Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1761
(419 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 221 2e-58
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 221 2e-58
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 221 2e-58
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 219 9e-58
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 203 5e-53
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 200 4e-52
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 200 4e-52
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 199 8e-52
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 198 1e-51
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 198 1e-51
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 195 9e-51
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 195 9e-51
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 184 2e-47
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 181 2e-46
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 163 6e-41
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 139 6e-34
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 114 3e-26
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 114 3e-26
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 113 4e-26
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 113 5e-26
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 113 5e-26
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 107 4e-24
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 96 1e-20
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 96 1e-20
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 59 1e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 59 1e-09
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 31 0.44
Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical pr... 28 3.1
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 3.1
AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical... 27 5.5
Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical pr... 26 9.5
AC090999-24|AAK26151.1| 502|Caenorhabditis elegans Hypothetical... 26 9.5
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 221 bits (539), Expect = 2e-58
Identities = 94/114 (82%), Positives = 106/114 (92%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE I +H+GQAGVQIGNACWELYCLEHGIQPDGQMP+D ++GG DDSF+TF +ETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
HVPRAV VDLEPTV+DE+RTGTYR LFHP+ LITGKEDAANNYARGHYTIGKEI
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 221 bits (539), Expect = 2e-58
Identities = 94/114 (82%), Positives = 106/114 (92%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE I +H+GQAGVQIGNACWELYCLEHGIQPDGQMP+D ++GG DDSF+TF +ETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
HVPRAV VDLEPTV+DE+RTGTYR LFHP+ LITGKEDAANNYARGHYTIGKEI
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 221 bits (539), Expect = 2e-58
Identities = 94/114 (82%), Positives = 106/114 (92%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE I +H+GQAGVQIGNACWELYCLEHGIQPDGQMP+D ++GG DDSF+TF +ETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
HVPRAV VDLEPTV+DE+RTGTYR LFHP+ LITGKEDAANNYARGHYTIGKEI
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 114
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 219 bits (534), Expect = 9e-58
Identities = 93/113 (82%), Positives = 105/113 (92%)
Frame = +2
Query: 80 RECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGKH 259
RE I +H+GQAGVQIGNACWELYCLEHGIQPDGQMP+D ++GG DDSF+TF +ETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 260 VPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
VPRAV VDLEPTV+DE+RTGTYR LFHP+ LITGKEDAANNYARGHYTIGKEI
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEI 113
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 203 bits (495), Expect = 5e-53
Identities = 87/114 (76%), Positives = 100/114 (87%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE + +H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTF +ET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
HVPRA+FVDLEPTV+DEVRTGTY +LFHP+ LI+GKEDAANNYARGHYTIGKE+
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKEL 114
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 200 bits (487), Expect = 4e-52
Identities = 86/114 (75%), Positives = 103/114 (90%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE I +HVGQAGVQIGNACWELYCLEHGIQPDG MPT +T G +SF TF ++TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPR++FVDLEPTVVDE+RTGTY++LFHP+ +ITGKEDAANNYARGHYT+GKE+
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 200 bits (487), Expect = 4e-52
Identities = 86/114 (75%), Positives = 103/114 (90%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE I +HVGQAGVQIGNACWELYCLEHGIQPDG MPT +T G +SF TF ++TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPR++FVDLEPTVVDE+RTGTY++LFHP+ +ITGKEDAANNYARGHYT+GKE+
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 199 bits (485), Expect = 8e-52
Identities = 85/115 (73%), Positives = 100/115 (86%)
Frame = +2
Query: 74 KMRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTG 253
+ RE I +HVGQAGVQ+GNACWELYCLEHGIQPDG + ++++G DDSFNTF +ET G
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 254 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
KHVPRA+ VDLEPT +DE+RTGTY+ LFHP+ L+TGKEDAANNYARGHYTIGKEI
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEI 119
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 198 bits (484), Expect = 1e-51
Identities = 85/114 (74%), Positives = 101/114 (88%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE I +HVGQAGVQIGNACWELYCLEHGIQPDG MP+D G +SF TF ++TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPR++FVDLEPTVVDE+RTGTY++LFHP+ +ITGKEDAANNYARGHYT+GKE+
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 198 bits (484), Expect = 1e-51
Identities = 85/114 (74%), Positives = 101/114 (88%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE I +HVGQAGVQIGNACWELYCLEHGIQPDG MP+D G +SF TF ++TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPR++FVDLEPTVVDE+RTGTY++LFHP+ +ITGKEDAANNYARGHYT+GKE+
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 195 bits (476), Expect = 9e-51
Identities = 84/114 (73%), Positives = 100/114 (87%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE I +HVGQAGVQIGNACWELYCLEHGIQPDG MP++ GG SF TF ++TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPR++FVDLEPTVVDE+RTG Y++LFHP+ +ITGKEDAANNYARGHYT+GKE+
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 195 bits (476), Expect = 9e-51
Identities = 84/114 (73%), Positives = 100/114 (87%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE I +HVGQAGVQIGNACWELYCLEHGIQPDG MP++ GG SF TF ++TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPR++FVDLEPTVVDE+RTG Y++LFHP+ +ITGKEDAANNYARGHYT+GKE+
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKEL 112
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 184 bits (448), Expect = 2e-47
Identities = 81/114 (71%), Positives = 94/114 (82%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE I +HVGQAGVQIGNACWELYCLEHGI PDG T G S TF ++TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
HVPR++FVDLEPTVVDE+RTG Y++LFHP+ ++TGKEDAANNYARGHYT+GKEI
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEI 111
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 181 bits (440), Expect = 2e-46
Identities = 81/113 (71%), Positives = 92/113 (81%)
Frame = +2
Query: 80 RECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGKH 259
RE I +HVGQAGVQIGNACWEL+CLEHGIQPDG D+T ++ NTF ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 260 VPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
VPR +FVDLEPTVVDEVRTGTYR LFHP+ L++GKEDAAN YARG YTIG+E+
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREM 120
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 163 bits (395), Expect = 6e-41
Identities = 69/113 (61%), Positives = 84/113 (74%)
Frame = +2
Query: 80 RECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGKH 259
REC+ +H+GQAG QIGNACWELYC+EHG+ G + + S F +E+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 260 VPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
VPRA++VDLEPTV+DE+R G Y LFHP +I GKEDAANNYARGHYTIGKE+
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKEL 117
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 139 bits (337), Expect = 6e-34
Identities = 62/92 (67%), Positives = 73/92 (79%)
Frame = +2
Query: 143 LYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGKHVPRAVFVDLEPTVVDEVRTGT 322
++CLEHGIQPDG D+T ++ NTF ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 323 YRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
YR LFHP+ L++GKEDAAN YARG YTIG+E+
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREM 92
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 114 bits (274), Expect = 3e-26
Identities = 53/114 (46%), Positives = 72/114 (63%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE + + GQ G QIG+ WE+ EHGI P GQ D+ + + N + NE G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPRAV VDLEP +D VR+G + QLF P + + G+ A NN+A+GHYT G E+
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAEL 112
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 114 bits (274), Expect = 3e-26
Identities = 53/114 (46%), Positives = 72/114 (63%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE + + GQ G QIG+ WE+ EHGI P GQ D+ + + N + NE G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPRAV VDLEP +D VR+G + QLF P + + G+ A NN+A+GHYT G E+
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAEL 112
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 113 bits (273), Expect = 4e-26
Identities = 53/114 (46%), Positives = 72/114 (63%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE + V GQ G QIG+ WE+ EHGIQPDG ++ + + + + NE GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPRAV VDLEP +D VR+G + QLF P + + G+ A NN+A+GHYT G E+
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 113 bits (272), Expect = 5e-26
Identities = 54/114 (47%), Positives = 71/114 (62%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE + V GQ G QIG WE+ EHGIQPDG ++ + + N + NE GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPRAV VDLEP +D VR+G + QLF P + + G+ A NN+A+GHYT G E+
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 113 bits (272), Expect = 5e-26
Identities = 53/114 (46%), Positives = 71/114 (62%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + + NE GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPRAV VDLEP +D VR+G + QLF P + + G+ A NN+A+GHYT G E+
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 107 bits (256), Expect = 4e-24
Identities = 51/114 (44%), Positives = 67/114 (58%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
MRE + + GQ G QIG WE+ EHGI P G D+ + + N + NE GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPRA VDLEP +D VR G + QLF P + + G+ A NN+A+GHYT G E+
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAEL 112
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 95.9 bits (228), Expect = 1e-20
Identities = 48/114 (42%), Positives = 68/114 (59%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
M+E I V VGQ G QIG WE EHG+Q DG DN G + ++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPRA+ VDL+P ++ VR+ Y +LF P++ ++G+ A NN++RG+Y G EI
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEI 112
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 95.9 bits (228), Expect = 1e-20
Identities = 48/114 (42%), Positives = 68/114 (59%)
Frame = +2
Query: 77 MRECIFVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGK 256
M+E I V VGQ G QIG WE EHG+Q DG DN G + ++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 257 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPKHLITGKEDAANNYARGHYTIGKEI 418
+VPRA+ VDL+P ++ VR+ Y +LF P++ ++G+ A NN++RG+Y G EI
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEI 112
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 59.3 bits (137), Expect = 1e-09
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Frame = +2
Query: 95 VHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGKHVPRAV 274
VHVGQ G Q+ A W+ EHGI GQ ++ + +D + + +VPRAV
Sbjct: 10 VHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAV 66
Query: 275 FVDLEPTVVD-EVRTGTYRQLFHPKHLITGKE--DAANNYARGHYTIGKEI 418
VDLEP V++ +++ + LF+ ++ A NN+A G Y G+E+
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEV 116
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 59.3 bits (137), Expect = 1e-09
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Frame = +2
Query: 95 VHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGKHVPRAV 274
VHVGQ G Q+ A W+ EHGI GQ ++ + +D + + +VPRAV
Sbjct: 10 VHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAV 66
Query: 275 FVDLEPTVVD-EVRTGTYRQLFHPKHLITGKE--DAANNYARGHYTIGKEI 418
VDLEP V++ +++ + LF+ ++ A NN+A G Y G+E+
Sbjct: 67 LVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEV 116
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 30.7 bits (66), Expect = 0.44
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 105 AKPESRSVMPAGSFTAWSTASSLMARCPQTIPSGVETILSTLS*TRPELAST 260
A P MP+ S + S++SS M + P+ PS ++T+L+++ E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>Z50795-5|CAA90665.2| 705|Caenorhabditis elegans Hypothetical
protein R166.5a protein.
Length = 705
Score = 27.9 bits (59), Expect = 3.1
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 152 LEHGIQPDGQMPTDNTIGGGDDSFNTFLNETGTGKHVPRAVFVDLE 289
L H Q D +P ++ +GGG +F+ T +HV + F D E
Sbjct: 29 LNHLGQVDN-IPNNSAVGGGGAAFHHLHTSAATPRHVATSEFYDDE 73
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -2
Query: 367 FLTSNKVFWMKQLSVCASADLINNSRFKIDED 272
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical
protein Y113G7B.17 protein.
Length = 348
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 287 EPTVVDEVRTGTYR-QLFHPKHLITGK 364
E + DEVRT TYR ++H HL K
Sbjct: 38 EEMLKDEVRTTTYRNSIYHNSHLFKDK 64
>Z81526-6|CAB04263.1| 2144|Caenorhabditis elegans Hypothetical protein
F33H2.5 protein.
Length = 2144
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 170 PDGQMPTDNTIGGGDDSFNTFLNETGTGKHVPRAVFVDLEPTVVDEVR 313
P G +P D+ + G D F L ++G RA DL +D+VR
Sbjct: 1600 PIGNLPADHALFGLDLLFARNLQKSGHALWATRASRPDLGGKEMDDVR 1647
>AC090999-24|AAK26151.1| 502|Caenorhabditis elegans Hypothetical
protein Y82E9BR.1 protein.
Length = 502
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -3
Query: 237 FKKVLKESSPPPMVLSVGIWP 175
+K +L + PP+ LS+ IWP
Sbjct: 60 WKAILTDGEHPPLSLSIVIWP 80
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,189,891
Number of Sequences: 27780
Number of extensions: 220599
Number of successful extensions: 587
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 569
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -