Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1764
(381 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 31 0.28
AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 29 1.1
Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z68215-8|CAA92454.1| 318|Caenorhabditis elegans Hypothetical pr... 28 2.6
U55375-2|AAC69044.2| 285|Caenorhabditis elegans Uncoordinated p... 28 2.6
EF538426-1|ABQ08183.1| 289|Caenorhabditis elegans stomatin-like... 28 2.6
Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical p... 27 3.4
Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical pr... 27 3.4
U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical pr... 27 3.4
U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical p... 27 3.4
AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine re... 27 3.4
Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical pr... 27 4.5
AC006692-8|AAF39973.1| 431|Caenorhabditis elegans Hypothetical ... 27 4.5
Z98866-7|CAB11549.1| 454|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical p... 26 7.9
Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical pr... 26 7.9
Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical pr... 26 7.9
AF098997-3|AAC68713.1| 348|Caenorhabditis elegans Serpentine re... 26 7.9
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 168 SQQYREGKRESDDHTYPAQDPQSPTEEAARGS 263
S Q + E D+H P +P PTEE A+ S
Sbjct: 572 SSQSSAAEEEDDEHVVPENEPVKPTEEFAKKS 603
>AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical
protein Y42G9A.6a protein.
Length = 684
Score = 29.1 bits (62), Expect = 1.1
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 286 KVQEGRKSNV-KTILKSVSGRLRSGELTVIMGP 381
KV + K +V K IL SV G R GE+T I+GP
Sbjct: 68 KVGDVEKMSVEKRILDSVFGVARPGEVTAIIGP 100
>Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical
protein T06E4.11 protein.
Length = 275
Score = 28.7 bits (61), Expect = 1.5
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +3
Query: 174 QYREGKRESDDHTYPAQDPQSPTEEAARGSGIYGLDLQSARGKEEQCQNDPQ 329
QY E +P Q PQ P ++ A G Y LQ + +Q Q PQ
Sbjct: 130 QYPEQGPGPIQQQFPQQYPQGPAQQQAPGPQQYPQGLQGSPQGSQQQQMPPQ 181
>Z68215-8|CAA92454.1| 318|Caenorhabditis elegans Hypothetical
protein C53B4.6 protein.
Length = 318
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = -2
Query: 218 WVGVIVTFTLPFPILLRIYTLSMFITVEHKTLVRTLYLNNSSALVYFKFNI*YPYFHCYK 39
WV + F +Y LS T + T+V TL S + + F + FH
Sbjct: 241 WVYIFAICLFQFACTKGVYMLSAVTTSLNVTMVLTLRKFFSLLISFIVFENVFNMFHIIG 300
Query: 38 RAFTFV 21
AF F+
Sbjct: 301 AAFVFI 306
>U55375-2|AAC69044.2| 285|Caenorhabditis elegans Uncoordinated
protein 1 protein.
Length = 285
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 254 GCLFGR*LRVLCWVGVIVTFTLPFPILLRI 165
G +FG L+ L W+ +IVTF + L++
Sbjct: 28 GTIFGYALQALSWILIIVTFPFSMCVCLKV 57
>EF538426-1|ABQ08183.1| 289|Caenorhabditis elegans stomatin-like
protein UNC-1 protein.
Length = 289
Score = 27.9 bits (59), Expect = 2.6
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 254 GCLFGR*LRVLCWVGVIVTFTLPFPILLRI 165
G +FG L+ L W+ +IVTF + L++
Sbjct: 32 GTIFGYALQALSWILIIVTFPFSMCVCLKV 61
>Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -2
Query: 182 PILLRIYTLSMFITVEHKTLVRTLYLNNSSA 90
PI++ I +L T E+ LV+TLY ++S++
Sbjct: 717 PIIIYINSLQFQTTPEYANLVKTLYTSSSAS 747
>Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -2
Query: 182 PILLRIYTLSMFITVEHKTLVRTLYLNNSSA 90
PI++ I +L T E+ LV+TLY ++S++
Sbjct: 717 PIIIYINSLQFQTTPEYANLVKTLYTSSSAS 747
>Z70204-1|CAA94111.1| 643|Caenorhabditis elegans Hypothetical
protein C11G6.1 protein.
Length = 643
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = -1
Query: 363 ELAG-TEPTRNRLEDRFD---IALPSLLHFVSQVRKCQIHGLPLR*VTEGLVLGRCDRHF 196
ELAG T+P N + F ++LP L + QV+ +H LP+ V + + D F
Sbjct: 61 ELAGRTKPVTNDVIAAFKHQKVSLPDLKDYAKQVKSEMLHALPVIPVPDQEIAKSDDNFF 120
Query: 195 HA 190
+
Sbjct: 121 RS 122
>U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical
protein C05D10.3 protein.
Length = 598
Score = 27.5 bits (58), Expect = 3.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 304 KSNVKTILKSVSGRLRSGELTVIMG 378
K VK IL +VSG SG+L I+G
Sbjct: 3 KRRVKEILHNVSGMAESGKLLAILG 27
>U00043-12|AAC77504.2| 613|Caenorhabditis elegans Hypothetical
protein T26A5.1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 3.4
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 253 PVDLAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTVIMG 378
PV L + ++T + ++ +LK+VSG +SGEL +MG
Sbjct: 31 PVSLHWNNITVTTIKEKR----LLLKNVSGYAKSGELLALMG 68
>AF016420-1|AAB65307.2| 310|Caenorhabditis elegans Serpentine
receptor, class sx protein11 protein.
Length = 310
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = -2
Query: 221 CWVGVIVTFTLPFPILLRIYTLSMFITVEHKTLVRTLYL----NNSSALVYFK 75
C G T L I +S+F+TV + L+RT YL NSS+L K
Sbjct: 152 CTPGFAFTIEASRIYKLFILLMSVFVTVIYAVLIRTFYLKGHHENSSSLKTMK 204
>Z69635-6|CAA93461.1| 695|Caenorhabditis elegans Hypothetical
protein F19B6.4 protein.
Length = 695
Score = 27.1 bits (57), Expect = 4.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 301 RKSNVKTILKSVSGRLRSGELTVIMG 378
+K + ILK + G R GELT IMG
Sbjct: 111 KKGVRQEILKKIDGVARPGELTFIMG 136
>AC006692-8|AAF39973.1| 431|Caenorhabditis elegans Hypothetical
protein T28F12.1 protein.
Length = 431
Score = 27.1 bits (57), Expect = 4.5
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +1
Query: 175 NIGKGSVKVTITPTQHKTLSHLPKRQPVDLAFTDLTYKVQEGRKS 309
N+ K S KV TP KT P R P D+T QE KS
Sbjct: 372 NMAKASPKVKKTPV--KTPGKQPGRSPAKPGMEDVTQLSQEKSKS 414
>Z98866-7|CAB11549.1| 454|Caenorhabditis elegans Hypothetical
protein Y49E10.9 protein.
Length = 454
Score = 26.6 bits (56), Expect = 6.0
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 262 LAFTDLTYKVQEGRKSNVK-TILKSVSGRLRSGELTVIMG 378
L + +T + + +K ++ IL V+GR +GELT IMG
Sbjct: 100 LTWKGITVEEIKKKKDTLQGRILDKVNGRALAGELTFIMG 139
>Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 159 RIYSQQYREGKRESDDHTYPAQDPQSPTEEAARGSGIYG 275
R+ S + E ++ + A+DP+ PT A+ G YG
Sbjct: 430 RVESAETEENIVKNLEKLQIAKDPEEPTTAASEGGNTYG 468
>Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 159 RIYSQQYREGKRESDDHTYPAQDPQSPTEEAARGSGIYG 275
R+ S + E ++ + A+DP+ PT A+ G YG
Sbjct: 430 RVESAETEENIVKNLEKLQIAKDPEEPTTAASEGGNTYG 468
>Z48007-2|CAA88053.2| 1118|Caenorhabditis elegans Hypothetical protein
R134.2 protein.
Length = 1118
Score = 26.2 bits (55), Expect = 7.9
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +1
Query: 139 TVINMDNVYILNNIGKGSVKVTITPTQHKTLSHLPKRQPVDLAFTDL--TYKVQEGRKSN 312
T+I VY + +IG G + V+ PT++ +H+ + + L F + ++K+ + N
Sbjct: 906 TIIEQHGVYKVESIGDGYLCVSGLPTRN-GYAHIKQIVDMSLKFMEYCRSFKIPHLPREN 964
Query: 313 VKTILKSVSGRLRSGELTVIM 375
V+ + SG +G + + M
Sbjct: 965 VELRIGVNSGPCVAGVVGLSM 985
>AF098997-3|AAC68713.1| 348|Caenorhabditis elegans Serpentine
receptor, class h protein71 protein.
Length = 348
Score = 26.2 bits (55), Expect = 7.9
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = -2
Query: 317 LTLLFLPSCTL*VKSVNARSTGCLFGR*LRVLCWVGVIVTFTLP 186
L +LF SC++ ++ S R L++ +VG+++ F +P
Sbjct: 226 LKILFFSSCSIYYLFISKSSRVSAQTRQLQIRSFVGIVIQFCIP 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,659,813
Number of Sequences: 27780
Number of extensions: 172239
Number of successful extensions: 527
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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