Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1769
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X80198-1|CAA56489.1| 445|Homo sapiens MLN 64 protein. 45 2e-04
D38255-1|BAA22525.1| 445|Homo sapiens CAB1 protein. 45 2e-04
BT006964-1|AAP35610.1| 445|Homo sapiens START domain containing... 45 2e-04
BC025679-1|AAH25679.1| 445|Homo sapiens START domain containing... 45 2e-04
BC008747-1|AAH08747.1| 445|Homo sapiens START domain containing... 45 2e-04
BC008356-1|AAH08356.1| 445|Homo sapiens START domain containing... 45 2e-04
AB209772-1|BAD93009.1| 210|Homo sapiens steroidogenic acute reg... 45 2e-04
BC119643-1|AAI19644.1| 370|Homo sapiens keratin associated prot... 27 7.3
AB076354-1|BAD01541.1| 370|Homo sapiens keratin associated prot... 27 7.3
>X80198-1|CAA56489.1| 445|Homo sapiens MLN 64 protein.
Length = 445
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = -3
Query: 269 TEPAILIVQEIGDGVDLSYQVTAGGGRGIITPRDFVILRRTALLSREGRVVDDNPHGYIS 90
T A I+Q + D +SY V+AG G+++PRDFV +RR ++ Y+S
Sbjct: 313 TVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRR----------IERRRDRYLS 362
Query: 89 SGVSVQVPGYPPLKEMVR 36
SG++ PP + VR
Sbjct: 363 SGIATSHSAKPPTHKYVR 380
>D38255-1|BAA22525.1| 445|Homo sapiens CAB1 protein.
Length = 445
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = -3
Query: 269 TEPAILIVQEIGDGVDLSYQVTAGGGRGIITPRDFVILRRTALLSREGRVVDDNPHGYIS 90
T A I+Q + D +SY V+AG G+++PRDFV +RR ++ Y+S
Sbjct: 313 TVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRR----------IERRRDRYLS 362
Query: 89 SGVSVQVPGYPPLKEMVR 36
SG++ PP + VR
Sbjct: 363 SGIATSHSAKPPTHKYVR 380
>BT006964-1|AAP35610.1| 445|Homo sapiens START domain containing 3
protein.
Length = 445
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = -3
Query: 269 TEPAILIVQEIGDGVDLSYQVTAGGGRGIITPRDFVILRRTALLSREGRVVDDNPHGYIS 90
T A I+Q + D +SY V+AG G+++PRDFV +RR ++ Y+S
Sbjct: 313 TVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRR----------IERRRDRYLS 362
Query: 89 SGVSVQVPGYPPLKEMVR 36
SG++ PP + VR
Sbjct: 363 SGIATSHSAKPPTHKYVR 380
>BC025679-1|AAH25679.1| 445|Homo sapiens START domain containing 3
protein.
Length = 445
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = -3
Query: 269 TEPAILIVQEIGDGVDLSYQVTAGGGRGIITPRDFVILRRTALLSREGRVVDDNPHGYIS 90
T A I+Q + D +SY V+AG G+++PRDFV +RR ++ Y+S
Sbjct: 313 TVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRR----------IERRRDRYLS 362
Query: 89 SGVSVQVPGYPPLKEMVR 36
SG++ PP + VR
Sbjct: 363 SGIATSHSAKPPTHKYVR 380
>BC008747-1|AAH08747.1| 445|Homo sapiens START domain containing 3
protein.
Length = 445
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = -3
Query: 269 TEPAILIVQEIGDGVDLSYQVTAGGGRGIITPRDFVILRRTALLSREGRVVDDNPHGYIS 90
T A I+Q + D +SY V+AG G+++PRDFV +RR ++ Y+S
Sbjct: 313 TVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRR----------IERRRDRYLS 362
Query: 89 SGVSVQVPGYPPLKEMVR 36
SG++ PP + VR
Sbjct: 363 SGIATSHSAKPPTHKYVR 380
>BC008356-1|AAH08356.1| 445|Homo sapiens START domain containing 3
protein.
Length = 445
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = -3
Query: 269 TEPAILIVQEIGDGVDLSYQVTAGGGRGIITPRDFVILRRTALLSREGRVVDDNPHGYIS 90
T A I+Q + D +SY V+AG G+++PRDFV +RR ++ Y+S
Sbjct: 313 TVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRR----------IERRRDRYLS 362
Query: 89 SGVSVQVPGYPPLKEMVR 36
SG++ PP + VR
Sbjct: 363 SGIATSHSAKPPTHKYVR 380
>AB209772-1|BAD93009.1| 210|Homo sapiens steroidogenic acute
regulatory protein related variant protein.
Length = 210
Score = 45.2 bits (102), Expect = 2e-04
Identities = 26/78 (33%), Positives = 40/78 (51%)
Frame = -3
Query: 269 TEPAILIVQEIGDGVDLSYQVTAGGGRGIITPRDFVILRRTALLSREGRVVDDNPHGYIS 90
T A I+Q + D +SY V+AG G+++PRDFV +RR ++ Y+S
Sbjct: 78 TVTACQILQRVEDNTLISYDVSAGAAGGVVSPRDFVNVRR----------IERRRDRYLS 127
Query: 89 SGVSVQVPGYPPLKEMVR 36
SG++ PP + VR
Sbjct: 128 SGIATSHSAKPPTHKYVR 145
>BC119643-1|AAI19644.1| 370|Homo sapiens keratin associated protein
10-7 protein.
Length = 370
Score = 27.1 bits (57), Expect(2) = 7.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 319 CCLPVCYLLLLTGGKTSC 372
CC PVC + + +G TSC
Sbjct: 270 CCKPVCCVPVCSGASTSC 287
Score = 21.4 bits (43), Expect(2) = 7.3
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 310 QGSCCLPVC 336
Q +CC+PVC
Sbjct: 225 QQACCVPVC 233
>AB076354-1|BAD01541.1| 370|Homo sapiens keratin associated protein
protein.
Length = 370
Score = 27.1 bits (57), Expect(2) = 7.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 319 CCLPVCYLLLLTGGKTSC 372
CC PVC + + +G TSC
Sbjct: 270 CCKPVCCVPVCSGASTSC 287
Score = 21.4 bits (43), Expect(2) = 7.3
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +1
Query: 310 QGSCCLPVC 336
Q +CC+PVC
Sbjct: 225 QQACCVPVC 233
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,538,437
Number of Sequences: 237096
Number of extensions: 2356864
Number of successful extensions: 5416
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5400
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -