Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1760
(543 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 38 0.005
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 37 0.012
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 36 0.028
05_01_0103 + 686770-687017,687120-687270 33 0.11
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 33 0.15
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 32 0.26
10_06_0152 - 11280532-11281427,11281501-11281971,11282512-11282569 30 1.0
07_03_0561 + 19485218-19485242,19485323-19486467,19487354-194874... 30 1.4
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 29 2.4
08_02_1170 + 24876197-24877070,24877563-24877606,24877805-248779... 29 2.4
07_03_1090 + 23891294-23892222,23892317-23892516,23895241-238954... 29 2.4
03_06_0479 + 34217170-34217172,34217337-34217786 29 2.4
04_04_0759 - 27832340-27832480,27832568-27832593,27832759-27834154 28 4.2
03_03_0131 - 14706123-14706171,14706364-14706422,14706504-147067... 28 4.2
12_02_0796 + 23224357-23224427,23225714-23225810,23226335-232271... 28 5.5
09_02_0252 - 6315834-6315959,6316074-6317018 27 7.3
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 27 7.3
03_02_0674 - 10329933-10331537 27 7.3
01_06_1522 - 37962431-37963060,37963216-37963542 27 7.3
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 27 9.7
07_03_1632 + 28271559-28271645,28272641-28272713,28273030-282733... 27 9.7
06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804 27 9.7
02_01_0695 - 5202091-5202498,5204103-5204588 27 9.7
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 37.9 bits (84), Expect = 0.005
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -1
Query: 543 KLFLMSWGPDTAKVKKKMLYS----RLVRRSEKVPCRSSEVHPSD 421
K+F SW PDTA+ + KMLY+ R R + + C PS+
Sbjct: 90 KIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQCEIQATDPSE 134
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -2
Query: 506 RSKKRCCTLGSFDALKKSLVGVQKYIQATDLSEASQEAV 390
R++ + S D ++ L G+Q IQATD SE S + +
Sbjct: 102 RTRSKMLYASSKDRFRRELDGIQCEIQATDPSEMSLDII 140
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 36.7 bits (81), Expect = 0.012
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = -1
Query: 543 KLFLMSWGPDTAKVKKKMLYS 481
K+F +SW PDT+KV+ KMLY+
Sbjct: 348 KIFFISWSPDTSKVRSKMLYA 368
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 35.5 bits (78), Expect = 0.028
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = -1
Query: 543 KLFLMSWGPDTAKVKKKMLYS 481
K+F +SW PDT++V+ KMLY+
Sbjct: 103 KIFFISWAPDTSRVRSKMLYA 123
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -2
Query: 506 RSKKRCCTLGSFDALKKSLVGVQKYIQATDLSEASQEAV 390
R + + S D K+ L G+Q +QATD SE S + V
Sbjct: 115 RVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIV 153
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 33.5 bits (73), Expect = 0.11
Identities = 10/21 (47%), Positives = 18/21 (85%)
Frame = -1
Query: 543 KLFLMSWGPDTAKVKKKMLYS 481
K+F ++W PDT++V+ KM+Y+
Sbjct: 77 KIFFIAWSPDTSRVRSKMIYA 97
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 33.1 bits (72), Expect = 0.15
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 543 KLFLMSWGPDTAKVKKKMLYSRLVRRSEK 457
++F + W PD AKV+ KMLY+ R +K
Sbjct: 103 RIFYILWSPDNAKVRSKMLYASSNERFKK 131
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 515 TPPRSKKRCCTL--GSFDALKKSLVGVQKYIQATDLSEASQEAV 390
+P +K R L S + KK L G+Q +QATD E S +A+
Sbjct: 110 SPDNAKVRSKMLYASSNERFKKELNGIQLEVQATDAGEISLDAL 153
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 32.3 bits (70), Expect = 0.26
Identities = 10/21 (47%), Positives = 17/21 (80%)
Frame = -1
Query: 543 KLFLMSWGPDTAKVKKKMLYS 481
K+F ++W P T++++ KMLYS
Sbjct: 90 KIFFIAWSPSTSRIRAKMLYS 110
>10_06_0152 - 11280532-11281427,11281501-11281971,11282512-11282569
Length = 474
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 504 VKKKMLYSRLVRRSEKVPCRSSEVHPSDRPFGSVSGGRLKEAPRHR 367
++++ L RL RRSE+ R + D G ++GGRL PR R
Sbjct: 81 MEEEYLLGRLGRRSEERAARRARRPGQDGGAGGLAGGRLGGLPRPR 126
>07_03_0561 +
19485218-19485242,19485323-19486467,19487354-19487476,
19487553-19487626,19487886-19487946,19488285-19488370,
19488795-19488864,19489026-19489122,19489342-19489481,
19490225-19490308,19490313-19490346,19491833-19491951
Length = 685
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 113 AAPPFKPKRITASRQK*AGGGGTYP 187
A PP +PKR+ R+K AGG G P
Sbjct: 82 APPPPQPKRLQGGRKKGAGGHGKLP 106
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 29.1 bits (62), Expect = 2.4
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -1
Query: 543 KLFLMSWGPDTAKVKKKMLYS 481
K+F ++W P ++++ KMLY+
Sbjct: 90 KIFFVAWSPSVSRIRAKMLYA 110
>08_02_1170 +
24876197-24877070,24877563-24877606,24877805-24877900,
24877999-24878544
Length = 519
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -1
Query: 153 REAVMRFGLKGGAAVVTIWVAHLCCRCL*LPVTT 52
R +++ G+ G A+V++W+ + C + +PV T
Sbjct: 140 RPSLLLLGVTGTTALVSMWIHNTACTVMMMPVAT 173
>07_03_1090 +
23891294-23892222,23892317-23892516,23895241-23895482,
23895771-23896461,23896486-23896562
Length = 712
Score = 29.1 bits (62), Expect = 2.4
Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Frame = -3
Query: 538 LPDVVGPGHRQGQKKDVVL*ARSTL*KSPLS---EFRSTSKRPTFRKRLRRPFKRSSAPP 368
+P VG RQ + A + PL+ E R K P R P + +P
Sbjct: 84 VPSDVGSSSRQHRSPPPSSTASDAIYLDPLTTLVEVRQHEKSPDLRPL---PLLKQPSPD 140
Query: 367 IANKQHLHTSSATKPNPLSDTPALTTRGHDT 275
+ L + P P TP LTT G+ T
Sbjct: 141 LRPLPPLKRPESQPPPPPPSTPPLTTTGYST 171
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -1
Query: 543 KLFLMSWGPDTAKVKKKMLYS 481
K+F +SW P A V+ KM+Y+
Sbjct: 95 KIFFVSWSPAAADVRSKMVYA 115
>04_04_0759 - 27832340-27832480,27832568-27832593,27832759-27834154
Length = 520
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -1
Query: 450 CRSSEVHPSDRPFGSVSGGRLKEAPRHRLPINS--IYTRALRRNRTRFPTLLP*RHAATT 277
C + P RPF +V L+ P P NS + R L R P+++ R A T
Sbjct: 321 CPAHVQRPQARPFNNVPPTPLRPRPATAAPTNSGNSFDRTLVMRRPPSPSVVQPRPAQET 380
Query: 276 P 274
P
Sbjct: 381 P 381
>03_03_0131 -
14706123-14706171,14706364-14706422,14706504-14706770,
14706857-14707114,14707207-14707629,14707942-14708514
Length = 542
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -3
Query: 391 FKRSSAPPIANKQHLHTSSATKPNPLSDTPALTTRGHDTTSRLVLLQRKTNSI 233
F+ +P I HL + K +P S P+ TTR +TSR+ L K SI
Sbjct: 334 FEDPVSPTINAAVHLQPRCSEKTDPESAIPSYTTRLLVSTSRIGCLIGKGGSI 386
>12_02_0796 +
23224357-23224427,23225714-23225810,23226335-23227146,
23227593-23227619,23227620-23229624
Length = 1003
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 342 VCKCCLLAIGGAELLLNGLLRRFRKVGRLDV 434
+C C GG + L+N L+ RK+GRL++
Sbjct: 760 LCWCISDIHGGTKTLVNNLVSSLRKLGRLNL 790
>09_02_0252 - 6315834-6315959,6316074-6317018
Length = 356
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -3
Query: 433 TSKRPTFRKR-LRRPFKRSSAP-PIANKQHLHTSSATKPNPLSDTPALTT 290
T++RP R R + + S+ P P+ + L TSS+ P+P + P T
Sbjct: 21 TTRRPRRRTREVSSRYLSSTTPGPVPSSPRLSTSSSRTPSPRAHRPRAAT 70
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 27.5 bits (58), Expect = 7.3
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -3
Query: 385 RSSAPPIANKQHLHTSSATKPNPLSDTPALTT 290
RSS+P Q LH+ + P PL TP +TT
Sbjct: 39 RSSSPTQTTLQQLHSPDSPPPPPL-PTPTVTT 69
>03_02_0674 - 10329933-10331537
Length = 534
Score = 27.5 bits (58), Expect = 7.3
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = -3
Query: 430 SKRPTFRKRLRRPFKRSSAPPI---ANKQHLHTSSATKPNPLSDTPALTTR 287
S R K + ++SAPP+ A + SATK NP PA+T R
Sbjct: 206 SSRVDLAKTSQPSLTKTSAPPVVAGARVKAPDMGSATKANPPKKLPAVTGR 256
>01_06_1522 - 37962431-37963060,37963216-37963542
Length = 318
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 18 MVGRAHSPPGVKWLLEAID 74
+VG+ H PPG +WL E +D
Sbjct: 44 LVGQLHLPPGGRWLDEYMD 62
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 27.1 bits (57), Expect = 9.7
Identities = 7/21 (33%), Positives = 15/21 (71%)
Frame = -1
Query: 543 KLFLMSWGPDTAKVKKKMLYS 481
K+F +SW P ++++ K +Y+
Sbjct: 96 KIFFISWSPSVSRIRAKTIYA 116
>07_03_1632 +
28271559-28271645,28272641-28272713,28273030-28273361,
28273455-28274791,28275451-28275848,28275963-28277644,
28277727-28277884,28278645-28278802,28279110-28279270,
28279826-28280014
Length = 1524
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -3
Query: 454 PLSEFRSTSKRPTFRKRLRRPFKRSSAPPIANKQHLHTSSATKPN 320
P S+++S SK + K R P NK+H + S A KP+
Sbjct: 821 PPSKYKSVSKYNSSEKSKRSKDGDVFLPEDKNKEHSYPSDAQKPD 865
>06_02_0341 + 14778915-14778961,14778982-14779860,14780101-14782804
Length = 1209
Score = 27.1 bits (57), Expect = 9.7
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = -2
Query: 512 PPRSKKRCCTLGSFDALKKSLVGVQKYIQAT-DLSEASQEAV*KKLR 375
PP ++ + G+F+ L VG+ K + +T D S AS KK R
Sbjct: 444 PPWPVRKRASSGAFEVLSSMPVGITKAVDSTSDASSASVHFKRKKAR 490
>02_01_0695 - 5202091-5202498,5204103-5204588
Length = 297
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 122 PFKPKRITASRQK*AGGGGTYP 187
PF P + A++ K AGGGG P
Sbjct: 203 PFYPTKANAAQSKAAGGGGCRP 224
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,213,969
Number of Sequences: 37544
Number of extensions: 390491
Number of successful extensions: 1287
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1287
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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