Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1762
(504 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 159 1e-39
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 159 1e-39
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 159 1e-39
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 159 1e-39
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 159 1e-39
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 159 1e-39
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 159 1e-39
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 159 1e-39
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 159 1e-39
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 153 7e-38
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 151 3e-37
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 89 1e-18
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 82 2e-16
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 64 6e-11
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 54 6e-08
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 49 2e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 36 0.022
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 36 0.022
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.36
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.36
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.36
Z71185-7|CAA94907.2| 520|Caenorhabditis elegans Hypothetical pr... 28 4.4
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 159 bits (386), Expect = 1e-39
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGWILASLSTFQQMWISKQ 292
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG ILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 291 EYDESGPSIVHRKCF 247
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 159 bits (386), Expect = 1e-39
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGWILASLSTFQQMWISKQ 292
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG ILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 291 EYDESGPSIVHRKCF 247
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 159 bits (386), Expect = 1e-39
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGWILASLSTFQQMWISKQ 292
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG ILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 291 EYDESGPSIVHRKCF 247
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 159 bits (386), Expect = 1e-39
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGWILASLSTFQQMWISKQ 292
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG ILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 291 EYDESGPSIVHRKCF 247
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 159 bits (386), Expect = 1e-39
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGWILASLSTFQQMWISKQ 292
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG ILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 291 EYDESGPSIVHRKCF 247
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 159 bits (386), Expect = 1e-39
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGWILASLSTFQQMWISKQ 292
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG ILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 291 EYDESGPSIVHRKCF 247
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 159 bits (386), Expect = 1e-39
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGWILASLSTFQQMWISKQ 292
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG ILASLSTFQQMWISKQ
Sbjct: 258 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 317
Query: 291 EYDESGPSIVHRKCF 247
EYDESGPSIVHRKCF
Sbjct: 318 EYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 159 bits (386), Expect = 1e-39
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGWILASLSTFQQMWISKQ 292
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG ILASLSTFQQMWISKQ
Sbjct: 288 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 347
Query: 291 EYDESGPSIVHRKCF 247
EYDESGPSIVHRKCF
Sbjct: 348 EYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 159 bits (386), Expect = 1e-39
Identities = 74/75 (98%), Positives = 74/75 (98%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGWILASLSTFQQMWISKQ 292
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGG ILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 291 EYDESGPSIVHRKCF 247
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 153 bits (371), Expect = 7e-38
Identities = 73/75 (97%), Positives = 73/75 (97%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGWILASLSTFQQMWISKQ 292
GGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGG ILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 291 EYDESGPSIVHRKCF 247
EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 151 bits (366), Expect = 3e-37
Identities = 70/75 (93%), Positives = 72/75 (96%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGWILASLSTFQQMWISKQ 292
GGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGG ILASLSTFQQMWISKQ
Sbjct: 301 GGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 291 EYDESGPSIVHRKCF 247
EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 89.4 bits (212), Expect = 1e-18
Identities = 40/77 (51%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGWILASLSTFQQMWI 301
GG ++ G +R+ + P T+K+++ A P ERKY WIGG IL SL TFQQMW+
Sbjct: 359 GGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWV 418
Query: 300 SKQEYDESGPSIVHRKC 250
SK EYDESG SIV +KC
Sbjct: 419 SKAEYDESGKSIVEKKC 435
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/75 (46%), Positives = 52/75 (69%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGWILASLSTFQQMWISKQ 292
GGTT++ G DR+ E+ +AP+ KI+I A ER WIGG I+ASL TF++MW+ K+
Sbjct: 300 GGTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKK 359
Query: 291 EYDESGPSIVHRKCF 247
EY++ G S +H++ F
Sbjct: 360 EYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 64.1 bits (149), Expect = 6e-11
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 13/79 (16%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGWILASL 325
GGTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG +LA+L
Sbjct: 305 GGTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANL 364
Query: 324 --STFQQMWISKQEYDESG 274
Q W+SK+EY+E G
Sbjct: 365 MKDRDQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 54.0 bits (124), Expect = 6e-08
Identities = 24/71 (33%), Positives = 44/71 (61%)
Frame = -1
Query: 501 RTCTPTRYCPGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGWILASLS 322
RT Y GG ++ PGIA+++++E++ + P+T+ ++ P R + ++G I+AS S
Sbjct: 469 RTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASAS 528
Query: 321 TFQQMWISKQE 289
TF+ IS Q+
Sbjct: 529 TFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 48.8 bits (111), Expect = 2e-06
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 16/85 (18%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGW 340
GG+TM+ A ++Q+++ L+ P + +++I+ ++Y+VW GG
Sbjct: 330 GGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGS 389
Query: 339 ILASLSTFQQMWISKQEYDESGPSI 265
+LAS S F Q+ +K EY E GPSI
Sbjct: 390 MLASTSEFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 35.5 bits (78), Expect = 0.022
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGWILASLSTFQQMWI 301
GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI
Sbjct: 316 GGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWI 371
Query: 300 SKQEYDESGPSIVHRKCF*T 241
+++++DE G S+ F T
Sbjct: 372 NRKDWDERGDSLEFSNFFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 35.5 bits (78), Expect = 0.022
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Frame = -1
Query: 471 GGTTMYPGIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGWILASLSTFQQMWI 301
GG++ +PG +R+++E+ ++ P+ + + + P+ W G L L+ + WI
Sbjct: 316 GGSSCFPGFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWI 371
Query: 300 SKQEYDESGPSIVHRKCF*T 241
+++++DE G S+ F T
Sbjct: 372 NRKDWDERGDSLEFSNFFQT 391
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.36
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 352 PYGVLPLWRSNDLNLHCRWGESCD 423
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.36
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 352 PYGVLPLWRSNDLNLHCRWGESCD 423
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.36
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 352 PYGVLPLWRSNDLNLHCRWGESCD 423
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z71185-7|CAA94907.2| 520|Caenorhabditis elegans Hypothetical
protein C35A5.5 protein.
Length = 520
Score = 27.9 bits (59), Expect = 4.4
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 6/66 (9%)
Frame = -3
Query: 475 SGWYH---HVPWNRRPYAKGN---HSSRPIDNED*DHCSSREEVLRMDRWMDPRLPLYLP 314
S W H ++P NR +K N H +P+D + D S R M M +P
Sbjct: 363 SMWIHESWNIPTNRHHVSKSNYIIHMQKPVDPDGTDPVSYRMSNFEMLESMQLNASTLIP 422
Query: 313 TDVDLE 296
DLE
Sbjct: 423 IQDDLE 428
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,729,568
Number of Sequences: 27780
Number of extensions: 240307
Number of successful extensions: 728
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 723
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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