Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1774
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    25   1.6  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   8.4  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   8.4  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.4  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   8.4  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.4  

>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = +3

Query: 228 MVKLVPKNHLMSEQEWRSIGVQQSQGWV-HYMTHQPEP 338
           ++  VP NH   E EW    VQ+  G+  +Y+   P+P
Sbjct: 114 ILDFVP-NHSSDEHEWFKKSVQRVSGYEDYYVWQDPKP 150


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
 Frame = +3

Query: 84  GGSN*GNRSLEIFLSRNLLRDIMSRDIYYSQKYYDEEHEYRHVVLPKEMV---KLVPKNH 254
           GG   G+R  E  LSR+    I+   +  S    D  H + H  L  +M       P   
Sbjct: 466 GGGGGGSR-YEHHLSRHA-SSILPSSLVSSPDGTDLPH-HTHYQLHHQMSYHNMFTPSRE 522

Query: 255 LMSEQEWRSIGVQQSQGWVHYMTHQPE 335
             +    RS G + +  W H+ +H P+
Sbjct: 523 PGTAWRCRSCGKEVTNRWHHFHSHTPQ 549


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
 Frame = +3

Query: 84  GGSN*GNRSLEIFLSRNLLRDIMSRDIYYSQKYYDEEHEYRHVVLPKEMV---KLVPKNH 254
           GG   G+R  E  LSR+    I+   +  S    D  H + H  L  +M       P   
Sbjct: 442 GGGGGGSR-YEHHLSRHA-SSILPSSLVSSPDGTDLPH-HTHYQLHHQMSYHNMFTPSRE 498

Query: 255 LMSEQEWRSIGVQQSQGWVHYMTHQPE 335
             +    RS G + +  W H+ +H P+
Sbjct: 499 PGTAWRCRSCGKEVTNRWHHFHSHTPQ 525


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 566 LDKRYTFDLKKKTLIYTVDTV 504
           LD  +   +++KTL YTV+ +
Sbjct: 231 LDITFNITMRRKTLFYTVNII 251


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 566 LDKRYTFDLKKKTLIYTVDTV 504
           LD  +   +++KTL YTV+ +
Sbjct: 231 LDITFNITMRRKTLFYTVNII 251


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -3

Query: 566 LDKRYTFDLKKKTLIYTVDTV 504
           LD  +   +++KTL YTV+ +
Sbjct: 227 LDITFNITMRRKTLFYTVNLI 247


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,636
Number of Sequences: 2352
Number of extensions: 14235
Number of successful extensions: 50
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)