Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1777
(471 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 66 1e-11
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 58 5e-09
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 50 7e-07
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 47 9e-06
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 45 4e-05
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 42 3e-04
05_05_0075 + 22209322-22210041,22210323-22210391,22210775-222111... 30 1.1
08_01_0690 - 6106689-6106988,6107278-6107391,6107528-6107596,610... 29 2.5
03_04_0049 - 16814121-16814515,16815659-16815788,16815905-168159... 29 2.5
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 28 4.4
01_05_0613 - 23659388-23659813,23659924-23660308,23660482-23660555 28 4.4
01_05_0357 - 21344146-21344575,21344629-21345455,21345782-21345784 28 4.4
10_02_0045 - 4518721-4518987,4519016-4519060 27 5.8
03_02_0263 - 6948618-6948818,6948909-6948971,6949078-6949146,694... 27 5.8
10_08_0076 + 14685364-14686468,14686521-14686540,14686614-146867... 27 7.6
03_02_0146 + 5916692-5917931,5918198-5918261,5918836-5919057,591... 27 7.6
01_06_1200 - 35362412-35362432,35362526-35362715,35362799-353628... 27 7.6
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 66.5 bits (155), Expect = 1e-11
Identities = 40/112 (35%), Positives = 58/112 (51%)
Frame = +3
Query: 114 VYPPEPFNPVADAKTLHKAMKGFGTDEKAIIDGALPPRHLCNASRSHETFKTNYGKDLIS 293
V PP +P DA L KA +G+GTDE+A+I G L R + T++ NY ++LI
Sbjct: 5 VVPPVTPSPAEDADALLKAFQGWGTDEQAVI-GVLAHRDATQRKQIRLTYEENYNENLIQ 63
Query: 294 ELNSELTGNLENVILALMTPLPHFYTKELHDAVSGIGTDEEAIIEILCTLSN 449
L SEL+G+LE + + ++ A I D I+EI CT S+
Sbjct: 64 RLQSELSGDLERAMYHWVLDPVERQAVMVNTATKCIHEDYAVIVEIACTNSS 115
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 321 LENVILALMTPLPHFYTKELHDAVSGIGTDEEAIIEIL 434
+ +++ +TP P L A G GTDE+A+I +L
Sbjct: 1 MATIVVPPVTPSPAEDADALLKAFQGWGTDEQAVIGVL 38
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 57.6 bits (133), Expect = 5e-09
Identities = 34/107 (31%), Positives = 52/107 (48%)
Frame = +3
Query: 120 PPEPFNPVADAKTLHKAMKGFGTDEKAIIDGALPPRHLCNASRSHETFKTNYGKDLISEL 299
PP P +P DA LH+A KGFG D A + L R + + Y +DL+ L
Sbjct: 7 PPVPTDPRRDAIDLHRAFKGFGCDATA-VTAILAHRDASQRALIRRHYAAVYHQDLLHRL 65
Query: 300 NSELTGNLENVILALMTPLPHFYTKELHDAVSGIGTDEEAIIEILCT 440
+EL+G+ + +L + LH A++G TD A E++C+
Sbjct: 66 AAELSGHHKRAVLLWVLDPASRDAAVLHQALNGDVTDMRAATEVVCS 112
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 150 AKTLHKAMKGFGTDEKAIIDGALPPRHLCNASRSHETFKTNYGKDLISELNSELTGNLEN 329
AK LH+AMKG GT++ +I + R + + +Y + L ++SE +GN
Sbjct: 278 AKVLHEAMKGLGTNDTTLI-RVVTTRAEVDMQYIKAEYHRSYKRSLADAVHSETSGNYRT 336
Query: 330 VILALM 347
+L+L+
Sbjct: 337 FLLSLI 342
Score = 33.5 bits (73), Expect = 0.088
Identities = 17/66 (25%), Positives = 35/66 (53%)
Frame = +3
Query: 270 NYGKDLISELNSELTGNLENVILALMTPLPHFYTKELHDAVSGIGTDEEAIIEILCTLSN 449
N G+ + SE + L ++ +P +F K LH+A+ G+GT++ +I ++ T +
Sbjct: 246 NGGRAVKSETSGNFGFGLLTILRCAESPAKYF-AKVLHEAMKGLGTNDTTLIRVVTTRAE 304
Query: 450 YGIRTI 467
++ I
Sbjct: 305 VDMQYI 310
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 50.4 bits (115), Expect = 7e-07
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Frame = +3
Query: 111 TVYPPEPFNPVA-DAKTLHKAMKGFGTDEKAIIDGALPPRHLCNASRSHETFKTNYGKDL 287
T+ P PVA D + L KA KG+GT+EK II L R + YG++L
Sbjct: 3 TLTVPAAVPPVAEDCEQLRKAFKGWGTNEKLII-SILAHRDAAQRRAIRRAYAEAYGEEL 61
Query: 288 ISELNSELTGNLENVILALM----------TPLPHFYTKELHDAVSGIGTDEEAIIEILC 437
+ LN E+ G E ++ + T L H K LH+ + ++ II IL
Sbjct: 62 LRALNDEIHGKFELLVPLVTVYRYDGPEVNTSLAHSEAKILHEKIHDKAYSDDEIIRILT 121
Query: 438 TLS 446
T S
Sbjct: 122 TRS 124
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +3
Query: 144 ADAKTLHKAM--KGFGTDEKA-IIDGALPPRHLCNASRSHETFKTNYGKDLISELNSELT 314
++AK LH+ + K + DE I+ + L + ++ F KDL ++ E
Sbjct: 97 SEAKILHEKIHDKAYSDDEIIRILTTRSKAQLLATFNSYNDQFGHPITKDLKADPKDEFL 156
Query: 315 GNLENVILALMTPLPHFYTKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 467
G L +I P ++ K + A+ G+GTDE ++ I+ T + ++ I
Sbjct: 157 GTLRAIIRCFTCP-DRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKLI 206
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 46.8 bits (106), Expect = 9e-06
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +3
Query: 147 DAKTLHKA-MKGFGTDEKAIIDGALPPRHLCNASRSHETFKTNYGKDLISELNSELTGNL 323
DAK L+KA K GTDEK I R + + + Y + L + SE +GN
Sbjct: 158 DAKDLYKAGEKRLGTDEKTFIR-IFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNF 216
Query: 324 ENVILALMTPLPH---FYTKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 467
E +L ++ + ++ K L ++ G+GTD+ +I ++ T + ++ I
Sbjct: 217 ELALLTILRCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYI 267
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +3
Query: 150 AKTLHKAMKGFGTDEKAIIDGALPPRHLCNASRSHETFKTNYGKDLISELNSELTGNLEN 329
AK L K+MKG GTD+ +I + + E +K Y K L ++SE +GN
Sbjct: 235 AKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYK-KYKKSLAEAIHSETSGNYRT 293
Query: 330 VILALM 347
+L+L+
Sbjct: 294 FLLSLV 299
Score = 33.5 bits (73), Expect = 0.088
Identities = 32/107 (29%), Positives = 50/107 (46%)
Frame = +3
Query: 120 PPEPFNPVADAKTLHKAMKGFGTDEKAIIDGALPPRHLCNASRSHETFKTNYGKDLISEL 299
PP P NP DA LHKA KG + ++ G L C ++ T + G +
Sbjct: 7 PPAPTNPRQDAIDLHKAFKG-----RTVVVGVLD----CQMLKTW-TGRAEVGNGAAFKG 56
Query: 300 NSELTGNLENVILALMTPLPHFYTKELHDAVSGIGTDEEAIIEILCT 440
+S G+ + ++L ++ P T L +A+SG D A EI+C+
Sbjct: 57 SS---GDWKAMLLWILDPAGRDAT-VLREALSGDTIDLRAATEIICS 99
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/72 (31%), Positives = 43/72 (59%)
Frame = +3
Query: 123 PEPFNPVADAKTLHKAMKGFGTDEKAIIDGALPPRHLCNASRSHETFKTNYGKDLISELN 302
P P +P DA+++ KA++G+GTDE A+I+ L R + ++ Y + L+ L+
Sbjct: 55 PAP-SPTEDAESIRKAVQGWGTDENALIE-ILGHRTAAQRAEIAVAYEGLYDETLLDRLH 112
Query: 303 SELTGNLENVIL 338
SEL+G+ + ++
Sbjct: 113 SELSGDFRSALM 124
Score = 31.1 bits (67), Expect = 0.47
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Frame = +3
Query: 141 VADAKTLHKAMKGFGT----DEKAIIDGALPPRHLCNASRSHETFKTNYGKDLISELNS- 305
+A+A LH A+ G G D+ I G R + + E ++ +GK + L+
Sbjct: 221 IAEAAELHDAVVGRGQALHGDDVVRIVGT---RSKAQLAVTLERYRQEHGKGIDEVLDGR 277
Query: 306 ---ELTGNLENVILALMTPLPHFYTKELHDAVSGIGTDEEAI 422
+L L+ + L +P HF + + ++ G+GTDEE +
Sbjct: 278 RGDQLAAVLKAALWCLTSPEKHF-AEVIRTSILGLGTDEEML 318
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 351 PLPHFYTKELHDAVSGIGTDEEAIIEIL 434
P P + + AV G GTDE A+IEIL
Sbjct: 57 PSPTEDAESIRKAVQGWGTDENALIEIL 84
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 41.9 bits (94), Expect = 3e-04
Identities = 27/112 (24%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Frame = +3
Query: 144 ADAKTLHKAM--KGFGTDEKA-IIDGALPPRHLCNASRSHETFKTNYGKDLISELNSELT 314
++AK LH+ + K +G DE I+ + + +R ++ + KDL ++ E
Sbjct: 172 SEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKDLKADPKDEFL 231
Query: 315 GNLENVILALMTPLPHFYTKELHDAVSGIGTDEEAIIEILCTLSNYGIRTIS 470
L +I P ++ K + A++G+GTDE ++ I+ T + ++ I+
Sbjct: 232 STLRAIIRCFCCP-DRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKLIT 282
>05_05_0075 +
22209322-22210041,22210323-22210391,22210775-22211145,
22212291-22212351,22212496-22213086
Length = 603
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 83 TILPLQVHPHGVPPGAVQPGRGCQDPSQGY 172
T+ Q+ HG+PPGA G G Q PSQ +
Sbjct: 89 TLAHAQLVAHGMPPGAATSG-GAQIPSQNF 117
>08_01_0690 -
6106689-6106988,6107278-6107391,6107528-6107596,
6107754-6107858,6108412-6108522,6108957-6109199
Length = 313
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -2
Query: 383 VELLSVEVGQGSHQCEDDIFQVAGEFTVEFANQVLAIVSLEGLMRSRGVAQM 228
++ +S+E QGS DD+ +V E TV N V L+G + +A +
Sbjct: 75 LQRVSLEEDQGSSDKSDDLVRVLRELTVVQRNIANLQVELQGRKDDKNIAHL 126
>03_04_0049 -
16814121-16814515,16815659-16815788,16815905-16815963,
16816610-16817102
Length = 358
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 251 RSRGVAQMPRRQSTVDDS-LLIGAEALHSLVKGLGI 147
+ VA M R ST+ DS LLI A HS+ +G+ I
Sbjct: 189 QDHSVASMLRNASTLGDSVLLIAALCFHSVFEGIAI 224
>03_06_0353 - 33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 27.9 bits (59), Expect = 4.4
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -2
Query: 209 VDDSLLIGAEALHSLVKGLGIRDRVERLRGVHRGGALVRVVLLSA 75
+ DSLL+ L L K + I D + R G+H G V + ++S+
Sbjct: 1560 ISDSLLLEHLGLGYLSKDIIISDTLSRALGIHEYGPKVLIDIISS 1604
>01_05_0613 - 23659388-23659813,23659924-23660308,23660482-23660555
Length = 294
Score = 27.9 bits (59), Expect = 4.4
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = -2
Query: 266 LEGLMRSRGVAQMPRRQSTVDDSL--LIGAEALH-----SLVKGLGIRDRVERLRGVHRG 108
L GL+ R A M +ST DD L L+ + H +GL I+D VE + +
Sbjct: 46 LRGLIGKRMQA-MKEGESTKDDLLGILLESNTKHMEENGQSSQGLTIKDIVEECKLFYFA 104
Query: 107 GALVRVVLLSAHVQILLFNSDTPNHPRPE 21
GA VLL+ + +L + + +H R E
Sbjct: 105 GAETTSVLLTWTMLLLSIHPEWQDHAREE 133
>01_05_0357 - 21344146-21344575,21344629-21345455,21345782-21345784
Length = 419
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +3
Query: 333 ILALMTPLPHFYTKELHDAVSGIGTDEEAIIEIL 434
+L + +P F + L++AV+G+ D+E++ +L
Sbjct: 168 LLLMENQIPFFVLERLYEAVAGMQPDKESLFNLL 201
>10_02_0045 - 4518721-4518987,4519016-4519060
Length = 103
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 9 FRNFLRSWVVGCVAVKQKNLNMSGQQYYPYKCTPTVYPP 125
FR W VA+KQ++ G+ +P TV+ P
Sbjct: 63 FREHASRWPAAVVALKQRSSRKGGEGCFPPCAAATVFRP 101
>03_02_0263 -
6948618-6948818,6948909-6948971,6949078-6949146,
6949232-6949297,6949380-6949526,6949608-6949702,
6949845-6950016,6952187-6952318,6953581-6953674,
6954067-6954184,6955884-6957057
Length = 776
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 86 ILPLQVHPHGVPPGAVQPGRGCQDPSQGYEGLRHR*EGYHRRCSAAAAS 232
I+PL ++P+ +PP A C +Q + Y CSAAA+S
Sbjct: 474 IIPLPINPYQLPPSA----GACCSTTQASASAKDGGNMYSPPCSAAASS 518
>10_08_0076 +
14685364-14686468,14686521-14686540,14686614-14686749,
14687537-14687664,14687742-14687855
Length = 500
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 213 ALPPRHLCNASRSHETFKTNYGKDLISELNSELTG 317
ALPP H+ N S N+ L+ NS+LTG
Sbjct: 363 ALPPNHVLNLSHQVYYENQNFNVLLLLIKNSDLTG 397
>03_02_0146 +
5916692-5917931,5918198-5918261,5918836-5919057,
5919626-5919747,5920105-5920170,5920192-5920386,
5920480-5921057,5921818-5921968,5922465-5922715
Length = 962
Score = 27.1 bits (57), Expect = 7.6
Identities = 20/76 (26%), Positives = 28/76 (36%)
Frame = +3
Query: 222 PRHLCNASRSHETFKTNYGKDLISELNSELTGNLENVILALMTPLPHFYTKELHDAVSGI 401
P C A S + T G D + N +GN E + + + F + H V
Sbjct: 210 PSPFCRAVLSQPS-GTPLGTDATAPKNLSRSGNREAYVKSCSSRTRTFSSAHAHSTVVPP 268
Query: 402 GTDEEAIIEILCTLSN 449
GT+ E E C N
Sbjct: 269 GTNAEPSAESFCAPGN 284
>01_06_1200 -
35362412-35362432,35362526-35362715,35362799-35362899,
35362985-35363116,35363204-35363302,35363493-35363568,
35363649-35363941,35364032-35364160,35364332-35364480,
35364562-35364633,35364728-35364776,35365039-35365107,
35365201-35365256,35365357-35365429,35365508-35365584,
35365847-35365934,35366086-35366259,35366358-35366473,
35366681-35366984,35367084-35367146,35367224-35367286,
35367393-35367506,35368672-35368675,35368894-35368952,
35369024-35369098,35369691-35369798,35372331-35372792
Length = 1071
Score = 27.1 bits (57), Expect = 7.6
Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 7/144 (4%)
Frame = +3
Query: 18 FLRSWVVGCVAVKQKNLNMSGQQYY-PYKCTPTVYPPEPFNPVADAK-TLHKA--MKGFG 185
F+ W + + QK+ N+ G YY TV E P+ + ++ K +K +
Sbjct: 430 FVYDWCMNRIKKFQKSKNLGGCLYYWAVSYLDTVDFGERNVPIGFPRMSVWKEGMIKRYS 489
Query: 186 TDEKAIID--GALPPRHLCNASRSHETFKTNYGKDLISELNSELTGN-LENVILALMTPL 356
+K D G PPR +C+ S S + +Y LI +L + + G L N + +++ +
Sbjct: 490 DFDKMDDDTFGLRPPRVICSTSNSQLHLEKHY---LIMQLLNYVIGEALPNYLKDMISAM 546
Query: 357 PHFYTKELHDAVSGIGTDEEAIIE 428
+ E+H++ I + +++
Sbjct: 547 ESVHA-EVHNSTDHIDVGDVHVLD 569
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,555,924
Number of Sequences: 37544
Number of extensions: 316581
Number of successful extensions: 1064
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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