DY+ +E ++ N + LID A G+ YD KT E++I+ + + G
Sbjct: 262 GEGGHNYHHTFPQDYRTSEHAEF-LNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320
>AF260242-1|AAF97548.1| 333|Caenorhabditis elegans palmitoyl-CoA
fatty acid desaturaseFAT-5 protein.
Length = 333
Score = 117 bits (282), Expect = 7e-27
Identities = 50/120 (41%), Positives = 74/120 (61%)
Frame = -1
Query: 658 PVYFWNENPWSSWYVASMFRYTISLHFTWLVNSAAHLWGNKPYDQYIGATDNKTVAICAL 479
PV W E+ + ++Y A++FRY +LH TW +NS +H G +PYD + DN +I A+
Sbjct: 202 PVVLWGESAFIAFYTAALFRYCFTLHATWCINSVSHWVGWQPYDHQASSVDNLWTSIAAV 261
Query: 478 GEGWHNYHHVFPWDYKAAELGDYSTNLSTALIDIAAKYGLAYDLKTVSEKMIRNRINRTG 299
GEG HNYHH FP DY+ +E ++ N + LID A G+ YD KT E++I+ + + G
Sbjct: 262 GEGGHNYHHTFPQDYRTSEHAEF-LNWTRVLIDFGASIGMVYDRKTTPEEVIQRQCKKFG 320
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/68 (35%), Positives = 35/68 (51%)
Frame = -2
Query: 564 TPPHTSGGTSHMINT*EQLITKLWRSVL*ARVGTTIITYFPGTTKRPSSETTAPIYQPP* 385
TP HT T+ T + ++T SV GTT + P TT P+++TTAP+ +P
Sbjct: 550 TPTHT---TASQPTTTKPVVTT--NSVT-PSTGTTTVPV-PTTTGSPTTQTTAPVTKPTV 602
Query: 384 LTSLQNTA 361
+S TA
Sbjct: 603 PSSTTQTA 610
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/86 (23%), Positives = 33/86 (38%)
Frame = -1
Query: 604 FRYTISLHFTWLVNSAAHLWGNKPYDQYIGATDNKTVAICALGEGWHNYHHVFPWDYKAA 425
F Y +S+ F W + + +PY+ TDN + W FP+
Sbjct: 221 FPYLLSMLFVWFICFIMTITDLEPYNG-AARTDNNVTMMVLRESPWFQVPLPFPFGIPKI 279
Query: 424 ELGDYSTNLSTALIDIAAKYGLAYDL 347
G + +++ L I G +YDL
Sbjct: 280 SAGIFFGYIASVLASIIENIG-SYDL 304
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = -2
Query: 468 GTTIITYFPGTTKRPSSETTAPIYQPP*LTSLQNTA 361
GTT + P TT P+++TTAP+ +P +S TA
Sbjct: 520 GTTTVPV-PTTTGSPTTQTTAPVTKPTVPSSTTQTA 554
>AC024796-11|AAK29890.2| 828|Caenorhabditis elegans Hypothetical
protein Y48G1C.8 protein.
Length = 828
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -1
Query: 340 VSEKMIRNRINRTGDGTHPWAKQKA 266
V + N+IN TGDG PW A
Sbjct: 444 VPANFVANQINHTGDGLSPWTVNPA 468
>U41993-2|AAO12432.1| 118|Caenorhabditis elegans Hypothetical
protein F44A2.5a protein.
Length = 118
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 444 PGTTKRPSSETTAPIYQPP*LTS 376
P TTK+P++ IY+PP L S
Sbjct: 17 PATTKKPTNRPAMQIYRPPGLRS 39
>U41993-1|AAO12433.1| 390|Caenorhabditis elegans Hypothetical
protein F44A2.5b protein.
Length = 390
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 444 PGTTKRPSSETTAPIYQPP*LTS 376
P TTK+P++ IY+PP L S
Sbjct: 17 PATTKKPTNRPAMQIYRPPGLRS 39
>AF038615-4|AAB94143.1| 743|Caenorhabditis elegans Hypothetical
protein R02D3.2 protein.
Length = 743
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -1
Query: 286 PWAKQKAELEEDHHHLENPIWGWGDKDMSDDDKKLAEIVHKK 161
P ++ EL +D E WGWGD D + + E+ K
Sbjct: 695 PISEYLTELTQDDPIEEEEGWGWGDDDGEEQEISSKEVESPK 736
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,195,484
Number of Sequences: 27780
Number of extensions: 382958
Number of successful extensions: 1001
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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