Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1764
         (381 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    27   0.31 
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    27   0.31 
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    27   0.31 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   0.71 
CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein...    24   1.6  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    22   8.7  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    22   8.7  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    22   8.7  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 316 KTILKSVSGRLRSGELTVIMG 378
           K +LK+V+G  +SGEL  +MG
Sbjct: 113 KHLLKNVTGVAKSGELLAVMG 133


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 316 KTILKSVSGRLRSGELTVIMG 378
           K +LK+V+G  +SGEL  +MG
Sbjct: 113 KHLLKNVTGVAKSGELLAVMG 133


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = +1

Query: 316 KTILKSVSGRLRSGELTVIMG 378
           K +LK+V+G  +SGEL  +MG
Sbjct: 91  KHLLKNVTGVAKSGELLAVMG 111


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -2

Query: 194  TLPFPILLRIYTLSMFITVEHKTLVRTLYLNNSSALVYFKFNI 66
            T  + +  RI  LS  +      L   LY NNS +L  FKF +
Sbjct: 3248 TFYYQLCERIAALSDELEESRHILQHKLYSNNSQSLNNFKFGL 3290


>CR954257-15|CAJ14166.1|  271|Anopheles gambiae predicted protein
           protein.
          Length = 271

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 218 WVGVIVTFTLPFPILLRIYTLSMFITVEHKTLVRTLYL 105
           WVG +++  L    LL   TL M   +++ T    LYL
Sbjct: 172 WVGKLLSMLLHLAGLLLPITLQMLTFLKNHTKTALLYL 209


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 9/37 (24%), Positives = 21/37 (56%)
 Frame = -2

Query: 206 IVTFTLPFPILLRIYTLSMFITVEHKTLVRTLYLNNS 96
           I+ F +PF I++ + T++     +  ++ RT+ +  S
Sbjct: 290 ILVFVVPFTIIVVLNTITALTVWKFASIRRTMTIPRS 326


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 97  ELFKYRVLTKVLCSTVINMDNVYILNNIGKGSV 195
           E+F+     + LC T   +D VY+  N    S+
Sbjct: 198 EIFQSIFTDEGLCCTFNTLDTVYMFRNATAPSI 230


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +1

Query: 97  ELFKYRVLTKVLCSTVINMDNVYILNNIGKGSV 195
           E+F+     + LC T   +D VY+  N    S+
Sbjct: 198 EIFQSIFTDEGLCCTFNTLDTVYMFRNATAPSI 230


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,620
Number of Sequences: 2352
Number of extensions: 8267
Number of successful extensions: 222
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 222
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29074284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)