Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1768
         (494 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   2.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   3.5  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   6.1  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 2   NYARGHYTIGKEIVDLVLDRIRKLADQCTG 91
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 344  YGGRCHRWLHCRPSKH 297
            Y G C R+LHC   K+
Sbjct: 1287 YPGDCTRYLHCLWGKY 1302


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 3.5
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +2

Query: 317 EAIYDICRRNLDIERPTYTNLNRLIGQIV 403
           E I DIC R+ D       ++NR+ G I+
Sbjct: 510 EQIVDICIRSHDKLCDVCDSVNRIFGFII 538


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 7/33 (21%), Positives = 18/33 (54%)
 Frame = +2

Query: 335 CRRNLDIERPTYTNLNRLIGQIVSSITASLRFD 433
           C +     RPT+T L++ +  ++ ++   L+ +
Sbjct: 730 CWKECPKNRPTFTELSKSLEGLLENVAQYLQIE 762


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,831
Number of Sequences: 336
Number of extensions: 2184
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11630247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)