Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1768
(494 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 280 3e-76
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 280 3e-76
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 280 3e-76
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 280 3e-76
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 272 1e-73
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 272 1e-73
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 268 1e-72
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 268 2e-72
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 268 2e-72
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 267 3e-72
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 266 6e-72
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 256 8e-69
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 251 2e-67
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 251 2e-67
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 250 3e-67
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 243 6e-65
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 140 5e-34
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 138 2e-33
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 138 2e-33
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 137 5e-33
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 135 1e-32
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 135 1e-32
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 110 6e-25
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 110 6e-25
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 79 2e-15
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 79 2e-15
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 28 4.3
AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical... 28 4.3
Z82262-5|CAE17771.1| 679|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical pr... 27 9.9
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 280 bits (687), Expect = 3e-76
Identities = 134/164 (81%), Positives = 142/164 (86%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDY
Sbjct: 102 NYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 161
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKK+KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+ M DNEAIYDICRRNLDIER
Sbjct: 162 GKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIER 221
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
P+YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ L P +
Sbjct: 222 PSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 265
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 280 bits (687), Expect = 3e-76
Identities = 134/164 (81%), Positives = 142/164 (86%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDY
Sbjct: 101 NYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 160
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKK+KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+ M DNEAIYDICRRNLDIER
Sbjct: 161 GKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIER 220
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
P+YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ L P +
Sbjct: 221 PSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 264
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 280 bits (687), Expect = 3e-76
Identities = 134/164 (81%), Positives = 142/164 (86%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDY
Sbjct: 102 NYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 161
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKK+KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+ M DNEAIYDICRRNLDIER
Sbjct: 162 GKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIER 221
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
P+YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ L P +
Sbjct: 222 PSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 265
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 280 bits (687), Expect = 3e-76
Identities = 134/164 (81%), Positives = 142/164 (86%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FH LLMERLSVDY
Sbjct: 102 NYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDY 161
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKK+KLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDC+ M DNEAIYDICRRNLDIER
Sbjct: 162 GKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDIER 221
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
P+YTNLNRLIGQIVSSITASLRFDGALNVDLTEFQ L P +
Sbjct: 222 PSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRI 265
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 272 bits (666), Expect = 1e-73
Identities = 127/164 (77%), Positives = 139/164 (84%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDY
Sbjct: 100 NYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDY 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCA M DNEAIYDICRRNLD+ER
Sbjct: 160 GKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVER 219
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
P+YTNLNR+I Q+VSSITASLRFDGALNVDL EFQ L P +
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRI 263
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 272 bits (666), Expect = 1e-73
Identities = 127/164 (77%), Positives = 139/164 (84%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDY
Sbjct: 100 NYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDY 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCA M DNEAIYDICRRNLD+ER
Sbjct: 160 GKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDVER 219
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
P+YTNLNR+I Q+VSSITASLRFDGALNVDL EFQ L P +
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRI 263
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 268 bits (657), Expect = 1e-72
Identities = 125/164 (76%), Positives = 138/164 (84%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDY
Sbjct: 100 NYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDY 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCA M DNEAIYDICRRNL ++R
Sbjct: 160 GKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDR 219
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
P+YTNLNR+I Q+VSSITASLRFDGALNVDL EFQ L P +
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRI 263
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 268 bits (656), Expect = 2e-72
Identities = 124/164 (75%), Positives = 138/164 (84%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYT+GKE++D LDRIR+LAD C+GLQGF +FH LLMERLSVDY
Sbjct: 100 NYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDY 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCA M DNEAIYDIC+RNLD++R
Sbjct: 160 GKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDR 219
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
P+YTNLNR+I Q+VSSITASLRFDGALNVDL EFQ L P +
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRI 263
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 268 bits (656), Expect = 2e-72
Identities = 124/164 (75%), Positives = 138/164 (84%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYT+GKE++D LDRIR+LAD C+GLQGF +FH LLMERLSVDY
Sbjct: 100 NYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDY 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKKSKLEF+IYPAPQVSTAVVEPYNSILTTHTTLEHSDCA M DNEAIYDIC+RNLD++R
Sbjct: 160 GKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICKRNLDVDR 219
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
P+YTNLNR+I Q+VSSITASLRFDGALNVDL EFQ L P +
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRI 263
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 267 bits (654), Expect = 3e-72
Identities = 123/164 (75%), Positives = 138/164 (84%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYTIGKEI+D+V+DR+R+L + C GLQGFL+FH LLMERLSVDY
Sbjct: 107 NYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDY 166
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKKSKLEF IYPAPQVST++VEPYNSILTTHTTLEHSDC+ M DNEAIYDICRRNLD+ R
Sbjct: 167 GKKSKLEFCIYPAPQVSTSMVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLDLAR 226
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
PTYTNLNRLI Q++SS+TASLRFDGALNVDLTEFQ L P +
Sbjct: 227 PTYTNLNRLIAQVISSVTASLRFDGALNVDLTEFQTNLVPYPRI 270
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 266 bits (652), Expect = 6e-72
Identities = 124/164 (75%), Positives = 137/164 (83%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYT+GKE++D VLDRIR+LAD C+GLQGF +FH LLMERLSVDY
Sbjct: 100 NYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDY 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKKSKLEF+IYPAPQV TAVVEPYNSILTTHTTLEHSDCA M DNEAIYDICRRNL ++R
Sbjct: 160 GKKSKLEFSIYPAPQVCTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLSVDR 219
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
P+YTNLNR+I Q+VSSITASLRFDGALNVDL EFQ L P +
Sbjct: 220 PSYTNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRI 263
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 256 bits (626), Expect = 8e-69
Identities = 118/164 (71%), Positives = 133/164 (81%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYT+GKEI+D LDRIR+LA+ C GLQGF +FH +LMERLS +Y
Sbjct: 99 NYARGHYTVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEY 158
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKKSKLEF+IYPAPQ+ST+VVEPYNSILTTHTTLEHSDC+ M DNEAIYDICRRNL + R
Sbjct: 159 GKKSKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNEAIYDICRRNLRVSR 218
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
PTY NLNR+I Q+VSSITASLRFDGALNVDL EFQ L P +
Sbjct: 219 PTYNNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLVPYPRI 262
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 251 bits (615), Expect = 2e-67
Identities = 116/163 (71%), Positives = 134/163 (82%)
Frame = +2
Query: 5 YARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYG 184
YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH LLMERLS +YG
Sbjct: 109 YARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYG 168
Query: 185 KKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIERP 364
KK KLEFAIYPAPQVST++VEPYNSIL THTTLEHSDC M DNEAIYDICRRNLD+ RP
Sbjct: 169 KKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARP 228
Query: 365 TYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
TYTNLNRL+ QI+SSITASLRF+GALNVDLTEFQ L P +
Sbjct: 229 TYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRI 271
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 251 bits (615), Expect = 2e-67
Identities = 116/163 (71%), Positives = 134/163 (82%)
Frame = +2
Query: 5 YARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYG 184
YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH LLMERLS +YG
Sbjct: 81 YARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYG 140
Query: 185 KKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIERP 364
KK KLEFAIYPAPQVST++VEPYNSIL THTTLEHSDC M DNEAIYDICRRNLD+ RP
Sbjct: 141 KKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNEAIYDICRRNLDLARP 200
Query: 365 TYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
TYTNLNRL+ QI+SSITASLRF+GALNVDLTEFQ L P +
Sbjct: 201 TYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVPYPRI 243
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 250 bits (613), Expect = 3e-67
Identities = 117/164 (71%), Positives = 135/164 (82%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYTIGKE++D+VLDRIRK + C GLQGFL+FH LLMERLSV++
Sbjct: 105 NYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEF 164
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKKSKLEF++YPAPQVST+VVEPYNSILTTHTTLE SDC+ M DNEAIYD+CR+ L +ER
Sbjct: 165 GKKSKLEFSVYPAPQVSTSVVEPYNSILTTHTTLELSDCSFMVDNEAIYDLCRQKLHVER 224
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
P+Y+NLNRLI Q+VSSITASLRFDGALNVDL EFQ L P +
Sbjct: 225 PSYSNLNRLIAQVVSSITASLRFDGALNVDLNEFQTNLVPYPRI 268
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 243 bits (594), Expect = 6e-65
Identities = 110/164 (67%), Positives = 135/164 (82%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
NYARGHYTIGKE++D+V+DR+R+L ++C LQGFLIFH L+MERLS+DY
Sbjct: 102 NYARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDY 161
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
GKK+KLEF+IYPAPQ+ST++VEPYNS+LTTHTTLEHSDC+ + DNEAIY+I + NL +
Sbjct: 162 GKKAKLEFSIYPAPQISTSMVEPYNSLLTTHTTLEHSDCSFIMDNEAIYEITKVNLGVRS 221
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQN*LGALPPV 493
PTYT+LNRL+ Q+VSSITASLRFDGALNVDLTEFQ L P +
Sbjct: 222 PTYTHLNRLLAQVVSSITASLRFDGALNVDLTEFQTNLVPYPRI 265
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 140 bits (339), Expect = 5e-34
Identities = 66/151 (43%), Positives = 93/151 (61%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
N+A+GHYT G E+VD VLD +RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 100 NWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEY 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
+ + F++ P+P+VS VVEPYN+ L+ H +E++D DNEA+YDIC R L +
Sbjct: 160 PDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTT 219
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDL 454
PTY +LN L+ +S +T LRF G LN DL
Sbjct: 220 PTYGDLNHLVSMTMSGVTTCLRFPGQLNADL 250
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 138 bits (335), Expect = 2e-33
Identities = 66/151 (43%), Positives = 92/151 (60%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
N+A+GHYT G E+VD VLD +RK A+ C LQGF + H LL+ ++ +Y
Sbjct: 100 NWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
+ F++ P+P+VS VVEPYN+ L+ H +E++D DNEA+YDIC R L +
Sbjct: 160 PDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLSN 219
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDL 454
PTY +LN L+ +S +T LRF G LN DL
Sbjct: 220 PTYGDLNHLVSVTMSGVTTCLRFPGQLNADL 250
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 138 bits (335), Expect = 2e-33
Identities = 67/151 (44%), Positives = 92/151 (60%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
N+A+GHYT G E+VD VLD IRK A+ C LQGF + H LL+ ++ +Y
Sbjct: 100 NWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
+ F++ P+P+VS VVEPYN+ L+ H +E++D DNEA+YDIC R L +
Sbjct: 160 PDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTN 219
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDL 454
PTY +LN L+ +S +T LRF G LN DL
Sbjct: 220 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 250
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 137 bits (331), Expect = 5e-33
Identities = 66/151 (43%), Positives = 92/151 (60%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
N+A+GHYT G E+VD VLD IRK A+ C LQGF + H LL+ ++ ++
Sbjct: 100 NWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEF 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
+ F++ P+P+VS VVEPYN+ L+ H +E++D DNEA+YDIC R L +
Sbjct: 160 PDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTN 219
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDL 454
PTY +LN L+ +S +T LRF G LN DL
Sbjct: 220 PTYGDLNHLVSLTMSGVTTCLRFPGQLNADL 250
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 135 bits (327), Expect = 1e-32
Identities = 65/151 (43%), Positives = 91/151 (60%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
N+A+GHYT G E+VD VLD +RK A+ LQGF + H LL+ ++ +Y
Sbjct: 100 NWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
+ F++ P+P+VS VVEPYN+ L+ H +E++D DNEA+YDIC R L +
Sbjct: 160 PDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTT 219
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDL 454
PTY +LN L+ +S +T LRF G LN DL
Sbjct: 220 PTYGDLNHLVSATMSGVTTCLRFPGQLNADL 250
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 135 bits (327), Expect = 1e-32
Identities = 65/151 (43%), Positives = 91/151 (60%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
N+A+GHYT G E+VD VLD +RK A+ LQGF + H LL+ ++ +Y
Sbjct: 100 NWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEY 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIER 361
+ F++ P+P+VS VVEPYN+ L+ H +E++D DNEA+YDIC R L +
Sbjct: 160 PDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTT 219
Query: 362 PTYTNLNRLIGQIVSSITASLRFDGALNVDL 454
PTY +LN L+ +S +T LRF G LN DL
Sbjct: 220 PTYGDLNHLVSATMSGVTTCLRFPGQLNADL 250
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 110 bits (264), Expect = 6e-25
Identities = 61/152 (40%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
N++RG+Y G EIVD VL IR+ A+ L+GF + H LL+ +L +Y
Sbjct: 100 NWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEY 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIE- 358
K+ +I P+ +VS VVEPYN+IL+ +++ D DNEAI+DIC+ NL +E
Sbjct: 160 SDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLEN 219
Query: 359 RPTYTNLNRLIGQIVSSITASLRFDGALNVDL 454
R TY +LN L +S IT RF G L D+
Sbjct: 220 RVTYGDLNHLASLALSGITTFQRFKGNLKTDI 251
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 110 bits (264), Expect = 6e-25
Identities = 61/152 (40%), Positives = 86/152 (56%), Gaps = 1/152 (0%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
N++RG+Y G EIVD VL IR+ A+ L+GF + H LL+ +L +Y
Sbjct: 100 NWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEY 159
Query: 182 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIE- 358
K+ +I P+ +VS VVEPYN+IL+ +++ D DNEAI+DIC+ NL +E
Sbjct: 160 SDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNEAIFDICQYNLKLEN 219
Query: 359 RPTYTNLNRLIGQIVSSITASLRFDGALNVDL 454
R TY +LN L +S IT RF G L D+
Sbjct: 220 RVTYGDLNHLASLALSGITTFQRFKGNLKTDI 251
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 78.6 bits (185), Expect = 2e-15
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
N+A G Y G+E+ + ++D I + A+ L G L H LL+ERL +
Sbjct: 105 NWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAF 163
Query: 182 GKKSKLEFAIYPAPQVST-AVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIE 358
KK ++++ ST VV PYN +L+ +E+ D ++ DN A++ + +
Sbjct: 164 PKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTD 223
Query: 359 RPTYTNLNRLIGQIVSSITASLRFDGAL 442
PT+ ++N L+ +I+S+ TA RF+ A+
Sbjct: 224 TPTFDHINSLVARIMSTSTAPYRFNSAM 251
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 78.6 bits (185), Expect = 2e-15
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Frame = +2
Query: 2 NYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDY 181
N+A G Y G+E+ + ++D I + A+ L G L H LL+ERL +
Sbjct: 105 NWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAF 163
Query: 182 GKKSKLEFAIYPAPQVST-AVVEPYNSILTTHTTLEHSDCALMDDNEAIYDICRRNLDIE 358
KK ++++ ST VV PYN +L+ +E+ D ++ DN A++ + +
Sbjct: 164 PKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLIENPDHVVVLDNAALHRLAAGKFKTD 223
Query: 359 RPTYTNLNRLIGQIVSSITASLRFDGAL 442
PT+ ++N L+ +I+S+ TA RF+ A+
Sbjct: 224 TPTFDHINSLVARIMSTSTAPYRFNSAM 251
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 462 NSVRSTFRAPSNLKEAVIEETICP 391
+ VRST + PSN KE I + CP
Sbjct: 634 SQVRSTKKLPSNFKEDDIRHSTCP 657
>AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical
protein Y46G5A.24 protein.
Length = 529
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -2
Query: 232 GNLRRGVDGELQFRLLAVVNGEXLHQ*GSEPRAGTSTEGVEDQESLQTGTLVSELADSVQ 53
GNL V +L+F + N E HQ EP + EG+E+ + G L+ + S +
Sbjct: 435 GNLAGVVKADLKFGNHLIWNRENPHQICGEPIFVPNPEGIEEDD----GILIVPIMSSSE 490
Query: 52 NQI 44
Q+
Sbjct: 491 KQV 493
>Z82262-5|CAE17771.1| 679|Caenorhabditis elegans Hypothetical
protein C43F9.10 protein.
Length = 679
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 197 LEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 295
L F ++P VS + +NSI H EHSD
Sbjct: 84 LVFFLFPNTFVSMNMDSAWNSIFLYHNMAEHSD 116
>Z29560-5|CAA82664.1| 1385|Caenorhabditis elegans Hypothetical
protein K03H1.5 protein.
Length = 1385
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 468 FWNSVRSTFRAPSNLKEAVIEETIC 394
F S+R FR LK+ +E+TIC
Sbjct: 28 FVQSIRDIFRFQEQLKKENVEDTIC 52
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,986,920
Number of Sequences: 27780
Number of extensions: 213670
Number of successful extensions: 682
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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