Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1760
         (543 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    26   0.70 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   1.2  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   1.2  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    24   2.8  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    23   4.9  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   4.9  

>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 19/70 (27%), Positives = 29/70 (41%)
 Frame = -3

Query: 382 SSAPPIANKQHLHTSSATKPNPLSDTPALTTRGHDTTSRLVLLQRKTNSINMIDFTGGRT 203
           +++ P+A K  L    A  P P +D P   TR   TT   V     ++S+N       R 
Sbjct: 285 ATSAPLAFKVPLDVLPAPFPGPSTDEPRTVTRKR-TTESDVESDASSSSMNSFTMVAKRK 343

Query: 202 SCESARVGTT 173
               ++  TT
Sbjct: 344 PGRPSKKATT 353


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
 Frame = +2

Query: 20  GWTSSQPTRC*VVTGSYRH--LQHKCATHIVTTAAPPFKPKR----ITASRQK*AGGGGT 181
           G  + Q  RC  +    +H   Q     H+  TA   + P+R    I   R   A GGG+
Sbjct: 132 GCNAGQTNRCSSLKDLIKHGETQAVIEIHLENTAFNAYDPERYGGRIICERTLNASGGGS 191

Query: 182 YPRGLTRGPTTS 217
           Y      G T S
Sbjct: 192 YKLKNEHGQTVS 203


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +3

Query: 105  LQRLPRPSNRNALLL---HGRNRQGAVVPTRADS 197
            LQRL R   R   L    HGRNR+    P+ AD+
Sbjct: 1143 LQRLYRQRAREGTLPTVPHGRNRRSRSAPSEADT 1176


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 13/52 (25%), Positives = 24/52 (46%)
 Frame = -3

Query: 454 PLSEFRSTSKRPTFRKRLRRPFKRSSAPPIANKQHLHTSSATKPNPLSDTPA 299
           P+++F  T  +PT ++ ++   K     PIA  Q L   +  K     + P+
Sbjct: 85  PINQFTQTLDKPTAQQVMKCWKKYRPENPIARVQRLKAKAEAKAAGKEEPPS 136


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 515 TPPRSKKRCCTLGSFDALKKSLV 447
           TPP +   C T+ +FDA  +  V
Sbjct: 29  TPPPTTANCTTVSTFDAALQECV 51


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 445  EFRSTSKRPTFRKRLRRPFKRSSAPPIANK 356
            E +   KRPT  +R+R  F R+   P   K
Sbjct: 916  ELKDKLKRPTPFERMRSFFSRTKPSPAGGK 945


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,038
Number of Sequences: 2352
Number of extensions: 13252
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)