Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1779
         (721 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     23   2.2  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   6.7  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 717 KKTYLFVMPILCFFIA 670
           KKT  FV+PI+  F+A
Sbjct: 224 KKTVCFVIPIMLLFLA 239


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 91  NSFNINLHKMCTSETLELLISSHSFCEQFP 180
           ++   +L +  +SE  +L +   SFC+ FP
Sbjct: 267 DNLETSLFRPLSSEATDLRMGVASFCKAFP 296


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/31 (32%), Positives = 10/31 (32%)
 Frame = -2

Query: 645 GTKIHGPRGMSHQCLDTRSVFTSRGWLTPPH 553
           G   H      H  L TR      GW   PH
Sbjct: 239 GVVFHHDNARPHTSLVTRQKLLELGWDVLPH 269


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,995
Number of Sequences: 438
Number of extensions: 4656
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)