Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1763
         (530 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    50   4e-08
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   0.31 
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       27   0.39 
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    23   6.4  
AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprot...    23   8.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   8.4  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 50.4 bits (115), Expect = 4e-08
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = +2

Query: 77  MRECISVHVGQAGVQIGNACWE 142
           MRECISVHVGQAGVQIGN CW+
Sbjct: 1   MRECISVHVGQAGVQIGNPCWD 22



 Score = 41.1 bits (92), Expect = 2e-05
 Identities = 26/68 (38%), Positives = 28/68 (41%)
 Frame = +3

Query: 132 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXX 311
           P    T WS AS+   RCP+TR S      ST SS R   AST PV              
Sbjct: 19  PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78

Query: 312 XXAHTDSC 335
             A T SC
Sbjct: 79  APARTASC 86


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect(2) = 0.31
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 183 CPQTRPSGVETILSTLSSARPELAS 257
           C   RPS ++   ++ S  RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188



 Score = 21.8 bits (44), Expect(2) = 0.31
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 126 VMPAGSFTAWSTASSLMARCPQTRPSGV 209
           V+ AG F AW TA        +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 27.1 bits (57), Expect = 0.39
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
 Frame = -1

Query: 530 TPEPVPPPKGVEDQESLQTRVTLGQRACGILVQKPN---LRFPFQWCSDHGHSCWQHLPY 360
           T  PV P +GV+  E L       +RAC  L +KP     RF  +W      +C+ + PY
Sbjct: 266 TASPVEPEEGVDFYEELSYDNHPCKRAC-TLGRKPETCYYRFRLEWYRTLSKACY-NCPY 323


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 205 GWRRFFQHFLQRDRSWQAR 261
           GW   + HF QR R W  R
Sbjct: 12  GWLWIYLHFNQRYRFWVER 30


>AJ496389-1|CAD43035.1|  103|Anopheles gambiae mannosyl glycoprotein
           transferase protein.
          Length = 103

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +1

Query: 319 HIQTVVSSRTTYYW*GRCCQQLCPWSLHHW 408
           H   +  +RT +Y   RC +  C +  ++W
Sbjct: 66  HNMGMAFNRTMWYEIVRCARHFCEYDDYNW 95


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 106  PSRSPDR*CLLGALLPGARHPA*WPDAHRQDHR 204
            P+  P +  L+  +LP +  PA  P   R+D R
Sbjct: 1107 PAVEPAKKTLVATILPNSAKPAQQPPPLRRDAR 1139


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,897
Number of Sequences: 2352
Number of extensions: 12934
Number of successful extensions: 36
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)