Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1771
(670 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 183 1e-46
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 181 4e-46
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 181 4e-46
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 181 4e-46
12_02_1282 + 27528159-27529148,27529549-27529614 181 5e-46
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 179 2e-45
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 179 2e-45
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 178 4e-45
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 176 1e-44
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 176 1e-44
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 91 1e-18
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 87 2e-17
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 84 1e-16
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 71 8e-13
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 52 5e-07
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 46 3e-05
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 44 1e-04
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 43 2e-04
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 40 0.002
06_01_0486 - 3455030-3455770 36 0.039
05_03_0342 - 12704683-12704736,12704827-12704895,12704969-12706003 32 0.36
04_03_0904 + 20717005-20718087 32 0.48
03_05_0524 - 25181432-25181483,25181565-25181691,25181776-251818... 30 1.5
12_02_1054 - 25721220-25721582,25723163-25723727,25724162-257244... 30 1.9
04_04_0512 + 25806599-25808080 29 2.5
01_07_0260 - 42364769-42364777,42364884-42365354 29 2.5
11_02_0086 + 8186355-8186667,8186773-8187335 29 3.3
03_05_0402 - 23851755-23851802,23852012-23852022,23853055-23853427 29 3.3
07_03_0366 + 17321948-17322331 29 4.4
03_01_0470 + 3619417-3619572,3619681-3619759,3620017-3620258,362... 29 4.4
12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702 28 5.9
10_08_0029 + 14270945-14271364,14271449-14272486 28 5.9
05_05_0191 + 23127068-23127331,23127514-23127546 28 5.9
04_04_1125 + 31085106-31085714 28 5.9
04_01_0208 + 2596110-2596928 28 5.9
02_04_0179 + 20682852-20684510,20684593-20684661,20684741-206848... 28 5.9
01_01_0586 - 4353919-4353973,4354623-4354940,4355043-4355323 28 5.9
09_02_0227 - 6029995-6030277,6030456-6030502 28 7.7
08_01_1006 - 10191817-10191822,10192449-10192745,10192826-101929... 28 7.7
07_01_0720 + 5512638-5513141,5513588-5514607 28 7.7
06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312 28 7.7
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 28 7.7
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 28 7.7
03_05_0735 - 27247767-27248285,27249030-27249318,27250594-27251093 28 7.7
02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550 28 7.7
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 183 bits (446), Expect = 1e-46
Identities = 88/119 (73%), Positives = 94/119 (78%)
Frame = +2
Query: 314 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 493
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 494 THIMFETFNTPAMYVCHSSRALAVRVRSYHPYLAGLPRRCLPHPCPFYEGYALPHAILR 670
T IMFETFNTPAMYV + L++ + + H P YEGYALPHAILR
Sbjct: 122 TQIMFETFNTPAMYVAIQA-VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
Score = 106 bits (254), Expect = 2e-23
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHEQK 321
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 181 bits (441), Expect = 4e-46
Identities = 87/119 (73%), Positives = 93/119 (78%)
Frame = +2
Query: 314 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 493
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 494 THIMFETFNTPAMYVCHSSRALAVRVRSYHPYLAGLPRRCLPHPCPFYEGYALPHAILR 670
T IMFETFN PAMYV + L++ + + H P YEGYALPHAILR
Sbjct: 122 TQIMFETFNVPAMYVAIQA-VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
Score = 106 bits (254), Expect = 2e-23
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHEQK 321
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 181 bits (441), Expect = 4e-46
Identities = 87/119 (73%), Positives = 93/119 (78%)
Frame = +2
Query: 314 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 493
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 494 THIMFETFNTPAMYVCHSSRALAVRVRSYHPYLAGLPRRCLPHPCPFYEGYALPHAILR 670
T IMFETFN PAMYV + L++ + + H P YEGYALPHAILR
Sbjct: 122 TQIMFETFNVPAMYVAIQA-VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
Score = 106 bits (254), Expect = 2e-23
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHEQK 321
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 181 bits (441), Expect = 4e-46
Identities = 87/119 (73%), Positives = 93/119 (78%)
Frame = +2
Query: 314 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 493
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 494 THIMFETFNTPAMYVCHSSRALAVRVRSYHPYLAGLPRRCLPHPCPFYEGYALPHAILR 670
T IMFETFN PAMYV + L++ + + H P YEGYALPHAILR
Sbjct: 122 TQIMFETFNVPAMYVAIQA-VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
Score = 106 bits (254), Expect = 2e-23
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHEQK 321
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 181 bits (440), Expect = 5e-46
Identities = 87/119 (73%), Positives = 92/119 (77%)
Frame = +2
Query: 314 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 493
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 494 THIMFETFNTPAMYVCHSSRALAVRVRSYHPYLAGLPRRCLPHPCPFYEGYALPHAILR 670
T IMFETFN PAMYV + L++ + + H P YEGYALPHAILR
Sbjct: 122 TQIMFETFNAPAMYVAIQA-VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
Score = 105 bits (251), Expect = 4e-23
Identities = 46/60 (76%), Positives = 53/60 (88%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHEQK 321
+++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA ++
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 179 bits (436), Expect = 2e-45
Identities = 87/119 (73%), Positives = 93/119 (78%)
Frame = +2
Query: 314 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 493
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 494 THIMFETFNTPAMYVCHSSRALAVRVRSYHPYLAGLPRRCLPHPCPFYEGYALPHAILR 670
T IMFETFN PAMYV + L++ +G + H P YEGYALPHAILR
Sbjct: 122 TQIMFETFNAPAMYVAIQA-VLSLYASGRIVLDSG---DGVTHTVPIYEGYALPHAILR 176
Score = 106 bits (254), Expect = 2e-23
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHEQK 321
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 179 bits (435), Expect = 2e-45
Identities = 85/119 (71%), Positives = 93/119 (78%)
Frame = +2
Query: 314 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 493
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 494 THIMFETFNTPAMYVCHSSRALAVRVRSYHPYLAGLPRRCLPHPCPFYEGYALPHAILR 670
T IMFETF+ PAMYV + L++ + + H P YEGYALPHAILR
Sbjct: 122 TQIMFETFSVPAMYVAIQA-VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
Score = 106 bits (254), Expect = 2e-23
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHEQK 321
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 178 bits (433), Expect = 4e-45
Identities = 85/119 (71%), Positives = 92/119 (77%)
Frame = +2
Query: 314 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 493
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPALLTEAPLNPKANREKM 121
Query: 494 THIMFETFNTPAMYVCHSSRALAVRVRSYHPYLAGLPRRCLPHPCPFYEGYALPHAILR 670
T IMFE+FN PAMYV + L++ + + H P YEGYALPHAILR
Sbjct: 122 TQIMFESFNVPAMYVAIQA-VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 179
Score = 106 bits (254), Expect = 2e-23
Identities = 47/60 (78%), Positives = 53/60 (88%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHEQK 321
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA ++
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 176 bits (429), Expect = 1e-44
Identities = 84/119 (70%), Positives = 91/119 (76%)
Frame = +2
Query: 314 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 493
+KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE+HPVLLTEAPLNPKANREKM
Sbjct: 61 AKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANREKM 120
Query: 494 THIMFETFNTPAMYVCHSSRALAVRVRSYHPYLAGLPRRCLPHPCPFYEGYALPHAILR 670
T IMFETFN PAMYV + L++ + + H P YEGY LPHAILR
Sbjct: 121 TQIMFETFNCPAMYVAIQA-VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYTLPHAILR 178
Score = 109 bits (262), Expect = 2e-24
Identities = 48/63 (76%), Positives = 55/63 (87%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 312
M DE++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 313 EQK 321
++
Sbjct: 61 AKR 63
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 176 bits (429), Expect = 1e-44
Identities = 84/119 (70%), Positives = 91/119 (76%)
Frame = +2
Query: 314 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 493
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP+NPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKM 120
Query: 494 THIMFETFNTPAMYVCHSSRALAVRVRSYHPYLAGLPRRCLPHPCPFYEGYALPHAILR 670
T IMFETFN PAMYV + L++ + + H P YEG+ LPHAILR
Sbjct: 121 TQIMFETFNCPAMYVAIQA-VLSLYASGRTTGIVLDSGDGVSHTVPIYEGFTLPHAILR 178
Score = 108 bits (259), Expect = 5e-24
Identities = 47/63 (74%), Positives = 55/63 (87%)
Frame = +1
Query: 133 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAH 312
M +E++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 313 EQK 321
++
Sbjct: 61 SKR 63
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 90.6 bits (215), Expect = 1e-18
Identities = 44/114 (38%), Positives = 63/114 (55%)
Frame = +2
Query: 329 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 508
L + YP+ +GIV +WDDM IW H FY+EL+V P E +LLT+ PLNP NREKM MF
Sbjct: 66 LDVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPPLNPVKNREKMIETMF 125
Query: 509 ETFNTPAMYVCHSSRALAVRVRSYHPYLAGLPRRCLPHPCPFYEGYALPHAILR 670
E +N +++ L++ + L + H P +G++ PH R
Sbjct: 126 EKYNFAGVFI-QVQAVLSLYAQGLLTGLVIDSGDGVTHVVPVVDGFSYPHITKR 178
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 157 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAHEQKRYP 330
+V DNG+G K GFAG++ P +VFP +VGRP R++ + D VG + +
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQL 66
Query: 331 DPQIP 345
D P
Sbjct: 67 DVSYP 71
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 335 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFET 514
L YPI +G V NWD ME+ W +N LR PE+H LLTE+PL P RE IMFET
Sbjct: 87 LSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTESPLTPPETREYTGEIMFET 146
Query: 515 FNTPAMYV-CHSSRALA 562
FN P +Y+ C ALA
Sbjct: 147 FNVPGLYIACQPVLALA 163
Score = 34.7 bits (76), Expect = 0.067
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 154 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 240
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVV 36
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 83.8 bits (198), Expect = 1e-16
Identities = 35/72 (48%), Positives = 47/72 (65%)
Frame = +2
Query: 323 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHI 502
G+ T K+PI HG V +WD ME+ W +N LR PEEH LLT++P++ +RE I
Sbjct: 82 GLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLTDSPVSTPESRECAGEI 141
Query: 503 MFETFNTPAMYV 538
MFETFN P +Y+
Sbjct: 142 MFETFNVPGLYI 153
Score = 34.3 bits (75), Expect = 0.089
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 154 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 240
A+V+DNG+G K GF+G+ P P++V
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVV 36
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 70.9 bits (166), Expect = 8e-13
Identities = 27/69 (39%), Positives = 43/69 (62%)
Frame = +2
Query: 344 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNT 523
P++ G VT+WD ++ IW+H F L + PEEHP+L+ E N REK +MFE +
Sbjct: 137 PMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKV 196
Query: 524 PAMYVCHSS 550
PA+++ ++
Sbjct: 197 PALFLAKNA 205
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +1
Query: 142 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 237
+EV+A+V+D GS CKAG+AGDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 51.6 bits (118), Expect = 5e-07
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +2
Query: 344 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 490
P++ G +WD ++ IW+H F L + PEEHP+L+ E N REK
Sbjct: 92 PMKDGTFIDWDIVDNIWNHAFRQRLLINPEEHPMLIVEPSTNTGQQREK 140
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/121 (24%), Positives = 51/121 (42%), Gaps = 7/121 (5%)
Frame = +2
Query: 329 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMF 508
+TL+ PI+ G + N + ++W N L+V P +LL E NP A + ++F
Sbjct: 60 MTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVF 119
Query: 509 ETFNTPAMYVCHSSRALAVRVRSYHPYL----AGLPRRC---LPHPCPFYEGYALPHAIL 667
E ++ V + + + S P L L C H P + + L +A+
Sbjct: 120 EELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVR 179
Query: 668 R 670
R
Sbjct: 180 R 180
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +1
Query: 157 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 249
+V+DNG G+ KAGF GD P AV P+ + +P
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKP 38
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/66 (28%), Positives = 36/66 (54%)
Frame = +2
Query: 335 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFET 514
++ P + +V ++ ME I F + HP+L+TE NP +R +M+ ++FET
Sbjct: 82 IRSPFDDDVVYQFEYMEYILDFGFDRLGATSEVGHPILMTECECNPSFSRARMSELLFET 141
Query: 515 FNTPAM 532
+ P++
Sbjct: 142 YGVPSI 147
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +1
Query: 157 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHEQKRYPD 333
+V+DNG+ + G+AG+ PR F +IV RPRH+ G+ + VGD +Y D
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHR----SSGETVTVVGDTDPALMKYFD 76
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +2
Query: 314 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 490
++R + + P++ G +WD ++ IW+H F PEEHP+L+ E N REK
Sbjct: 163 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYPEEHPMLIVEPSTNTGQQREK 217
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 314 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 490
++R + + P++ G +WD ++ IW+H F EEHP+L+ E N REK
Sbjct: 64 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYAEEHPMLIVEPSTNTGQQREK 118
>06_01_0486 - 3455030-3455770
Length = 246
Score = 35.5 bits (78), Expect = 0.039
Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 2/84 (2%)
Frame = +1
Query: 421 CRPRGTPSPAH*GSPQPQGQQREDDPHHVRNIQHARHVRLPFKP-CSRCTRPVVPPVSCW 597
C P G+ S +P G HH + +H H + P P C C P PP
Sbjct: 27 CPPPGSGSSGGGHHGKPPGSGSGGGGHHGKPPEHHHHHKPPPSPRCPSCHPPYTPPTPRP 86
Query: 598 TPA-TVSPTPVPILRRIRTPPRHP 666
P P+P P + PP P
Sbjct: 87 PPTPPYVPSPPPYVPPYIPPPTPP 110
>05_03_0342 - 12704683-12704736,12704827-12704895,12704969-12706003
Length = 385
Score = 32.3 bits (70), Expect = 0.36
Identities = 20/71 (28%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Frame = +1
Query: 442 SPAH*GSPQPQGQQREDDPHHVRNIQHARHVRLPFKPCSRCTR----PVVPPVSCWTPAT 609
SP S PQ + PH H +P +PC R P +PP P +
Sbjct: 3 SPYRLPSHSPQSKHANAIPHASARPTHLHTFLIPRRPCPPPVRPPDTPAMPPALTSNPPS 62
Query: 610 VSPTPVPILRR 642
P P+ RR
Sbjct: 63 FRPLSTPLTRR 73
>04_03_0904 + 20717005-20718087
Length = 360
Score = 31.9 bits (69), Expect = 0.48
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +1
Query: 436 TPSPAH*GSPQPQGQQREDDPHHVRNIQHARHVRLPFKPCSRCTRPV-VPPVSCWTPATV 612
TP+P +P+P+ +E P H H P KP P PP TP T
Sbjct: 34 TPTPVK-PAPKPEKPPKEHKPPH-------HHEPKPEKPPKEHKPPAYTPPKPTPTPPTY 85
Query: 613 SPTPVPILRRIRTPPRHPA 669
+PTP P P PA
Sbjct: 86 TPTPKPTPPPYTPKPTPPA 104
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/81 (24%), Positives = 29/81 (35%)
Frame = +1
Query: 424 RPRGTPSPAH*GSPQPQGQQREDDPHHVRNIQHARHVRLPFKPCSRCTRPVVPPVSCWTP 603
+P+ TP P + P+P P + P+ P T P P TP
Sbjct: 149 QPKPTPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTP--TPPSYKPQPKPTP 206
Query: 604 ATVSPTPVPILRRIRTPPRHP 666
+PTP P + + P P
Sbjct: 207 TPYTPTPTPPSYKPQPKPNPP 227
>03_05_0524 -
25181432-25181483,25181565-25181691,25181776-25181826,
25182159-25182314,25182405-25182905,25182999-25183713,
25183797-25183867,25183974-25184103,25185706-25186167
Length = 754
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 544 FKPCSRCTRPVVPPVSCWTPATVSPTPVPILRRIRTPPRHPA 669
++ C PV+P C +SP+P P+ + PP PA
Sbjct: 324 YRKCEGNVFPVLPAGGCEEVPALSPSPPPLHGSVMPPPLPPA 365
>12_02_1054 -
25721220-25721582,25723163-25723727,25724162-25724476,
25724492-25724772
Length = 507
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 5/50 (10%)
Frame = +2
Query: 503 MFETFNTPA-----MYVCHSSRALAVRVRSYHPYLAGLPRRCLPHPCPFY 637
+F TFN PA VC S A A VR HP + P P PC Y
Sbjct: 9 VFHTFNDPADLLRCAAVCRSWHAAAASVRERHPLFSRRP----PPPCLVY 54
>04_04_0512 + 25806599-25808080
Length = 493
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -2
Query: 582 WYDRTRTARARLEWQTYMAGVLNVSNMMWVIFS--LLALGLR--GASVSRTGCSSGATRS 415
W D T + A L W +AG +N++ + + S A GLR GA RT +S A +
Sbjct: 120 WRDMTDASAAALRWLRLIAGAINLAVAVLITMSERRAASGLRRSGAHGIRTTPNSEAMTT 179
Query: 414 SL*KV*CQIF 385
S K+ +F
Sbjct: 180 SSSKLDATLF 189
>01_07_0260 - 42364769-42364777,42364884-42365354
Length = 159
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 602 GVQQDTGGTTGRVQREHGLNGKRTW 528
G QD GG GR + HG G R W
Sbjct: 34 GEDQDGGGAAGRGEEVHGGGGPRRW 58
>11_02_0086 + 8186355-8186667,8186773-8187335
Length = 291
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = +1
Query: 208 DAPRAVFPSIVGRPRHQGVMVGMGQKDS---YVGDEAHEQKRYPDPQIP 345
D R +G+P H G + G+ K S +AH K+ P+P P
Sbjct: 63 DRDRDKLTYALGKPEHSGCVRGVSSKTSGKDGFKQDAHTYKKQPEPSYP 111
>03_05_0402 - 23851755-23851802,23852012-23852022,23853055-23853427
Length = 143
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 463 PQPQGQQREDDPHHVRNIQHARHVRLPFKPCSRCTRPVVPPVSCWTPATVSPTPVPIL 636
PQP E P+ ++ A H+R+P + VVPP + TP T SP+ ++
Sbjct: 29 PQPAPTSHEVCPYRCQSPSAANHIRIP-PQHAPAGAEVVPPSAGATPGT-SPSEAEVV 84
>07_03_0366 + 17321948-17322331
Length = 127
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 638 RRMGTGVGDTVAGVQQDTGGTTGRVQRE 555
RR G G+GDTV +Q G GR +R+
Sbjct: 25 RRRGGGIGDTVEAERQSRHGGGGRRRRQ 52
>03_01_0470 +
3619417-3619572,3619681-3619759,3620017-3620258,
3620804-3621148,3623592-3624116
Length = 448
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -3
Query: 254 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 135
WR P + + ARG S P + AL +P++ +++ H
Sbjct: 251 WRRTPWVGAHAARGGSRPLRRALQGLDPVTIAAIFSTAEH 290
>12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702
Length = 501
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +1
Query: 163 VDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAHEQKRYPD 333
++N S K GF + V +++G P H G + G+ K S+ H+ + D
Sbjct: 322 IENLSSSQKKGFFKPKREKDVLSTVLGTPEHGGRVRGVSSKMSWKEGFKHDPHKKRD 378
>10_08_0029 + 14270945-14271364,14271449-14272486
Length = 485
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -1
Query: 307 PHLLHKSPSVPY---RPSRPDGGAFPRSRGTRREEHHL 203
PHL P P+ +PSR GG PRS +R H+
Sbjct: 380 PHLPQPPPPPPHFERQPSRRRGGGVPRSVKMQRSSSHV 417
>05_05_0191 + 23127068-23127331,23127514-23127546
Length = 98
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/51 (23%), Positives = 21/51 (41%)
Frame = +2
Query: 374 DDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTHIMFETFNTP 526
D+ +++W + L+ E TEAP + + K H E + P
Sbjct: 30 DEAQRVWEAEMAHRLKETEELQSWAATEAPTKSEEEKRKRVHRKLEKLHRP 80
>04_04_1125 + 31085106-31085714
Length = 202
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +1
Query: 571 PVVPPVSCWTPATVSPTPVPILRRIRTPPRHPA 669
P P + WTP +P P P T P PA
Sbjct: 70 PTPPTPTPWTPTPATPPPTPATPATPTTPPTPA 102
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +1
Query: 541 PFKPCSRCTRPVVPPVSCWTPATVS---PTPVPILRRIRTPPRHPA 669
P P P PP WTP + PTP P TPP PA
Sbjct: 46 PPPPTPTPATPTTPPTP-WTPPPATPTPPTPTPWTPTPATPPPTPA 90
>04_01_0208 + 2596110-2596928
Length = 272
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -3
Query: 584 GGTTGRVQREHGLNGKRTWRA 522
G GR Q HG NG+R W+A
Sbjct: 242 GAGLGRGQNGHGNNGRRPWKA 262
>02_04_0179 +
20682852-20684510,20684593-20684661,20684741-20684809,
20686779-20688206
Length = 1074
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = -1
Query: 307 PHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEHHLLR 197
P K P P P PD A RSR TRR +LR
Sbjct: 212 PDEASKLPPPPAPPPAPDDDAASRSRSTRRRLVKVLR 248
>01_01_0586 - 4353919-4353973,4354623-4354940,4355043-4355323
Length = 217
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 505 VRNIQHARHVRLPFKPCSRC 564
V+N QH R LPF PC C
Sbjct: 193 VKNTQHPRAFELPFFPCMVC 212
>09_02_0227 - 6029995-6030277,6030456-6030502
Length = 109
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = -3
Query: 668 AGWRGGVRILRRMGTGVGDTVAGVQQDTGGTTGRVQREHG-LNGKRTWR 525
A WR GV +L R G G+G VA Q+ GG + G L WR
Sbjct: 38 ARWRHGVAVLGRSGVGLG--VALRQRGAGGGSATAVWGRGWLGSGAGWR 84
>08_01_1006 -
10191817-10191822,10192449-10192745,10192826-10192975,
10194558-10195370
Length = 421
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 281 CPIPTITP*WRGLPTIEGNTARGASSPAK 195
C +P P +RG P++ T RG + PA+
Sbjct: 142 CDMPLAPPGFRGFPSLVSLTLRGVTLPAE 170
>07_01_0720 + 5512638-5513141,5513588-5514607
Length = 507
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 421 TQLIVEGMMPNLLHVIPVSDDSVFDGVFEGQDTSFAHVPHLLHKSPS 281
T+L + +P+ L V P DD+ GV+ D SF V L K P+
Sbjct: 272 TELYTKPAIPSGLLVPPALDDNDI-GVYNRSDRSFVAVMQWLDKQPN 317
>06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312
Length = 270
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +1
Query: 538 LPFKPCSRCTRPVVPPVSCWTPATVSPTP 624
+P + S C P VPP+ +P+ +P P
Sbjct: 238 VPLQTFSMCNTPSVPPLMPQSPSAAAPAP 266
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 154 ALVVDNGSGMCKAGFA-GDDAPRAVFPS 234
A+VVD GS + KAG A D +P V PS
Sbjct: 3 AVVVDAGSKLLKAGIALPDQSPSLVMPS 30
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 4/33 (12%)
Frame = -1
Query: 265 SRPDGGA---FPRSRGTRREEHHL-LRNRPCTY 179
S+ D GA +P+ GT R+ H+ ++NRPC +
Sbjct: 1333 SKADAGASKTYPQQAGTIRKNGHIVIKNRPCKW 1365
>03_05_0735 - 27247767-27248285,27249030-27249318,27250594-27251093
Length = 435
Score = 27.9 bits (59), Expect = 7.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 292 KSPSVPYRPSRPDGGAFPR 236
+ P+V +RP+ PDGGA P+
Sbjct: 207 RCPTVQHRPTPPDGGAPPK 225
>02_03_0132 - 15584673-15584789,15584957-15585054,15585151-15585550
Length = 204
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 550 PCSRCTRPVVPPVSCWTPATVSPTPVPILRRIRTPP 657
P S + P P + +P+ SP P P +R+ +PP
Sbjct: 43 PRSGFSTPATAPRTAASPSPPSPAPSPQQQRVASPP 78
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,804,773
Number of Sequences: 37544
Number of extensions: 587340
Number of successful extensions: 2262
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 2071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2230
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -