Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1764
(381 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0014 - 12253341-12253358,12253520-12253729,12254388-122545... 38 0.003
06_03_1508 - 30653967-30654245,30654342-30654631,30654773-306548... 36 0.014
01_05_0658 - 24043655-24043945,24044003-24044257,24044359-240445... 35 0.025
03_01_0393 - 3062859-3062972,3063027-3063311,3063472-3063759,306... 32 0.13
01_05_0117 - 18300157-18301106,18301149-18301543,18302592-183026... 32 0.18
12_02_0985 + 25052753-25053691 31 0.41
01_01_0365 - 2859617-2859722,2860047-2860489,2862232-2862391,286... 31 0.41
01_05_0662 - 24103475-24103735,24103831-24104085,24104280-241044... 30 0.54
01_01_0134 - 1224084-1224269,1224578-1224662,1224763-1225050,122... 30 0.54
10_08_0173 + 15414628-15414890,15415001-15415074,15416322-154164... 30 0.71
09_02_0504 - 10013784-10014041,10014558-10014660,10014932-100150... 30 0.71
03_02_0582 + 9624481-9626844 30 0.71
11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680 29 0.94
09_04_0483 + 17979566-17980019,17980242-17980321,17980431-179808... 29 0.94
01_05_0659 - 24061318-24061575,24061664-24061918,24062001-240621... 29 0.94
09_02_0501 - 9955987-9956244,9956329-9956583,9956713-9956884,995... 29 1.2
09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991... 29 1.2
09_01_0131 - 1966406-1966425,1967469-1967901 29 1.2
01_05_0660 - 24071523-24071780,24071873-24072127,24072209-240723... 29 1.2
09_02_0068 - 3832858-3833228,3835773-3836223 29 1.6
05_01_0147 - 981697-983739 29 1.6
02_05_0319 - 27872601-27874457 29 1.6
08_02_0520 - 18121561-18121821,18122216-18122470,18122560-181227... 28 2.2
02_02_0654 - 12662931-12663200,12663296-12663550,12664097-126642... 28 2.2
02_02_0009 + 6068260-6068591,6068797-6068917,6069034-6069122,606... 28 2.2
01_03_0179 + 13500413-13500768,13502522-13502642,13502876-135029... 28 2.2
03_02_0583 + 9635002-9637299 24 2.6
09_04_0037 + 13992103-13992624,13993001-13993180,13993423-139936... 28 2.9
04_04_0582 + 26369537-26369914,26371598-26371887,26371985-263721... 27 3.8
09_04_0484 + 17990020-17990488,17990930-17991009,17991122-179915... 27 5.0
08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831 27 5.0
01_06_1264 + 35854600-35856849 27 5.0
08_02_1457 + 27260841-27260965,27261126-27261246,27263455-272635... 27 6.6
06_03_1038 + 27072405-27072407,27073306-27073501,27073674-270737... 27 6.6
03_06_0759 - 36059872-36059928,36059934-36060125,36060241-360603... 27 6.6
06_03_0710 + 23792138-23792293,23792974-23793257,23794344-237944... 26 8.7
03_05_0632 + 26264150-26264195,26266139-26266623,26266650-262667... 26 8.7
03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,449... 26 8.7
01_06_0556 + 30207124-30207581,30207692-30207901,30208016-302081... 26 8.7
>11_04_0014 -
12253341-12253358,12253520-12253729,12254388-12254523,
12254631-12254752,12254789-12254842,12254872-12255161,
12255737-12255948,12256008-12256475,12256560-12256856,
12257467-12258329,12258417-12258490,12258616-12258650,
12259024-12259087,12259452-12259733,12259870-12259946,
12260045-12260325
Length = 1160
Score = 37.9 bits (84), Expect = 0.003
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = +1
Query: 247 RQPVDLAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTVIMGP 381
R +++AF DLT + K + K +L+SV+G+LR G + +MGP
Sbjct: 452 RPVIEIAFKDLTLTL----KGSKKKLLRSVTGKLRPGRVAAVMGP 492
>06_03_1508 -
30653967-30654245,30654342-30654631,30654773-30654841,
30654854-30654921,30655016-30655492,30655578-30655874,
30655974-30656824,30656917-30656990,30657270-30657292,
30657709-30657772,30658098-30658370,30658511-30658587,
30658686-30658912
Length = 1022
Score = 35.5 bits (78), Expect = 0.014
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 247 RQPVDLAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTVIMGP 381
R +++AF DLT + K + K +L+SV+G+L G + +MGP
Sbjct: 423 RPRIEIAFKDLTLTL----KGSKKKLLRSVTGKLMPGRVAAVMGP 463
>01_05_0658 - 24043655-24043945,24044003-24044257,24044359-24044530,
24044617-24044844,24045688-24045821,24045908-24045991,
24046202-24046492,24046571-24046903,24047002-24047246,
24047476-24047742,24048305-24048465,24048556-24048872,
24048966-24049247,24049325-24049626,24049699-24049789,
24049881-24049934,24050028-24050104,24050192-24050367,
24051331-24051540,24051626-24052029
Length = 1457
Score = 34.7 bits (76), Expect = 0.025
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +1
Query: 139 TVINMDNVYILNNIGKGS-VKVTITPTQHKTLSHLPKRQPVDLAFTDLTYKV---QEGRK 306
T+ + +N+ I+ + G GS + PTQ + LP P+ L F D+ Y V QE +
Sbjct: 810 TMASSNNLAIVGSTGTGSEIADNSQPTQRGMV--LPFT-PLSLTFEDIKYSVDMPQEMKA 866
Query: 307 SNVKT----ILKSVSGRLRSGELTVIMG 378
+ +LK VSG R G LT +MG
Sbjct: 867 HGIVEDRLELLKGVSGCFRPGVLTALMG 894
>03_01_0393 -
3062859-3062972,3063027-3063311,3063472-3063759,
3063844-3064161,3064232-3064415,3064504-3064659,
3066394-3066620,3066734-3066804,3067090-3067534
Length = 695
Score = 32.3 bits (70), Expect = 0.13
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 PVDLAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTVIMGP 381
P+ L F ++ YKV K + IL +SG GE+ +MGP
Sbjct: 168 PIYLKFAEVKYKVAV--KGTPREILSGISGSAAPGEVLALMGP 208
>01_05_0117 - 18300157-18301106,18301149-18301543,18302592-18302681,
18303723-18303836,18303903-18304046,18316147-18316312,
18316396-18317130,18317219-18317422,18317496-18318177,
18318272-18318528,18318604-18319298,18319345-18319382,
18319847-18319928,18320018-18320112,18320443-18320526,
18320601-18320891,18321521-18321853,18321948-18322150,
18322243-18322399,18322482-18322585,18322675-18322835,
18323511-18323824,18324317-18324589,18324666-18324967,
18325459-18325549,18326140-18326190,18326700-18326768,
18326926-18327017,18327082-18327148,18328582-18328746,
18329027-18329103,18329572-18329766,18330208-18330275,
18331081-18331172,18331399-18331522,18331608-18331705,
18332384-18332997,18333620-18333626
Length = 2892
Score = 31.9 bits (69), Expect = 0.18
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Frame = +1
Query: 253 PVDLAFTDLTYKVQEGRKSNVKT-------ILKSVSGRLRSGELTVIMG 378
P+ L F D+ Y V ++ V ILK VSG R G LT +MG
Sbjct: 1092 PLSLTFNDIRYSVDMPKEKKVCAGTEDRLEILKGVSGAFRPGVLTALMG 1140
>12_02_0985 + 25052753-25053691
Length = 312
Score = 30.7 bits (66), Expect = 0.41
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +3
Query: 210 TYPAQDPQSPTEEAARGSGIYGLDLQSARGKEEQCQN 320
T PA DP P E++ GSGI GL + + +E C N
Sbjct: 184 TSPAPDPAKP--ESSSGSGIVGLFAEWKKLEEPSCDN 218
>01_01_0365 -
2859617-2859722,2860047-2860489,2862232-2862391,
2863431-2863516,2863648-2866272
Length = 1139
Score = 30.7 bits (66), Expect = 0.41
Identities = 21/89 (23%), Positives = 42/89 (47%)
Frame = +1
Query: 109 YRVLTKVLCSTVINMDNVYILNNIGKGSVKVTITPTQHKTLSHLPKRQPVDLAFTDLTYK 288
Y +L LC + D + + + + +KVT+ P + ++ K+ +D A L+
Sbjct: 376 YAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYP-YNSLINGYCKQGSLDRARGLLSGM 434
Query: 289 VQEGRKSNVKTILKSVSGRLRSGELTVIM 375
V+EG + ++G R+G+L+ M
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSCM 463
>01_05_0662 -
24103475-24103735,24103831-24104085,24104280-24104451,
24104535-24104762,24104864-24104997,24105101-24105184,
24105273-24105563,24105660-24105992,24106081-24106334,
24106435-24106591,24106674-24106777,24106879-24107039,
24107216-24107529,24107614-24107895,24107991-24108292,
24108367-24108457,24108566-24108619,24108785-24108861,
24108963-24109207,24109322-24109410,24110811-24111254
Length = 1443
Score = 30.3 bits (65), Expect = 0.54
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Frame = +1
Query: 253 PVDLAFTDLTYKVQ--EGRKSNVKT-----ILKSVSGRLRSGELTVIMG 378
P+ ++F D+ Y V E K+ T +LK VSG R G LT +MG
Sbjct: 842 PLSISFNDVRYSVDMPEAMKAQGITEDRLLLLKGVSGSFRPGVLTALMG 890
>01_01_0134 -
1224084-1224269,1224578-1224662,1224763-1225050,
1225114-1225334,1225511-1225642,1226218-1226494,
1226722-1226770,1226993-1227088,1227779-1227911,
1228241-1228391,1228484-1228674,1229167-1229382
Length = 674
Score = 30.3 bits (65), Expect = 0.54
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 253 PVDLAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTVIMGP 381
PV + + +T ++ R + +L + SG +SG L +MGP
Sbjct: 53 PVTIRWARITCALKNKRGDVARFLLSNASGEAKSGRLLALMGP 95
>10_08_0173 +
15414628-15414890,15415001-15415074,15416322-15416401,
15417186-15417231,15417334-15417368,15417751-15417771,
15418418-15419133,15419292-15419324,15419517-15419813,
15420213-15420659,15420738-15420886,15421408-15421697,
15421774-15421898,15422006-15422156
Length = 908
Score = 29.9 bits (64), Expect = 0.71
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +1
Query: 196 KVTITPTQHKTLSHLPKRQPVDLAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTVIM 375
K+T++ + +R ++ F LT + G+K +L+ V+G+L G +T IM
Sbjct: 290 KITLSGVVALAAENRSRRPMFEVVFKGLTLSI--GKKK----LLQCVTGKLSPGRVTAIM 343
Query: 376 GP 381
GP
Sbjct: 344 GP 345
>09_02_0504 -
10013784-10014041,10014558-10014660,10014932-10015093,
10015416-10015549,10015633-10015716,10015839-10016129,
10016362-10016694,10016823-10016965,10017273-10017429,
10017513-10017616,10017728-10017888,10017971-10018287,
10018396-10018677,10018759-10019226,10019338-10019391,
10019689-10019742,10019943-10020021,10020108-10020196,
10021153-10021273,10022321-10022637
Length = 1236
Score = 29.9 bits (64), Expect = 0.71
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Frame = +1
Query: 253 PVDLAFTDLTYKVQ--EGRKSNVKT-----ILKSVSGRLRSGELTVIMG 378
P+ + F D+ Y V E K+ T +LK +SG R G LT +MG
Sbjct: 766 PLSITFEDIRYSVDTPEAFKAKGMTEGRLELLKDISGSFRQGVLTALMG 814
>03_02_0582 + 9624481-9626844
Length = 787
Score = 29.9 bits (64), Expect = 0.71
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 16/55 (29%)
Frame = +1
Query: 262 LAFTDLTYKVQEGRKSN----------------VKTILKSVSGRLRSGELTVIMG 378
L FTDLTY V++ RK + ++T+L +SG R GE+ ++G
Sbjct: 121 LKFTDLTYSVKQRRKGSCLPFRRAAADEPELPAMRTLLDGISGEARDGEIMAVLG 175
>11_01_0499 - 3834300-3835255,3836703-3837540,3837636-3837680
Length = 612
Score = 29.5 bits (63), Expect = 0.94
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 298 GRKSNVKTILKSVSGRLRSGELTVIMGP 381
G +TILK ++G R GE+ ++GP
Sbjct: 50 GGAQEERTILKGITGEARPGEVLAVLGP 77
>09_04_0483 +
17979566-17980019,17980242-17980321,17980431-17980895,
17981460-17981597,17982574-17982660,17982781-17982909,
17983034-17983225,17983393-17983479,17983707-17984378
Length = 767
Score = 29.5 bits (63), Expect = 0.94
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 250 QPVDLAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTVIMGP 381
Q V LA+ DL G+ V IL ++G R GE+ IMGP
Sbjct: 96 QGVVLAWEDLWVSAAGGKSGRVP-ILCGLNGYARPGEVLAIMGP 138
>01_05_0659 - 24061318-24061575,24061664-24061918,24062001-24062172,
24062258-24062381,24062442-24062485,24063601-24063734,
24063822-24063905,24064100-24064390,24064713-24065045,
24065145-24065389,24065644-24065910,24065997-24066157,
24066253-24066569,24066665-24066946,24067024-24067325,
24067398-24067488,24067796-24067849,24067963-24068039,
24068159-24068318,24068653-24068737,24069029-24069238,
24069344-24069732
Length = 1444
Score = 29.5 bits (63), Expect = 0.94
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +1
Query: 139 TVINMDNVYILNNIGKGS-VKVTITPTQHKTLSHLPKRQPVDLAFTDLTYKV---QEGRK 306
T+ + N+ I++N S + PTQ + LP P+ L F ++ Y V QE +
Sbjct: 828 TMASSTNLAIVDNTETSSEIADNSQPTQRGMV--LPFA-PLSLTFDNIKYSVDMPQEMKA 884
Query: 307 SNVKT----ILKSVSGRLRSGELTVIMG 378
+ +LK VSG R G LT +MG
Sbjct: 885 HGIVEDRLELLKGVSGSFRPGVLTALMG 912
>09_02_0501 -
9955987-9956244,9956329-9956583,9956713-9956884,
9957000-9957227,9959102-9959235,9959319-9959402,
9959539-9959829,9960076-9960405,9960526-9960668,
9960970-9961126,9961210-9961313,9961423-9961583,
9961664-9961980,9962094-9962375,9962471-9962772,
9962848-9962938,9963262-9963338,9963428-9963587,
9963682-9963766,9963838-9963949,9964864-9964943,
9968644-9968981
Length = 1386
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +1
Query: 253 PVDLAFTDLTYKVQ--EGRKSNVKT----ILKSVSGRLRSGELTVIMG 378
P+ + F D+ Y + E K+ +LK +SG R G LT +MG
Sbjct: 787 PLSITFEDIKYSIDMPEALKTQATESRLELLKDISGSFRPGVLTALMG 834
>09_02_0499 -
9917891-9918148,9918240-9918494,9918769-9918940,
9919056-9919283,9919628-9919761,9919842-9919925,
9920007-9920297,9920569-9920901,9921029-9921171,
9921266-9921379,9921470-9921626,9921709-9921812,
9921914-9922074,9922158-9922474,9922574-9922855,
9923205-9923506,9923603-9923693,9923864-9923917,
9924052-9924128,9924213-9924372,9924473-9924557,
9924635-9924723,9925791-9925925
Length = 1341
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Frame = +1
Query: 253 PVDLAFTDLTYKVQ-------EGRKSNVKTILKSVSGRLRSGELTVIMG 378
P+ + F D+ Y V +G + +LK +SG R G LT +MG
Sbjct: 741 PLSITFEDIRYSVDMPEVIKAQGVTESRLELLKGISGSFRPGVLTALMG 789
>09_01_0131 - 1966406-1966425,1967469-1967901
Length = 150
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +1
Query: 319 TILKSVSGRLRSGELTVIMGP 381
TIL VSG R GE+ IMGP
Sbjct: 111 TILNGVSGSARPGEVLAIMGP 131
>01_05_0660 - 24071523-24071780,24071873-24072127,24072209-24072380,
24072458-24072685,24072785-24072918,24073005-24073088,
24073231-24073521,24073599-24073931,24074016-24074266,
24074354-24074620,24074707-24074867,24074978-24075294,
24075386-24075667,24075753-24076054,24076147-24076237,
24076326-24076379,24076497-24076573,24076700-24076859,
24077129-24077213,24077421-24077630,24077736-24078097
Length = 1457
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Frame = +1
Query: 253 PVDLAFTDLTYKV---QEGRKSNVKT----ILKSVSGRLRSGELTVIMG 378
P+ L+F ++ Y V QE + V +LK VSG R G LT +MG
Sbjct: 857 PLSLSFDNVRYSVDMPQEMKAQGVADDRLELLKGVSGSFRPGVLTALMG 905
>09_02_0068 - 3832858-3833228,3835773-3836223
Length = 273
Score = 28.7 bits (61), Expect = 1.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1
Query: 304 KSNVKTILKSVSGRLRSGELTVIMGP 381
+ TIL VSG R GE+ IMGP
Sbjct: 112 RGKAATILNGVSGCARPGEVLAIMGP 137
>05_01_0147 - 981697-983739
Length = 680
Score = 28.7 bits (61), Expect = 1.6
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 10/52 (19%)
Frame = +1
Query: 253 PVDLAFTDLTYKVQEGRKSNV----------KTILKSVSGRLRSGELTVIMG 378
P L FTDL+Y V R + K +L +SG R GE+ +MG
Sbjct: 24 PYALTFTDLSYTVGSRRAGLLPPLPTDAPPAKALLDGISGEARDGEVLAVMG 75
>02_05_0319 - 27872601-27874457
Length = 618
Score = 28.7 bits (61), Expect = 1.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 222 QDPQSPTEEAARGSGIYGLDLQSARGKEEQCQNDPQVCFGSAPFRRA 362
Q Q P + A G+G+ G L+ + G+ E+ Q QV A + R+
Sbjct: 31 QQSQQPRSDGAGGAGVTGGVLKRSLGEMERWQQQRQVAAQQAMYLRS 77
>08_02_0520 - 18121561-18121821,18122216-18122470,18122560-18122731,
18122824-18123105,18123159-18123292,18123425-18123508,
18123611-18123901,18123982-18124314,18124620-18124750,
18124826-18124930,18125011-18125167,18125248-18125351,
18125442-18125602,18125800-18126116,18126369-18126650,
18127011-18127312,18127609-18127699,18127771-18127824,
18128110-18128186,18128279-18128438,18128545-18128629,
18129059-18129367,18129514-18129890
Length = 1507
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Frame = +1
Query: 253 PVDLAFTDLTYKVQ-------EGRKSNVKTILKSVSGRLRSGELTVIMG 378
P+ +AF ++ Y V +G + +LK VSG R G LT +MG
Sbjct: 888 PLAVAFNNIRYSVDMPPEMKAQGVDQDRLLLLKGVSGSFRPGVLTALMG 936
>02_02_0654 -
12662931-12663200,12663296-12663550,12664097-12664268,
12664354-12664581,12664727-12664860,12665018-12665101,
12665332-12665538,12665641-12665973,12666175-12666281,
12666439-12666593,12666778-12666810,12666924-12666972,
12667152-12667312,12667413-12668313,12668391-12668481,
12668558-12668749
Length = 1123
Score = 28.3 bits (60), Expect = 2.2
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Frame = +1
Query: 250 QPVDLAFTDLTYKV-------QEGRKSNVKTILKSVSGRLRSGELTVIMG 378
QP+ L F L Y V Q+G + +L +SG R G LT ++G
Sbjct: 546 QPLSLCFNHLNYYVDMPSEMKQQGLMESRLQLLSDISGAFRPGLLTALVG 595
>02_02_0009 +
6068260-6068591,6068797-6068917,6069034-6069122,
6069207-6069291,6069421-6069580,6069667-6069743,
6069848-6069898,6069979-6070069,6070167-6070468,
6070549-6070830,6070911-6071388,6071457-6071560,
6071647-6071809,6071895-6072017,6072099-6072217,
6072304-6072636,6072713-6073003,6073088-6073171,
6073260-6073393,6073478-6073705,6073795-6073966,
6074062-6074316,6074408-6074668
Length = 1444
Score = 28.3 bits (60), Expect = 2.2
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Frame = +1
Query: 253 PVDLAFTDLTYKV---QEGRKSNVKT----ILKSVSGRLRSGELTVIMG 378
P+ + F ++ Y V QE + V +LK VSG R G LT +MG
Sbjct: 843 PLSITFDNIRYSVDMPQEMKDKGVTEDRLLLLKGVSGAFRPGVLTALMG 891
>01_03_0179 + 13500413-13500768,13502522-13502642,13502876-13502998,
13504409-13504497,13504612-13504696,13504852-13505011,
13505096-13505160,13505296-13505349,13505437-13505527,
13505685-13505986,13506084-13506365,13506451-13506764,
13506920-13507080,13507202-13507305,13507379-13507535,
13507652-13507896,13507995-13508327,13508428-13508751,
13508816-13508899,13509001-13509169,13509610-13509731,
13510538-13510792,13511115-13511252
Length = 1377
Score = 28.3 bits (60), Expect = 2.2
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 7/54 (12%)
Frame = +1
Query: 238 LPKRQPVDLAFTDLTYKVQ-------EGRKSNVKTILKSVSGRLRSGELTVIMG 378
LP Q + L+F D+ Y V +G +LK VSG R G LT +MG
Sbjct: 883 LPFAQ-LSLSFNDIKYSVDMPEAMTAQGVTEERLLLLKGVSGSFRPGVLTALMG 935
>03_02_0583 + 9635002-9637299
Length = 765
Score = 23.8 bits (49), Expect(2) = 2.6
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Frame = +1
Query: 148 NMDNVYILNNIGKGSVKVTITPTQHKT-----LSHLPK-RQPVD--LAFTDLTYKVQEGR 303
N+D +L + G V V + PT L P R PV LAF DLTY V R
Sbjct: 41 NLDQHVVLGSHSPGHVVVDLRPTAANVDGGGKLELDPVGRMPVHFVLAFHDLTYNVGRPR 100
Query: 304 K 306
+
Sbjct: 101 R 101
Score = 22.6 bits (46), Expect(2) = 2.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +1
Query: 322 ILKSVSGRLRSGELTVIMG 378
+L VSG R GE+ ++G
Sbjct: 131 LLDGVSGEAREGEIMAVLG 149
>09_04_0037 +
13992103-13992624,13993001-13993180,13993423-13993691,
13994120-13995773
Length = 874
Score = 27.9 bits (59), Expect = 2.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Frame = +1
Query: 262 LAFTDLTYKV-QEGRKSNVKT-----ILKSVSGRLRSGELTVIMGP 381
L F +L+Y V ++ +K VK +L +SG G++T I+GP
Sbjct: 98 LEFKNLSYSVVKKQKKEGVKVKKEVYLLNDISGEAPRGQVTAILGP 143
>04_04_0582 +
26369537-26369914,26371598-26371887,26371985-26372156,
26372271-26372393,26372499-26372627,26372785-26372979,
26373128-26373214,26373296-26373568,26374166-26374273,
26374363-26374686
Length = 692
Score = 27.5 bits (58), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 262 LAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTVIMGP 381
L + DL+ V G +T+L ++G G LT +MGP
Sbjct: 48 LTWKDLSVTVALG-PGKTQTVLDELTGYAEPGSLTALMGP 86
>09_04_0484 +
17990020-17990488,17990930-17991009,17991122-17991586,
17994670-17994756,17994887-17995018,17995102-17995293,
17995409-17995495,17995621-17996295
Length = 728
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 262 LAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTVIMGP 381
LA+ DL G + V IL ++G R GE+ IMGP
Sbjct: 105 LAWEDLWVSTAGGSRRRVP-ILCGLNGYARPGEVLAIMGP 143
>08_01_0442 + 3922402-3922707,3922940-3923816,3925741-3926831
Length = 757
Score = 27.1 bits (57), Expect = 5.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 316 KTILKSVSGRLRSGELTVIMGP 381
KTI+ +SG +R GE+ ++GP
Sbjct: 146 KTIISGMSGVVRPGEMLAMLGP 167
>01_06_1264 + 35854600-35856849
Length = 749
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = +1
Query: 247 RQPVDLAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTVIMG 378
R P+ +T + S + +L ++G R GE+ +MG
Sbjct: 105 RLPLQNRCDRVTAAAPDAHSSRARVLLDGITGEAREGEILAVMG 148
>08_02_1457 +
27260841-27260965,27261126-27261246,27263455-27263543,
27263776-27263860,27263970-27264074,27264446-27264527,
27264573-27264686,27265029-27265330,27265519-27266114,
27266216-27266376,27266489-27266592,27266697-27266856,
27266942-27267105,27267213-27267545,27267640-27267930,
27268276-27268359,27268430-27268563,27268665-27268892,
27268993-27269164,27269263-27269517,27269778-27270047
Length = 1324
Score = 26.6 bits (56), Expect = 6.6
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Frame = +1
Query: 250 QPVDLAFTDLTYKV---QEGRKSNVKT----ILKSVSGRLRSGELTVIMG 378
QP+ L F + Y V +E K V +L+ VSG R G LT +MG
Sbjct: 719 QPLSLVFDHINYFVDMPKEMTKYGVTDKKLQLLQDVSGAFRPGVLTALMG 768
>06_03_1038 +
27072405-27072407,27073306-27073501,27073674-27073750,
27073945-27073999,27074310-27074370,27074482-27074554,
27074948-27075538
Length = 351
Score = 26.6 bits (56), Expect = 6.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 171 QQYREGKRESDDHTYPAQDPQSPTEEAARGSGIYG 275
Q++R GK+ D + + +D AA SGI G
Sbjct: 92 QKFRLGKQHKDFNDHSVKDAMDMQRNAASSSGIMG 126
>03_06_0759 -
36059872-36059928,36059934-36060125,36060241-36060348,
36060440-36060712,36060923-36061009,36061085-36061276,
36061841-36061969,36062087-36062200,36062446-36062490,
36062785-36062956,36063229-36063515,36063989-36064456
Length = 707
Score = 26.6 bits (56), Expect = 6.6
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 292 QEGRKSNVKTILKSVSGRLRSGELTVIMGP 381
+ G S + ++KS +G G LTVIMGP
Sbjct: 87 RSGSGSADRRVVKSSTGYALPGTLTVIMGP 116
>06_03_0710 +
23792138-23792293,23792974-23793257,23794344-23794499,
23795318-23795804,23795864-23796181,23796773-23797165,
23797752-23798021
Length = 687
Score = 26.2 bits (55), Expect = 8.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 304 KSNVKTILKSVSGRLRSGELTVIMGP 381
+ + K ILK + G + GE+ +MGP
Sbjct: 84 QGSCKHILKGIGGSVDPGEILALMGP 109
>03_05_0632 +
26264150-26264195,26266139-26266623,26266650-26266739,
26266821-26267189
Length = 329
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/57 (21%), Positives = 28/57 (49%)
Frame = +1
Query: 181 GKGSVKVTITPTQHKTLSHLPKRQPVDLAFTDLTYKVQEGRKSNVKTILKSVSGRLR 351
G + + T PT ++ +R+ ++ F +L+ + + +K + TIL + +R
Sbjct: 166 GGSTTRKTSAPTLEHVVAERKRREKINQRFMELSAVIPKLKKMDKATILSDAASYIR 222
>03_01_0611 + 4493618-4493641,4494705-4494730,4495758-4497471,
4498179-4499263,4499351-4500296
Length = 1264
Score = 26.2 bits (55), Expect = 8.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +3
Query: 168 SQQYREGKRESDDHTYPAQDPQSP 239
S+ RE KR+ + H YPA SP
Sbjct: 949 SRSTREHKRDKETHKYPADIHNSP 972
>01_06_0556 + 30207124-30207581,30207692-30207901,30208016-30208100,
30208517-30208676,30208768-30208844,30208985-30209032,
30209504-30209594,30209703-30210004,30210214-30210495,
30210695-30211011,30211113-30211273,30211556-30211665,
30211752-30211902,30212438-30212578,30212688-30212857,
30213485-30213817,30213981-30214271,30214356-30214439,
30214620-30214753,30214946-30215173,30215273-30215444,
30215621-30215875,30215963-30216232
Length = 1509
Score = 26.2 bits (55), Expect = 8.7
Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Frame = +1
Query: 250 QPVDLAFTDLTYKVQ-------EGRKSNVKTILKSVSGRLRSGELTVIMG 378
+P+ ++F ++ Y V +G ++ +L +SG R G LT +MG
Sbjct: 904 EPLYMSFNEINYYVDMPLEMKSQGVTADKLQLLSGISGAFRPGVLTALMG 953
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,790,144
Number of Sequences: 37544
Number of extensions: 194912
Number of successful extensions: 621
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 624784784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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