Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1759
(597 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F6C1 Cluster: Cytidine deaminase; n=1; Bombyx mori|Re... 306 3e-82
UniRef50_Q0IF52 Cluster: Cytidine deaminase, putative; n=1; Aede... 149 5e-35
UniRef50_UPI0000D56D92 Cluster: PREDICTED: similar to CG8360-PA;... 126 5e-28
UniRef50_Q892S1 Cluster: Cytidine deaminase; n=9; Clostridiales|... 115 7e-25
UniRef50_P32320 Cluster: Cytidine deaminase; n=36; cellular orga... 115 1e-24
UniRef50_A0CU43 Cluster: Chromosome undetermined scaffold_28, wh... 114 1e-24
UniRef50_Q97IU6 Cluster: Cytidine deaminase, cdd; n=10; Clostrid... 113 3e-24
UniRef50_Q20628 Cluster: Cytidine deaminase protein 2; n=5; Chro... 113 3e-24
UniRef50_Q9S3M0 Cluster: Cytidine deaminase; n=4; cellular organ... 112 7e-24
UniRef50_A4XLW2 Cluster: Cytidine deaminase; n=2; Bacteria|Rep: ... 111 9e-24
UniRef50_Q8T8Y3 Cluster: AT17318p; n=5; Sophophora|Rep: AT17318p... 109 6e-23
UniRef50_UPI00015B5AD1 Cluster: PREDICTED: similar to GA21017-PA... 108 8e-23
UniRef50_P19079 Cluster: Cytidine deaminase; n=51; Bacteria|Rep:... 105 8e-22
UniRef50_Q5U3F7 Cluster: Zgc:103586; n=3; cellular organisms|Rep... 104 1e-21
UniRef50_Q5KX12 Cluster: Cytidine deaminase; n=6; Firmicutes|Rep... 103 3e-21
UniRef50_Q22922 Cluster: Cytidine deaminase protein 1; n=1; Caen... 103 4e-21
UniRef50_A7SFK0 Cluster: Predicted protein; n=3; Eumetazoa|Rep: ... 102 6e-21
UniRef50_Q04D97 Cluster: Cytidine deaminase; n=3; Lactobacillale... 101 1e-20
UniRef50_Q73LD4 Cluster: Cytidine deaminase; n=14; Bacteria|Rep:... 99 4e-20
UniRef50_Q9WZV0 Cluster: Cytidine/deoxycytidine deaminase; n=3; ... 97 3e-19
UniRef50_Q9YD74 Cluster: Cytidine deaminase; n=1; Aeropyrum pern... 97 3e-19
UniRef50_Q9CFM8 Cluster: Cytidine deaminase; n=4; Lactobacillale... 96 6e-19
UniRef50_A0IPH3 Cluster: Cytidine deaminase; n=1; Serratia prote... 95 1e-18
UniRef50_Q18YY0 Cluster: Cytidine deaminase; n=2; Desulfitobacte... 94 2e-18
UniRef50_Q098R8 Cluster: Cytidine deaminase; n=2; Cystobacterine... 94 3e-18
UniRef50_Q7R4V0 Cluster: GLP_440_14085_14489; n=1; Giardia lambl... 94 3e-18
UniRef50_Q5ZVK5 Cluster: Cytidine deaminase; n=4; Legionella pne... 93 6e-18
UniRef50_A5M7S1 Cluster: Cytidine deaminase; n=4; Streptococcus ... 93 6e-18
UniRef50_Q9KD53 Cluster: Cytidine deaminase; n=39; Bacteria|Rep:... 91 1e-17
UniRef50_A7H832 Cluster: Cytidine deaminase; n=8; cellular organ... 91 2e-17
UniRef50_Q49Y11 Cluster: Cytidine deaminase; n=16; Staphylococcu... 90 4e-17
UniRef50_A6VSZ1 Cluster: Cytidine deaminase; n=2; Proteobacteria... 90 4e-17
UniRef50_A3GEY6 Cluster: Predicted protein; n=2; Saccharomycetal... 89 6e-17
UniRef50_A2QHH3 Cluster: Catalytic activity: Cytidine + H(2)O <=... 89 6e-17
UniRef50_Q6CQB3 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 89 7e-17
UniRef50_Q9HR24 Cluster: Cytidine aminohydrolase; n=5; Halobacte... 89 1e-16
UniRef50_Q28N08 Cluster: Cytidine deaminase homotetrameric; n=14... 88 1e-16
UniRef50_Q15XS0 Cluster: Cytidine deaminase; n=1; Pseudoalteromo... 88 2e-16
UniRef50_A6LY34 Cluster: Cytidine deaminase; n=1; Clostridium be... 88 2e-16
UniRef50_A1RTH5 Cluster: Cytidine deaminase; n=3; Thermoproteace... 87 2e-16
UniRef50_Q54I82 Cluster: Cytidine deaminase; n=1; Dictyostelium ... 87 3e-16
UniRef50_Q483R7 Cluster: Cytidine deaminase; n=2; Bacteria|Rep: ... 87 4e-16
UniRef50_Q23RA3 Cluster: Cytidine deaminase family protein; n=1;... 87 4e-16
UniRef50_Q0FCJ3 Cluster: Cytidine deaminase; n=1; alpha proteoba... 85 1e-15
UniRef50_A6NW26 Cluster: Putative uncharacterized protein; n=1; ... 85 1e-15
UniRef50_A5E806 Cluster: Cytidine deaminase; n=1; Lodderomyces e... 85 1e-15
UniRef50_Q06549 Cluster: Cytidine deaminase; n=2; Saccharomyces ... 85 1e-15
UniRef50_Q11C52 Cluster: Cytidine deaminase precursor; n=9; Rhiz... 84 2e-15
UniRef50_Q1GGB1 Cluster: Cytidine deaminase homotetrameric; n=8;... 84 3e-15
UniRef50_Q0YN38 Cluster: Cytidine deaminase, homotetrameric; n=1... 83 4e-15
UniRef50_A7TIX7 Cluster: Putative uncharacterized protein; n=1; ... 83 5e-15
UniRef50_Q6MKE7 Cluster: Cdd protein; n=1; Bdellovibrio bacterio... 82 8e-15
UniRef50_A1DAY5 Cluster: Cytidine deaminase, putative; n=2; Tric... 82 8e-15
UniRef50_Q39PA5 Cluster: Cytidine deaminase, homotetrameric; n=8... 81 2e-14
UniRef50_A4YCQ0 Cluster: Cytidine deaminase; n=1; Metallosphaera... 81 2e-14
UniRef50_A7DID0 Cluster: Cytidine deaminase; n=3; Methylobacteri... 81 3e-14
UniRef50_A5V1H6 Cluster: Cytidine deaminase; n=5; Bacteria|Rep: ... 81 3e-14
UniRef50_P47718 Cluster: Cytidine deaminase; n=1; Mycoplasma pir... 80 3e-14
UniRef50_Q839J0 Cluster: Cytidine deaminase; n=4; Lactobacillale... 80 4e-14
UniRef50_Q8EWU5 Cluster: Cytidine deaminase; n=1; Mycoplasma pen... 79 6e-14
UniRef50_A5IXQ5 Cluster: Cytidine deaminase; n=3; Mycoplasma|Rep... 79 8e-14
UniRef50_A4B6B1 Cluster: Cytidine deaminase; n=1; Alteromonas ma... 79 8e-14
UniRef50_Q4A8K8 Cluster: Cytidine deaminase; n=3; Mycoplasma hyo... 78 1e-13
UniRef50_Q3A1I3 Cluster: Cytidine deaminase; n=1; Pelobacter car... 78 2e-13
UniRef50_Q1AVV9 Cluster: Cytidine deaminase, homotetrameric; n=2... 78 2e-13
UniRef50_A4BK15 Cluster: Cytidine deaminase; n=1; Reinekea sp. M... 77 2e-13
UniRef50_Q7NUX7 Cluster: Cytidine deaminase; n=1; Chromobacteriu... 77 3e-13
UniRef50_Q6F1X4 Cluster: Cytidine deaminase; n=2; Entomoplasmata... 77 3e-13
UniRef50_A2BL19 Cluster: Cytidine deaminase; n=2; Desulfurococca... 77 3e-13
UniRef50_A7JH10 Cluster: Cytidine deaminase; n=11; Francisella t... 76 6e-13
UniRef50_A2FCA3 Cluster: Cytidine deaminase family protein; n=2;... 76 6e-13
UniRef50_A7ERM8 Cluster: Putative uncharacterized protein; n=1; ... 76 6e-13
UniRef50_Q1NAQ1 Cluster: Cytidine deaminase; n=2; Sphingomonas|R... 76 7e-13
UniRef50_Q9PPV9 Cluster: Cytidine deaminase; n=1; Ureaplasma par... 75 1e-12
UniRef50_Q5KJY3 Cluster: Cytidine deaminase, putative; n=2; Filo... 75 1e-12
UniRef50_A2U062 Cluster: Cytidine deaminase; n=7; Flavobacteria|... 74 3e-12
UniRef50_Q4QEF8 Cluster: Cytidine deaminase-like protein; n=6; T... 74 3e-12
UniRef50_A1ZMX8 Cluster: Cytidine deaminase; n=2; Bacteroidetes|... 73 5e-12
UniRef50_Q7NAQ2 Cluster: Cdd; n=1; Mycoplasma gallisepticum|Rep:... 72 9e-12
UniRef50_Q1VLN9 Cluster: Cytidine deaminase; n=2; Bacteria|Rep: ... 71 2e-11
UniRef50_Q9RSE7 Cluster: Cytidine deaminase; n=2; Deinococcus|Re... 70 4e-11
UniRef50_Q5NP72 Cluster: Cytidine deaminase; n=6; Sphingomonadal... 69 6e-11
UniRef50_A3XR06 Cluster: Cytidine deaminase; n=3; Flavobacteriac... 69 8e-11
UniRef50_Q1BCP1 Cluster: Cytidine deaminase, homotetrameric; n=5... 69 1e-10
UniRef50_UPI00005104F3 Cluster: COG0295: Cytidine deaminase; n=1... 67 3e-10
UniRef50_Q7U596 Cluster: Putative cytidine/deoxycytidine deamina... 67 3e-10
UniRef50_Q6FSS3 Cluster: Similar to sp|Q06549 Saccharomyces cere... 66 8e-10
UniRef50_A6EPV3 Cluster: Cytidine deaminase; n=1; unidentified e... 65 1e-09
UniRef50_A1SYK7 Cluster: CMP/dCMP deaminase, zinc-binding; n=2; ... 65 1e-09
UniRef50_Q1QZC4 Cluster: Cytidine deaminase, homotetrameric; n=1... 65 1e-09
UniRef50_O51563 Cluster: Cytidine deaminase; n=3; Borrelia burgd... 64 2e-09
UniRef50_Q4PD94 Cluster: Putative uncharacterized protein; n=1; ... 63 4e-09
UniRef50_Q7MXW9 Cluster: Cytidine deaminase; n=1; Porphyromonas ... 62 7e-09
UniRef50_Q6KHU5 Cluster: Cytidine deaminase; n=1; Mycoplasma mob... 62 7e-09
UniRef50_Q311Y8 Cluster: Extracellular solute-binding protein, f... 62 1e-08
UniRef50_A7IEK0 Cluster: CMP/dCMP deaminase zinc-binding; n=1; X... 62 1e-08
UniRef50_UPI00006DC465 Cluster: hypothetical protein CdifQ_04000... 61 2e-08
UniRef50_Q0UVU3 Cluster: Putative uncharacterized protein; n=1; ... 61 2e-08
UniRef50_Q9A431 Cluster: Cytidine deaminase; n=2; Caulobacter|Re... 60 5e-08
UniRef50_Q64W81 Cluster: Cytidine deaminase; n=8; Bacteroidales|... 60 5e-08
UniRef50_Q3ERG8 Cluster: Cytidine deaminase; n=1; Bacillus thuri... 59 9e-08
UniRef50_Q98QI2 Cluster: CYTIDINE DEAMINASE; n=1; Mycoplasma pul... 58 2e-07
UniRef50_A3HXU1 Cluster: Putative cytidine deaminase; n=1; Algor... 57 3e-07
UniRef50_Q0C7E4 Cluster: Cytidine deaminase; n=1; Aspergillus te... 57 3e-07
UniRef50_Q2JF74 Cluster: CMP/dCMP deaminase, zinc-binding; n=35;... 57 4e-07
UniRef50_A4CJP7 Cluster: Cytidine deaminase; n=2; Flavobacterial... 56 6e-07
UniRef50_P75051 Cluster: Cytidine deaminase; n=3; Mycoplasma|Rep... 56 6e-07
UniRef50_Q4MV54 Cluster: Cytidine deaminase; n=1; Bacillus cereu... 52 8e-06
UniRef50_Q1E551 Cluster: Predicted protein; n=2; Eurotiomycetida... 52 8e-06
UniRef50_Q8S0I1 Cluster: Cytidine/deoxycytidine deaminase-like; ... 52 1e-05
UniRef50_Q8EDG1 Cluster: Cytidine deaminase; n=18; Shewanella|Re... 50 5e-05
UniRef50_Q81PF4 Cluster: Cytidine and deoxycytidylate deaminase ... 49 1e-04
UniRef50_A6EEW1 Cluster: Cytidine deaminase; n=1; Pedobacter sp.... 49 1e-04
UniRef50_Q3IBX5 Cluster: Cytidine deaminase; n=2; Alteromonadale... 47 4e-04
UniRef50_Q2S2Q4 Cluster: Cytidine and deoxycytidylate deaminase ... 46 9e-04
UniRef50_A5HYE6 Cluster: Cytidine deaminase; n=5; Firmicutes|Rep... 44 0.003
UniRef50_Q6GV32 Cluster: Small cytidine deaminase; n=2; Homo/Pan... 44 0.003
UniRef50_A5KJ88 Cluster: Putative uncharacterized protein; n=1; ... 43 0.005
UniRef50_Q7R4V1 Cluster: GLP_440_14428_13814; n=1; Giardia lambl... 43 0.005
UniRef50_Q6F0Z9 Cluster: Cytidine deaminase; n=1; Mesoplasma flo... 42 0.008
UniRef50_A6PPJ0 Cluster: CMP/dCMP deaminase, zinc-binding; n=1; ... 42 0.011
UniRef50_A6GC47 Cluster: Cytidine deaminase; n=1; Plesiocystis p... 42 0.015
UniRef50_O65571 Cluster: Cytidine deaminase; n=3; Arabidopsis th... 42 0.015
UniRef50_UPI0001554CC0 Cluster: PREDICTED: hypothetical protein;... 41 0.019
UniRef50_UPI0000499F7E Cluster: cytidine deaminase; n=1; Entamoe... 41 0.019
UniRef50_A6D7P0 Cluster: Putative uncharacterized protein; n=1; ... 41 0.019
UniRef50_A4RWY8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 41 0.019
UniRef50_Q1J4T0 Cluster: Cytidine deaminase; n=1; Streptococcus ... 41 0.025
UniRef50_Q4WAE7 Cluster: Cytidine deaminase, putative; n=2; cell... 41 0.025
UniRef50_P0C2P0 Cluster: Blasticidin-S deaminase; n=4; Trichocom... 41 0.025
UniRef50_Q2LPJ4 Cluster: Cytidine deaminase; n=1; Syntrophus aci... 40 0.044
UniRef50_A4C4L6 Cluster: Cytidine deaminase; n=1; Pseudoalteromo... 40 0.044
UniRef50_A1JTY3 Cluster: Cytidine deaminase; n=4; Yersinia|Rep: ... 40 0.044
UniRef50_Q8DA31 Cluster: Cytidine deaminase; n=44; Gammaproteoba... 40 0.044
UniRef50_Q0BSC1 Cluster: Blasticidin-S deaminase; n=1; Granuliba... 38 0.18
UniRef50_A5ERK0 Cluster: Cytidine deaminase family enzyme; n=7; ... 38 0.18
UniRef50_Q9XEX5 Cluster: Cytidine deaminase; n=5; Arabidopsis th... 38 0.18
UniRef50_Q9CP11 Cluster: Cytidine deaminase; n=6; Pasteurellacea... 37 0.31
UniRef50_P44325 Cluster: Cytidine deaminase; n=11; Haemophilus i... 37 0.31
UniRef50_P33967 Cluster: Blasticidin-S deaminase; n=1; Bacillus ... 37 0.31
UniRef50_Q97NG2 Cluster: Cytidine/deoxycytidylate deaminase fami... 37 0.41
UniRef50_Q6D3B4 Cluster: Cytidine deaminase; n=66; cellular orga... 36 0.72
UniRef50_Q9XHQ7 Cluster: Cytidine deaminase 9; n=5; Arabidopsis ... 36 0.96
UniRef50_UPI0000584B30 Cluster: PREDICTED: similar to cytidine d... 35 1.3
UniRef50_A6FJF8 Cluster: Cytidine deaminase; n=1; Moritella sp. ... 35 1.3
UniRef50_A7PE94 Cluster: Chromosome chr11 scaffold_13, whole gen... 35 1.3
UniRef50_A4TG49 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_A6AKL5 Cluster: Ggdef family protein; n=2; Vibrio harve... 34 2.2
UniRef50_Q2SSF1 Cluster: Riboflavin kinase (Flavokinase) domain ... 34 2.9
UniRef50_Q4AGH7 Cluster: Cytidine deaminase; n=1; Chlorobium pha... 33 5.1
UniRef50_UPI0000F2098E Cluster: PREDICTED: hypothetical protein;... 32 8.9
UniRef50_Q5WLB7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q5AQP1 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_Q7VMJ6 Cluster: Cytidine deaminase; n=2; Pasteurellacea... 32 8.9
>UniRef50_Q2F6C1 Cluster: Cytidine deaminase; n=1; Bombyx mori|Rep:
Cytidine deaminase - Bombyx mori (Silk moth)
Length = 186
Score = 306 bits (751), Expect = 3e-82
Identities = 144/144 (100%), Positives = 144/144 (100%)
Frame = +2
Query: 2 FNSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCA 181
FNSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCA
Sbjct: 43 FNSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCA 102
Query: 182 ERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDT 361
ERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDT
Sbjct: 103 ERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDT 162
Query: 362 VLCTKLSHLLPLSFVSFKKDSVIT 433
VLCTKLSHLLPLSFVSFKKDSVIT
Sbjct: 163 VLCTKLSHLLPLSFVSFKKDSVIT 186
>UniRef50_Q0IF52 Cluster: Cytidine deaminase, putative; n=1; Aedes
aegypti|Rep: Cytidine deaminase, putative - Aedes
aegypti (Yellowfever mosquito)
Length = 155
Score = 149 bits (361), Expect = 5e-35
Identities = 66/135 (48%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
Frame = +2
Query: 2 FNSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCA 181
F++LD VQ L+ A+K+R AYCPYSNF+VGAA+ T+ + GCN+EN T PS+CA
Sbjct: 17 FSTLDAKVQELINAAIKVRNNAYCPYSNFAVGAALRTKT-GEIITGCNVENGTFAPSVCA 75
Query: 182 ERSAVAKAVCDGYTKFKCVAIVAHQR-EFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMD 358
ER+A+ KA+ +G+ +F+ +A+VA+Q EFT+PCG CRQTL+EFC+ ++ +YL++P+
Sbjct: 76 ERNAICKAISEGFREFESLAVVAYQETEFTSPCGTCRQTLSEFCNK--NMPVYLAKPSPA 133
Query: 359 TVLCTKLSHLLPLSF 403
V+ T + LLP +F
Sbjct: 134 RVMLTSIDKLLPHAF 148
>UniRef50_UPI0000D56D92 Cluster: PREDICTED: similar to CG8360-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8360-PA - Tribolium castaneum
Length = 150
Score = 126 bits (303), Expect = 5e-28
Identities = 62/137 (45%), Positives = 88/137 (64%), Gaps = 1/137 (0%)
Frame = +2
Query: 2 FNSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCA 181
F SLD Q LL +A R AYCPYS F VGAA+ T + ++ GCNIENS T +CA
Sbjct: 14 FASLDSETQALLRQATASRLFAYCPYSKFQVGAAVATTTGA-IFGGCNIENSAYTVGICA 72
Query: 182 ERSAVAKAVCDGYTKFKCVAIVAHQRE-FTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMD 358
ER+A+AKA+ +G+ FK VA++ +Q +T PCG CRQ ++E+ G+++I++S+ ++
Sbjct: 73 ERTALAKAISEGFQSFKAVAVIGNQENVYTTPCGACRQFMSEY----GNMKIFISKSDLE 128
Query: 359 TVLCTKLSHLLPLSFVS 409
V T L LLP F S
Sbjct: 129 HVFVTDLGQLLPHQFQS 145
>UniRef50_Q892S1 Cluster: Cytidine deaminase; n=9;
Clostridiales|Rep: Cytidine deaminase - Clostridium
tetani
Length = 141
Score = 115 bits (277), Expect = 7e-25
Identities = 60/132 (45%), Positives = 87/132 (65%)
Frame = +2
Query: 26 QNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKA 205
+ L+ +A++ R+ AY PYSNF VGAAILTE D+ +Y GCNIEN++ + CAER+A+ KA
Sbjct: 13 KELIKKAMEARELAYVPYSNFKVGAAILTE-DNNIYNGCNIENASFGATNCAERTAIFKA 71
Query: 206 VCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSH 385
+ +G TK K +AI+ + EFT PCG+CRQ + EF D + + L++ +D L
Sbjct: 72 ISEGKTKIKAIAILGRKDEFTYPCGICRQVIAEF--GDKNTIVILAK-NIDEYEVKTLEE 128
Query: 386 LLPLSFVSFKKD 421
+LP +F KKD
Sbjct: 129 ILPGAFT--KKD 138
>UniRef50_P32320 Cluster: Cytidine deaminase; n=36; cellular
organisms|Rep: Cytidine deaminase - Homo sapiens (Human)
Length = 146
Score = 115 bits (276), Expect = 1e-24
Identities = 58/130 (44%), Positives = 86/130 (66%), Gaps = 1/130 (0%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
E VQ LL+ + + +K AYCPYS+F VGAA+LT+E R++ GCNIEN+ +CAER+A+
Sbjct: 13 ECVQQLLVCSQEAKKSAYCPYSHFPVGAALLTQE-GRIFKGCNIENACYPLGICAERTAI 71
Query: 197 AKAVCDGYTKFKCVAIVAH-QREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCT 373
KAV +GY F+ +AI + Q +F +PCG CRQ + EF + + +Y+++P T +
Sbjct: 72 QKAVSEGYKDFRAIAIASDMQDDFISPCGACRQVMREFGT---NWPVYMTKPD-GTYIVM 127
Query: 374 KLSHLLPLSF 403
+ LLP SF
Sbjct: 128 TVQELLPSSF 137
>UniRef50_A0CU43 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 144
Score = 114 bits (275), Expect = 1e-24
Identities = 58/149 (38%), Positives = 93/149 (62%)
Frame = +2
Query: 11 LDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERS 190
++ T + L+ EAVK ++RAYCPYSNF VG ++LT+ ++++Y GCN+EN++ +CAER
Sbjct: 1 MEITEEQLIQEAVKAKERAYCPYSNFRVGCSLLTK-NNKLYTGCNVENASYGLCVCAERV 59
Query: 191 AVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLC 370
A+ KAV +G + + + + E T PCG+CRQT+ EFC DI+I
Sbjct: 60 AICKAVSEGDRQISTIVVSSDTDEPTFPCGMCRQTIIEFCYPGNDIKIIAIGKDHTKPKY 119
Query: 371 TKLSHLLPLSFVSFKKDSVITVKTELKKK 457
+K + ++P +FV KD + V +L++K
Sbjct: 120 SKGTEVIPFAFV--PKD--LNVDPQLEQK 144
>UniRef50_Q97IU6 Cluster: Cytidine deaminase, cdd; n=10;
Clostridia|Rep: Cytidine deaminase, cdd - Clostridium
acetobutylicum
Length = 132
Score = 113 bits (272), Expect = 3e-24
Identities = 53/124 (42%), Positives = 86/124 (69%)
Frame = +2
Query: 32 LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
L+ +A++ RK+AY PYS F VGAA++ + + +Y GCNIEN++ + CAER+A+ KAV
Sbjct: 6 LVYKALEARKKAYAPYSKFKVGAAVIAD-NGEIYTGCNIENASYGATNCAERTAIFKAVS 64
Query: 212 DGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLL 391
+G+TK +AIV ++++T PCG+CRQ + EF S D++I L + + + ++ T L +L
Sbjct: 65 EGHTKLNAIAIVGVEKDYTYPCGICRQVIAEFASE--DMKIVLGKNSGEYIVKT-LEEIL 121
Query: 392 PLSF 403
P +F
Sbjct: 122 PGAF 125
>UniRef50_Q20628 Cluster: Cytidine deaminase protein 2; n=5;
Chromadorea|Rep: Cytidine deaminase protein 2 -
Caenorhabditis elegans
Length = 166
Score = 113 bits (272), Expect = 3e-24
Identities = 62/159 (38%), Positives = 90/159 (56%), Gaps = 2/159 (1%)
Frame = +2
Query: 5 NSLDETVQN--LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMC 178
NSL + + + L+ A KRA+CPYS F VGAA+LTE + GCN+EN++ ++C
Sbjct: 4 NSLPQDISDVELVHLARAAMKRAHCPYSKFPVGAALLTES-GEIVQGCNVENASYGGTIC 62
Query: 179 AERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMD 358
AERSA+ AV GYTKF+ +A+V E +PCG+CRQ L EF GD ++ + + +
Sbjct: 63 AERSAIVSAVSQGYTKFRAIAVVTELSEPASPCGLCRQFLVEF----GDYKVVVGTASNN 118
Query: 359 TVLCTKLSHLLPLSFVSFKKDSVITVKTELKKKNNESDS 475
+L T LLP +F D+ K K + D+
Sbjct: 119 KILITSTRALLPFAFTPESLDTFEQEKASEAKGLKQDDA 157
>UniRef50_Q9S3M0 Cluster: Cytidine deaminase; n=4; cellular
organisms|Rep: Cytidine deaminase - Bacillus
psychrophilus (Sporosarcina psychrophila)
Length = 136
Score = 112 bits (269), Expect = 7e-24
Identities = 59/127 (46%), Positives = 81/127 (63%)
Frame = +2
Query: 23 VQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAK 202
V+ L+ E+ K R++AY PYS F VGAA+L E D +Y GCNIENS + + CAER+A K
Sbjct: 3 VEKLIAESKKAREQAYVPYSKFPVGAALLAE-DGTIYHGCNIENSAYSMTNCAERTAFFK 61
Query: 203 AVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLS 382
AV DG FK +A+VA +PCG CRQ + EFC +G + +YL+ D + T ++
Sbjct: 62 AVSDGVRSFKALAVVADTEGPVSPCGACRQVIAEFC--NGSMPVYLTNLKGD-IEETTVA 118
Query: 383 HLLPLSF 403
LLP +F
Sbjct: 119 KLLPGAF 125
>UniRef50_A4XLW2 Cluster: Cytidine deaminase; n=2; Bacteria|Rep:
Cytidine deaminase - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 135
Score = 111 bits (268), Expect = 9e-24
Identities = 55/131 (41%), Positives = 81/131 (61%)
Frame = +2
Query: 11 LDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERS 190
+D T++++L A + + RAY PYSNF VGAA+LT+ +MY GCNIEN++ + ++CAER
Sbjct: 7 IDNTLKSILNLAKEQQSRAYAPYSNFKVGAAVLTQS-GKMYLGCNIENASYSLTICAERV 65
Query: 191 AVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLC 370
A+ KA+ +G+ K + ++ Q E +PCG CRQ + E D IYLS M ++
Sbjct: 66 ALFKAISEGHKDIKTIFVIGPQNEPISPCGACRQVMLELAK---DATIYLSNYDMTKIIE 122
Query: 371 TKLSHLLPLSF 403
T LLP F
Sbjct: 123 TYAKELLPYGF 133
>UniRef50_Q8T8Y3 Cluster: AT17318p; n=5; Sophophora|Rep: AT17318p -
Drosophila melanogaster (Fruit fly)
Length = 286
Score = 109 bits (261), Expect = 6e-23
Identities = 67/152 (44%), Positives = 85/152 (55%), Gaps = 14/152 (9%)
Frame = +2
Query: 2 FNSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCA 181
F ++ E + LL A+ R+ AY PYS F VGAA + R+YAGCNIEN TP CA
Sbjct: 138 FCAVGEDGRELLEAALSARRCAYAPYSKFKVGAAFRAK-CGRIYAGCNIENVAFTPGNCA 196
Query: 182 ERSAVAKAVCDGYTKFKCVAIVA-HQREFTAPCGVCRQTLNEFCSSDGDIEIYLSR---- 346
ER A+AK + +G K+ A+VA H FT PCGVCRQ + EF + DI IY+++
Sbjct: 197 ERCALAKGISEGEKKYTAGAVVAYHPDGFTTPCGVCRQFILEFIQN--DIPIYIAKAPPP 254
Query: 347 ---------PTMDTVLCTKLSHLLPLSFVSFK 415
P VL T HLLP SF SF+
Sbjct: 255 EQENCIPSIPDEAEVLVTSAYHLLPHSFNSFE 286
>UniRef50_UPI00015B5AD1 Cluster: PREDICTED: similar to GA21017-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA21017-PA - Nasonia vitripennis
Length = 532
Score = 108 bits (260), Expect = 8e-23
Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 2/145 (1%)
Frame = +2
Query: 5 NSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAE 184
+ L+ + Q L+ E ++ R +Y PYS F+VG+A+ + S + GCN+EN++ + S+CAE
Sbjct: 389 SDLNASAQQLIREGLQARTFSYSPYSKFAVGSALRCADGS-IRTGCNVENASFSASICAE 447
Query: 185 RSAVAKAVCDGYTKFKCVAIVAHQRE--FTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMD 358
R A+ KA+ +G F +++VA+ + T PCGVCRQ L EF GD +Y++ P M
Sbjct: 448 RCALTKAISEGQQDFHSISVVANSIDGRLTTPCGVCRQMLCEF----GDFPVYVTDPGMK 503
Query: 359 TVLCTKLSHLLPLSFVSFKKDSVIT 433
VL T LLP +F K++ I+
Sbjct: 504 DVLVTTTHELLPYAFRKGSKNNFIS 528
>UniRef50_P19079 Cluster: Cytidine deaminase; n=51; Bacteria|Rep:
Cytidine deaminase - Bacillus subtilis
Length = 136
Score = 105 bits (252), Expect = 8e-22
Identities = 48/98 (48%), Positives = 67/98 (68%)
Frame = +2
Query: 26 QNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKA 205
Q L+ EA+K R AY PYS F VGAA+LT+ D ++Y GCNIEN+ + CAER+A+ KA
Sbjct: 4 QELITEALKARDMAYAPYSKFQVGAALLTK-DGKVYRGCNIENAAYSMCNCAERTALFKA 62
Query: 206 VCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSD 319
V +G T+F+ +A+ A +PCG CRQ ++E C+ D
Sbjct: 63 VSEGDTEFQMLAVAADTPGPVSPCGACRQVISELCTKD 100
>UniRef50_Q5U3F7 Cluster: Zgc:103586; n=3; cellular organisms|Rep:
Zgc:103586 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 133
Score = 104 bits (250), Expect = 1e-21
Identities = 53/128 (41%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
Frame = +2
Query: 23 VQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAK 202
V L+ + ++ R+ AYCPYS F VGAAILT + + GCN+EN++ ++CAER+A+ +
Sbjct: 3 VAELVAKCLQAREMAYCPYSGFPVGAAILTTGGA-IVTGCNVENASYGLTVCAERTAIQR 61
Query: 203 AVCDGYTKFKCVAIVAHQRE-FTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKL 379
AV +GY +F +A+ ++ F PCG CRQ L EF + + ++YL++P + T L
Sbjct: 62 AVAEGYRRFTAIAVTCDIKDSFVGPCGACRQVLMEFGT---EWDVYLTKPD-GSYRKTSL 117
Query: 380 SHLLPLSF 403
LLPL+F
Sbjct: 118 RDLLPLAF 125
>UniRef50_Q5KX12 Cluster: Cytidine deaminase; n=6; Firmicutes|Rep:
Cytidine deaminase - Geobacillus kaustophilus
Length = 140
Score = 103 bits (247), Expect = 3e-21
Identities = 54/127 (42%), Positives = 79/127 (62%)
Frame = +2
Query: 23 VQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAK 202
++ L++EA K R+ AY PYS F VGAA+LT+ S +Y GCNIEN+ + CAER+A+ K
Sbjct: 11 IEQLIVEAKKARELAYVPYSKFPVGAALLTKGGS-VYRGCNIENAAYSVCNCAERTALFK 69
Query: 203 AVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLS 382
A +G +F +A++A PCG CRQ + E C GD+++ L+ D + T +S
Sbjct: 70 AYSEGEKEFTALAVIADTPRPVPPCGACRQVIAELC--HGDMKVILANLKGDVKVMT-VS 126
Query: 383 HLLPLSF 403
LLP +F
Sbjct: 127 ELLPEAF 133
>UniRef50_Q22922 Cluster: Cytidine deaminase protein 1; n=1;
Caenorhabditis elegans|Rep: Cytidine deaminase protein 1
- Caenorhabditis elegans
Length = 158
Score = 103 bits (246), Expect = 4e-21
Identities = 57/156 (36%), Positives = 87/156 (55%)
Frame = +2
Query: 8 SLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAER 187
+L E Q L+ +A+ + AYC YSNF VGAA++ + D + G N EN++ ++CAER
Sbjct: 7 NLTEFEQQLVDKAIGAMENAYCKYSNFKVGAALVCD-DGEIIIGANHENASYGATICAER 65
Query: 188 SAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVL 367
SA+ A+ G+ KFK + + +PCGVCRQ L EF GD ++ L T D ++
Sbjct: 66 SAIVTALTKGHRKFKYIVVATELEAPCSPCGVCRQVLIEF----GDYKVILGSSTSDQII 121
Query: 368 CTKLSHLLPLSFVSFKKDSVITVKTELKKKNNESDS 475
T LLP +F D +TE +K +N+ ++
Sbjct: 122 ETTTYELLPYAFTPKSLDD-HEKETEERKHHNDHNN 156
>UniRef50_A7SFK0 Cluster: Predicted protein; n=3; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 148
Score = 102 bits (245), Expect = 6e-21
Identities = 50/127 (39%), Positives = 79/127 (62%)
Frame = +2
Query: 23 VQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAK 202
+Q+L+ + K ++ +Y PYS F VG+A+LT D+R++ GCN+EN++ +CAER+A+ K
Sbjct: 17 IQDLIKQCFKAKEFSYSPYSKFRVGSAVLTN-DNRIFTGCNVENASYGIGICAERTALVK 75
Query: 203 AVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLS 382
AV +G+ FK +A+ +T PCG CRQ + EF DIE+Y+ T + +
Sbjct: 76 AVSEGFRGFKAIAVCTDVAAYTGPCGACRQFIAEF---GLDIEVYMC-STDHSYQLLLIK 131
Query: 383 HLLPLSF 403
LLP +F
Sbjct: 132 DLLPRAF 138
>UniRef50_Q04D97 Cluster: Cytidine deaminase; n=3;
Lactobacillales|Rep: Cytidine deaminase - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 132
Score = 101 bits (243), Expect = 1e-20
Identities = 54/118 (45%), Positives = 73/118 (61%)
Frame = +2
Query: 62 RAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVA 241
+AY PYS+F+VGAA+L+ +D R++ GCNIEN+ +MCAER+A+ AV G +FK +
Sbjct: 19 KAYIPYSHFAVGAALLSADD-RIFPGCNIENAAFGSTMCAERTAIFSAVAAGCHQFKALV 77
Query: 242 IVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLPLSFVSFK 415
I APCG CRQ + E+ D + IYL+ T V+ T L HLLP SF K
Sbjct: 78 ISGRTEGAIAPCGACRQVMVEW--FDKKMPIYLTN-TSGKVVKTDLDHLLPASFEDLK 132
>UniRef50_Q73LD4 Cluster: Cytidine deaminase; n=14; Bacteria|Rep:
Cytidine deaminase - Treponema denticola
Length = 136
Score = 99 bits (238), Expect = 4e-20
Identities = 53/129 (41%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
Frame = +2
Query: 11 LDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERS 190
+ ++NL A++ K+AY PYSNF VGAAIL E+ S + G NIEN + + CAER+
Sbjct: 3 ISSQLENLFKTALEAAKKAYAPYSNFHVGAAILLEDGS-IVTGVNIENRSYGLTNCAERT 61
Query: 191 AVAKAVCDGYTKFKCVAIVAHQREF-TAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVL 367
A+ KAV +G T FK +AI ++ +PCG CRQ ++EF D + I+ S ++D V+
Sbjct: 62 AIFKAVSEGKTDFKAIAIATPDADYPVSPCGACRQVISEFMGGDTPV-IFGS--SLDNVV 118
Query: 368 CTKLSHLLP 394
T + + P
Sbjct: 119 LTDVKGIYP 127
>UniRef50_Q9WZV0 Cluster: Cytidine/deoxycytidine deaminase; n=3;
Bacteria|Rep: Cytidine/deoxycytidine deaminase -
Thermotoga maritima
Length = 132
Score = 97.1 bits (231), Expect = 3e-19
Identities = 56/126 (44%), Positives = 77/126 (61%)
Frame = +2
Query: 26 QNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKA 205
+ L+ A++ RK+AY YS F VGAA+LT+ ++Y G N+ENS+ ++CAER AV KA
Sbjct: 5 EKLVKMALEARKKAYAKYSGFRVGAALLTKS-GKIYTGVNVENSSYGLTVCAERVAVFKA 63
Query: 206 VCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSH 385
V +G +F +AI + + TAPCG CRQ L EF S D D+ I R ++ KL
Sbjct: 64 VSEGEREFVAIAIASDSPDKTAPCGACRQVLYEF-SDDLDV-IMADRDGNFEIV--KLKD 119
Query: 386 LLPLSF 403
LLP F
Sbjct: 120 LLPRGF 125
>UniRef50_Q9YD74 Cluster: Cytidine deaminase; n=1; Aeropyrum
pernix|Rep: Cytidine deaminase - Aeropyrum pernix
Length = 136
Score = 97.1 bits (231), Expect = 3e-19
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 1/127 (0%)
Frame = +2
Query: 26 QNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKA 205
++L+ AV+ RAY PYS F VGAA+ T D R+Y GCN+ENS+ ++CAER+AV KA
Sbjct: 7 EDLVGAAVEQAGRAYAPYSRFRVGAAVRTS-DGRVYGGCNVENSSYGLTVCAERTAVFKA 65
Query: 206 VCDGYTKFKCVAI-VAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLS 382
V +G VA+ A E PCG C Q L+EF + GD +Y+ T + +LS
Sbjct: 66 VSEGSRGVVEVAVYAADSDEPVPPCGACLQVLSEF--ARGDPRVYMISRT-GRIRVARLS 122
Query: 383 HLLPLSF 403
LLP++F
Sbjct: 123 QLLPMAF 129
>UniRef50_Q9CFM8 Cluster: Cytidine deaminase; n=4;
Lactobacillales|Rep: Cytidine deaminase - Lactococcus
lactis subsp. lactis (Streptococcus lactis)
Length = 130
Score = 95.9 bits (228), Expect = 6e-19
Identities = 51/128 (39%), Positives = 72/128 (56%)
Frame = +2
Query: 20 TVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVA 199
T + ++ A + AY PYS+F VGAA T D R+ GCNIEN++ S CAER+A+
Sbjct: 3 TTKKMIAAAREAASLAYVPYSHFPVGAAFHTT-DGRIITGCNIENASFGLSNCAERTAIF 61
Query: 200 KAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKL 379
KA+ +G F + + E +PCG CRQ + EFC + D+ ++L D V T +
Sbjct: 62 KAISEGLKDFDALYVFGETEEPISPCGACRQVIAEFCPA--DMPVFLISKN-DNVKETSV 118
Query: 380 SHLLPLSF 403
LLP SF
Sbjct: 119 EELLPYSF 126
>UniRef50_A0IPH3 Cluster: Cytidine deaminase; n=1; Serratia
proteamaculans 568|Rep: Cytidine deaminase - Serratia
proteamaculans 568
Length = 142
Score = 95.1 bits (226), Expect = 1e-18
Identities = 48/134 (35%), Positives = 81/134 (60%), Gaps = 7/134 (5%)
Frame = +2
Query: 23 VQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAK 202
+Q ++ A + R+ +Y PYSNF+VGAA++T+ +++ GCN+E+ + +P+ CAER A+ K
Sbjct: 7 IQEMIAAASQAREFSYAPYSNFTVGAALITKS-GKVFTGCNVESVSYSPTTCAERVAILK 65
Query: 203 AVCDGYTKFKCVAIVAHQR-------EFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDT 361
AV +G F+ + ++ R ++ PCGVCRQ + EF DI+I ++ ++D
Sbjct: 66 AVSEGERSFEMIVVIGGPRVGESKAKGYSGPCGVCRQMIYEF---GKDIQIIIAN-SLDE 121
Query: 362 VLCTKLSHLLPLSF 403
+S L PL F
Sbjct: 122 YYVHDISELFPLGF 135
>UniRef50_Q18YY0 Cluster: Cytidine deaminase; n=2;
Desulfitobacterium hafniense|Rep: Cytidine deaminase -
Desulfitobacterium hafniense (strain DCB-2)
Length = 139
Score = 94.3 bits (224), Expect = 2e-18
Identities = 54/129 (41%), Positives = 73/129 (56%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
E ++ L+ A K + AY PYSN+ VGAA L E R+ AGCN+EN++ ++CAER+AV
Sbjct: 10 ELIEELIRRAQKAYQSAYVPYSNYPVGAATLWES-GRIIAGCNVENASYGLTICAERNAV 68
Query: 197 AKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTK 376
+ G + K VA+ F +PCG CRQ L EF D + L T + T+
Sbjct: 69 FHSAYHGERRLKAVAVAVPTDAFPSPCGACRQVLREFSQ---DCLVILVNGKGQTKM-TR 124
Query: 377 LSHLLPLSF 403
LS LLP SF
Sbjct: 125 LSVLLPDSF 133
>UniRef50_Q098R8 Cluster: Cytidine deaminase; n=2;
Cystobacterineae|Rep: Cytidine deaminase - Stigmatella
aurantiaca DW4/3-1
Length = 134
Score = 93.9 bits (223), Expect = 3e-18
Identities = 53/124 (42%), Positives = 69/124 (55%)
Frame = +2
Query: 32 LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
L +A K+R+RA+ PYS F VGAAIL E+ S + GCN+EN+T ++CAER A AV
Sbjct: 10 LFQQAAKVRERAHVPYSRFPVGAAILFEDGS-VVTGCNVENATYGLTVCAERGAFVSAVA 68
Query: 212 DGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLL 391
G+++ VAIV PCG+CRQ + EF D I SR L LL
Sbjct: 69 QGHSRPVAVAIVVDTPTPCPPCGMCRQVMAEFAGPDLPIR---SRTLQGEEARYALRELL 125
Query: 392 PLSF 403
P +F
Sbjct: 126 PYAF 129
>UniRef50_Q7R4V0 Cluster: GLP_440_14085_14489; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_440_14085_14489 - Giardia lamblia
ATCC 50803
Length = 134
Score = 93.9 bits (223), Expect = 3e-18
Identities = 50/124 (40%), Positives = 74/124 (59%)
Frame = +2
Query: 32 LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
L+ A++ + AY PYS + VGAAILTE ++ GCN+EN+ +CAER+AV KA+
Sbjct: 11 LIKAAIEGSEHAYIPYSKYKVGAAILTES-GEIFKGCNVENAAYPIGVCAERTAVVKAIS 69
Query: 212 DGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLL 391
+G A+V R+ +PCG+CRQTLNEF + + + L++ + + L LL
Sbjct: 70 EGKKDMVACAVVT--RDGGSPCGMCRQTLNEF---NPKMHMILAKLDGEVITEMPLDELL 124
Query: 392 PLSF 403
PL F
Sbjct: 125 PLGF 128
>UniRef50_Q5ZVK5 Cluster: Cytidine deaminase; n=4; Legionella
pneumophila|Rep: Cytidine deaminase - Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ATCC 33152 / DSM 7513)
Length = 131
Score = 92.7 bits (220), Expect = 6e-18
Identities = 47/131 (35%), Positives = 73/131 (55%)
Frame = +2
Query: 11 LDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERS 190
+D+ N++ EA K+ AY PYS FSV A I T++++ Y G N+EN + + CAE S
Sbjct: 1 MDKLTSNMINEAHKVLVNAYAPYSKFSVAACICTDKNN-FYTGVNVENISYGLTTCAEVS 59
Query: 191 AVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLC 370
A+ V G K K + ++A +PCG CRQ ++EF SSD + + ++
Sbjct: 60 AICNMVTAGERKIKSIVVLAANNLLCSPCGACRQRIHEFSSSDTMVHLCNKETIFHSI-- 117
Query: 371 TKLSHLLPLSF 403
++ LLPL+F
Sbjct: 118 -TINELLPLAF 127
>UniRef50_A5M7S1 Cluster: Cytidine deaminase; n=4; Streptococcus
pneumoniae|Rep: Cytidine deaminase - Streptococcus
pneumoniae SP14-BS69
Length = 135
Score = 92.7 bits (220), Expect = 6e-18
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 2/130 (1%)
Frame = +2
Query: 32 LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
L+ +A K+ K AYCPYS F VGAAIL +D ++ G NIEN + + CAERSA+
Sbjct: 9 LMEQAKKVLKNAYCPYSKFPVGAAILF-KDGKVITGANIENVSFGVTNCAERSAIFYGAS 67
Query: 212 DGYTK--FKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSH 385
GY K +A+ ++ PC +CRQ + EFC D + + + +L +L
Sbjct: 68 QGYRKGDILAIAVAGETEDYLPPCNICRQVMVEFCEPDTLVFLLNGK---GNILELRLEE 124
Query: 386 LLPLSFVSFK 415
L+P SF S +
Sbjct: 125 LVPYSFSSLE 134
>UniRef50_Q9KD53 Cluster: Cytidine deaminase; n=39; Bacteria|Rep:
Cytidine deaminase - Bacillus halodurans
Length = 132
Score = 91.5 bits (217), Expect = 1e-17
Identities = 51/128 (39%), Positives = 75/128 (58%)
Frame = +2
Query: 26 QNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKA 205
Q L+ EA++ R+ AY PYS F VGAA+L ++ S + G NIEN++ + CAER+A+ KA
Sbjct: 4 QMLIKEAIQAREGAYVPYSRFQVGAALLMKDGS-VIRGANIENASYGLTNCAERTALFKA 62
Query: 206 VCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSH 385
+G +A+VA + PCG CRQ + E C + D ++YL D T +S
Sbjct: 63 YSEGRRDVVAIAVVADTKRPVPPCGACRQVMAELCPA--DTKVYLGNLQGDIQEIT-VSE 119
Query: 386 LLPLSFVS 409
LLP +F +
Sbjct: 120 LLPGAFTA 127
>UniRef50_A7H832 Cluster: Cytidine deaminase; n=8; cellular
organisms|Rep: Cytidine deaminase - Anaeromyxobacter sp.
Fw109-5
Length = 138
Score = 90.6 bits (215), Expect = 2e-17
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 1/117 (0%)
Frame = +2
Query: 56 RKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKC 235
RKRAY PYS F VGAA+ +++GCNIEN++ ++CAER AVA AV G + +
Sbjct: 23 RKRAYAPYSRFRVGAAV--RAGGAVHSGCNIENASYGLTVCAERVAVAAAVAAGARRIEA 80
Query: 236 VAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSR-PTMDTVLCTKLSHLLPLSF 403
VA+ + E T PCG+C QTL EF + + + +R T+DT L LLP +F
Sbjct: 81 VAVASGTDEPTPPCGMCLQTLAEFAGPELPVRLVGARGGTLDTT----LGELLPRAF 133
>UniRef50_Q49Y11 Cluster: Cytidine deaminase; n=16;
Staphylococcus|Rep: Cytidine deaminase - Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305
/DSM 20229)
Length = 141
Score = 89.8 bits (213), Expect = 4e-17
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 2/123 (1%)
Frame = +2
Query: 41 EAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGY 220
E K + AY PYSNF VGA + T+ D + Y G N+EN+ ++CAERS++ A+ DGY
Sbjct: 17 EVRKAQANAYAPYSNFKVGAYLRTK-DGKAYYGGNVENAAYPMAICAERSSLVAAIADGY 75
Query: 221 T--KFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLP 394
F+ + + E ++PCG CRQ + E C D ++ +Y++ D + + LLP
Sbjct: 76 RPGDFESITVTVDADEPSSPCGACRQVMKELC--DDEMPVYMTNHKGDMTELS-VGELLP 132
Query: 395 LSF 403
L F
Sbjct: 133 LGF 135
>UniRef50_A6VSZ1 Cluster: Cytidine deaminase; n=2;
Proteobacteria|Rep: Cytidine deaminase - Marinomonas sp.
MWYL1
Length = 139
Score = 89.8 bits (213), Expect = 4e-17
Identities = 50/129 (38%), Positives = 66/129 (51%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
E L A + +AY PYS F VGAAILT R+Y+GCN+EN+ CAE A+
Sbjct: 5 EQSAELFALAKEAMNKAYVPYSRFHVGAAILTA-GGRIYSGCNVENAAFPEGTCAEAGAI 63
Query: 197 AKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTK 376
A V G T K + ++ E PCG CRQ + EF S D I I + ++
Sbjct: 64 ASMVLGGDTLIKDIFVIGKGEELVTPCGGCRQKIREFSSVDTMIHICGAEGVRKSL---T 120
Query: 377 LSHLLPLSF 403
++ LLP SF
Sbjct: 121 MNELLPFSF 129
>UniRef50_A3GEY6 Cluster: Predicted protein; n=2;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 151
Score = 89.4 bits (212), Expect = 6e-17
Identities = 48/129 (37%), Positives = 75/129 (58%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
E L + ++ R +Y PYS F VG ++TE + +G NIEN++ +CAER+A+
Sbjct: 16 EEFATLKQKVLEARDLSYSPYSKFRVGCTLITES-GQYVSGANIENASYGACICAERTAI 74
Query: 197 AKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTK 376
+KA+ +G KFK +AI + +E +PCG+CRQ + EF ++ IY+ + +
Sbjct: 75 SKALLEGNRKFKVIAISSDSKEPISPCGICRQFIREF---GPNVPIYMFGAD-GSFIKVF 130
Query: 377 LSHLLPLSF 403
L LLPLSF
Sbjct: 131 LQDLLPLSF 139
>UniRef50_A2QHH3 Cluster: Catalytic activity: Cytidine + H(2)O <=>
uridine + NH; n=8; Fungi/Metazoa group|Rep: Catalytic
activity: Cytidine + H(2)O <=> uridine + NH -
Aspergillus niger
Length = 142
Score = 89.4 bits (212), Expect = 6e-17
Identities = 46/129 (35%), Positives = 68/129 (52%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
+ ++ L +A+ + AYCPYS F VGA ILTE G N+EN++ CAER A
Sbjct: 11 QELETLSTKAIAAKDTAYCPYSKFRVGACILTES-GEFVQGANVENASYPVGTCAERVAF 69
Query: 197 AKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTK 376
A+ G+ FK +A+ + +PCG+CRQ ++EF + + I +Y T
Sbjct: 70 GSAIVAGHRNFKAIAVATDIKPPASPCGMCRQFMSEFTTPEFPIFMYDGE---GNYTLTT 126
Query: 377 LSHLLPLSF 403
+ LLP SF
Sbjct: 127 MGELLPSSF 135
>UniRef50_Q6CQB3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetaceae|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 147
Score = 89.0 bits (211), Expect = 7e-17
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Frame = +2
Query: 23 VQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAK 202
V ++E+ K + +Y PYS F VG ILT+ D G N+EN+T ++CAER+A+ K
Sbjct: 15 VDRAILESQKAKSGSYSPYSKFRVGCCILTK-DGTYITGSNVENATYGATICAERAAIVK 73
Query: 203 AVCDGY-TKFKCVAIVAHQRE-FTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTK 376
AV + + CVAI + R+ + PCG+CRQT+ EF D+ I ++
Sbjct: 74 AVTSSHRADWVCVAINSDMRDNYIPPCGICRQTIREF--GKEDLPIIMTNCDTSVKKIMT 131
Query: 377 LSHLLPLSF 403
L+ LLP SF
Sbjct: 132 LNELLPESF 140
>UniRef50_Q9HR24 Cluster: Cytidine aminohydrolase; n=5;
Halobacteriaceae|Rep: Cytidine aminohydrolase -
Halobacterium salinarium (Halobacterium halobium)
Length = 134
Score = 88.6 bits (210), Expect = 1e-16
Identities = 53/132 (40%), Positives = 72/132 (54%)
Frame = +2
Query: 29 NLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAV 208
+LL A A+ PYS + VGAA+ T + +Y GCNIEN+ + S+ AE AV KAV
Sbjct: 5 DLLAAARDATAAAHVPYSEYKVGAALDTASGA-VYTGCNIENANYSNSLHAEEVAVGKAV 63
Query: 209 CDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHL 388
G T F+ +A+ + QR+ PCG+CRQTL EF + D I T V T L L
Sbjct: 64 SAGDTDFQRLAVTSSQRDAVTPCGMCRQTLAEFAADDLTILCDSGDDTAGVVTYT-LGEL 122
Query: 389 LPLSFVSFKKDS 424
LP + + D+
Sbjct: 123 LPDTITASNLDA 134
>UniRef50_Q28N08 Cluster: Cytidine deaminase homotetrameric; n=14;
Rhodobacterales|Rep: Cytidine deaminase homotetrameric -
Jannaschia sp. (strain CCS1)
Length = 132
Score = 88.2 bits (209), Expect = 1e-16
Identities = 49/126 (38%), Positives = 69/126 (54%)
Frame = +2
Query: 32 LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
L+ +A ++R A+ PYSNF VG AI + E + +Y GCN+EN CAE A+A +
Sbjct: 6 LIDQATQVRLNAHAPYSNFKVGCAIRSVEGN-VYVGCNVENVAYPEGTCAEAGAIAAMIA 64
Query: 212 DGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLL 391
G T+ VA++A PCG CRQ L EF +DGD I ++ T T++ LL
Sbjct: 65 AGDTRIAEVAVIAGSPAPVPPCGGCRQKLAEF--ADGDTPITMA-TTQGATQVTQVGALL 121
Query: 392 PLSFVS 409
P F +
Sbjct: 122 PGQFTA 127
>UniRef50_Q15XS0 Cluster: Cytidine deaminase; n=1; Pseudoalteromonas
atlantica T6c|Rep: Cytidine deaminase -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 132
Score = 87.8 bits (208), Expect = 2e-16
Identities = 43/133 (32%), Positives = 74/133 (55%)
Frame = +2
Query: 5 NSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAE 184
N +Q+L A+ ++ +A+ PYS++ VG+A++ E D + Y GCN+EN + CAE
Sbjct: 2 NKQQTDLQSLFNAALDVQAKAHAPYSDYRVGSALVAE-DGKTYTGCNVENVSFPLGQCAE 60
Query: 185 RSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTV 364
+A+A V G + + + I + F +PCG CRQ + EF S D + + S + T+
Sbjct: 61 GNALAAMVAGGARQVREILIASPNEHFCSPCGGCRQRIFEFASKDTLVHMATSEGEIKTL 120
Query: 365 LCTKLSHLLPLSF 403
++ +LP +F
Sbjct: 121 ---SMNEILPFAF 130
>UniRef50_A6LY34 Cluster: Cytidine deaminase; n=1; Clostridium
beijerinckii NCIMB 8052|Rep: Cytidine deaminase -
Clostridium beijerinckii NCIMB 8052
Length = 133
Score = 87.8 bits (208), Expect = 2e-16
Identities = 48/128 (37%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Frame = +2
Query: 26 QNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKA 205
+++L A K + AY PYSN+ VG+ ++T+ D++ + G NIEN++ + CAER+A+ +A
Sbjct: 5 EDILERAFKAMENAYSPYSNYKVGSCVVTK-DNKYFIGANIENASYGLTNCAERNAIFQA 63
Query: 206 VCDGYTK--FKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKL 379
+GY K K +AIV+ PCG CRQ L E + I LS + + T +
Sbjct: 64 YSNGYRKEDVKAIAIVSDGNTLATPCGACRQVLVELL--EKHTPIVLSNKKTEKI--TDI 119
Query: 380 SHLLPLSF 403
LLP+SF
Sbjct: 120 EELLPMSF 127
>UniRef50_A1RTH5 Cluster: Cytidine deaminase; n=3;
Thermoproteaceae|Rep: Cytidine deaminase - Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189)
Length = 138
Score = 87.4 bits (207), Expect = 2e-16
Identities = 49/128 (38%), Positives = 72/128 (56%)
Frame = +2
Query: 23 VQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAK 202
V++L+ +A + AY PYSNF V A + T+ ++Y G N+EN++ ++CAER AV K
Sbjct: 15 VEDLIEKARAVINNAYAPYSNFKVAAVVKTKS-GKVYTGVNVENASYGLTICAERVAVFK 73
Query: 203 AVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLS 382
AV +G V + E T PCG CRQ + EF + D I ++ T V+ +LS
Sbjct: 74 AVSEGDRDIDVVVVYTDTEEPTPPCGACRQVIAEF---NPDALIVMASRT--KVITVRLS 128
Query: 383 HLLPLSFV 406
LLP F+
Sbjct: 129 ELLPRPFI 136
>UniRef50_Q54I82 Cluster: Cytidine deaminase; n=1; Dictyostelium
discoideum AX4|Rep: Cytidine deaminase - Dictyostelium
discoideum AX4
Length = 147
Score = 87.0 bits (206), Expect = 3e-16
Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
E ++ + A ++ A+CPYS+F +GAA+LT +++ G N+ENS+ ++CAER+A
Sbjct: 4 EELEKCIDAAQNSQQYAHCPYSHFRIGAALLTS-CGKIFTGVNVENSSYGLTICAERTAY 62
Query: 197 AKAVCDGYTKFKCVAIVAHQRE-FTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDT 361
KAV +GY FK + + + ++ F PCG CRQ EF GD E+ +P T
Sbjct: 63 TKAVSEGYKSFKGIVVASDLKDRFITPCGACRQFGVEF----GDFEVVCVKPDRST 114
>UniRef50_Q483R7 Cluster: Cytidine deaminase; n=2; Bacteria|Rep:
Cytidine deaminase - Colwellia psychrerythraea (strain
34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 139
Score = 86.6 bits (205), Expect = 4e-16
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
E LL A + +RAY PYS F VGA+ LT D + GCN+EN++ ++CAER+ +
Sbjct: 7 ERFDELLSAAKEAYQRAYAPYSKFHVGASALTT-DGDIVNGCNVENASYGLTICAERNCI 65
Query: 197 AKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEF 307
+ AV G FK + I Q + T PCG CRQ + EF
Sbjct: 66 SHAVVQGKQMFKFIMIYTEQDKLTPPCGACRQVIAEF 102
>UniRef50_Q23RA3 Cluster: Cytidine deaminase family protein; n=1;
Tetrahymena thermophila SB210|Rep: Cytidine deaminase
family protein - Tetrahymena thermophila SB210
Length = 155
Score = 86.6 bits (205), Expect = 4e-16
Identities = 37/97 (38%), Positives = 60/97 (61%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
E +++ + A +++K+AYCPYS F VG IL ++D +M+ G N+EN++ ++CAER+A+
Sbjct: 20 EEIESYIKLAQEVKKKAYCPYSKFHVGC-ILFDQDGKMHEGVNVENASYGLTICAERNAI 78
Query: 197 AKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEF 307
AV G + I + +PCG CRQ + EF
Sbjct: 79 ISAVTKGMKSISLIVINCKTEKVGSPCGACRQVIGEF 115
>UniRef50_Q0FCJ3 Cluster: Cytidine deaminase; n=1; alpha
proteobacterium HTCC2255|Rep: Cytidine deaminase - alpha
proteobacterium HTCC2255
Length = 131
Score = 85.0 bits (201), Expect = 1e-15
Identities = 42/114 (36%), Positives = 67/114 (58%), Gaps = 8/114 (7%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
+T+ LL+ A + A+ PYS+F VGA+IL E+ S + GCN+EN++ ++CAER+A+
Sbjct: 5 DTIDRLLVAAKSVMSNAHVPYSSFHVGASILYEDGS-IEVGCNVENASFGATICAERTAI 63
Query: 197 AKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEF-------CSS-DGDIEI 334
+ + G T + + + PCG+CRQ + EF CS+ DGD +I
Sbjct: 64 SSGIAKGKTAIEAICVTNLTDTMVTPCGICRQVIWEFGKNLPVICSNKDGDYKI 117
>UniRef50_A6NW26 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 134
Score = 85.0 bits (201), Expect = 1e-15
Identities = 48/129 (37%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Frame = +2
Query: 20 TVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVA 199
T + L+ A + +R+Y PYS F VGAA L D ++ GCN+EN+ ++CAER+A+
Sbjct: 2 TDRELVELAFTMLERSYVPYSGFPVGAA-LECADGTVFTGCNVENAAYGSTICAERTALV 60
Query: 200 KAVCDGY-TKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTK 376
KAV +G+ +K +A+V + ++ PCG CRQ L EF D+ + ++R +
Sbjct: 61 KAVSEGHRDDWKRIAVVGNSADYCWPCGSCRQMLYEFAP---DLTVLVARGD-HAFVTLP 116
Query: 377 LSHLLPLSF 403
L LLP F
Sbjct: 117 LKELLPYGF 125
>UniRef50_A5E806 Cluster: Cytidine deaminase; n=1; Lodderomyces
elongisporus NRRL YB-4239|Rep: Cytidine deaminase -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 117
Score = 85.0 bits (201), Expect = 1e-15
Identities = 45/104 (43%), Positives = 62/104 (59%)
Frame = +2
Query: 92 VGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAHQREFTA 271
V A+LTE + G N+EN++ +CAER+A++KAV +GY KFK +AI A E
Sbjct: 10 VSCAVLTELGEYI-TGVNVENASYGAGVCAERTAISKAVSEGYRKFKAIAIAADTEEPIV 68
Query: 272 PCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLPLSF 403
PCG+CRQ + EFC DI ++L D + L LLP+SF
Sbjct: 69 PCGICRQFIREFCH---DIVLFLFNKNGDFIK-VYLKDLLPMSF 108
>UniRef50_Q06549 Cluster: Cytidine deaminase; n=2; Saccharomyces
cerevisiae|Rep: Cytidine deaminase - Saccharomyces
cerevisiae (Baker's yeast)
Length = 142
Score = 85.0 bits (201), Expect = 1e-15
Identities = 47/132 (35%), Positives = 78/132 (59%), Gaps = 2/132 (1%)
Frame = +2
Query: 14 DETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSA 193
D ++ L A+K + +Y PYS+F VG +ILT D ++ G N+EN++ + +CAERSA
Sbjct: 8 DRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDV-IFTGANVENASYSNCICAERSA 66
Query: 194 VAKAVCDGY-TKFKCVAIVA-HQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVL 367
+ + + G+ + +KC+ I + + +PCGVCRQ +NEF D I + S + V+
Sbjct: 67 MIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVM 126
Query: 368 CTKLSHLLPLSF 403
+ LLP++F
Sbjct: 127 --TMGELLPMAF 136
>UniRef50_Q11C52 Cluster: Cytidine deaminase precursor; n=9;
Rhizobiales|Rep: Cytidine deaminase precursor -
Mesorhizobium sp. (strain BNC1)
Length = 131
Score = 84.2 bits (199), Expect = 2e-15
Identities = 48/128 (37%), Positives = 70/128 (54%)
Frame = +2
Query: 20 TVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVA 199
+ L A +RAY PYS F VGAAI T+ + ++AGCNIEN++ CAE +A+
Sbjct: 2 STDELFAAAKAAMERAYAPYSRFPVGAAIRTDAGA-IHAGCNIENASYPEGWCAETTALG 60
Query: 200 KAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKL 379
V G + +A+VA + PCG CRQ L+EF ++D +++L PT V
Sbjct: 61 HMVMAGGGRVSEIAVVAEKMPKIVPCGGCRQRLSEFVTADA--KLHLCSPT-GVVETIPF 117
Query: 380 SHLLPLSF 403
S + P +F
Sbjct: 118 SSVFPRAF 125
>UniRef50_Q1GGB1 Cluster: Cytidine deaminase homotetrameric; n=8;
Alphaproteobacteria|Rep: Cytidine deaminase
homotetrameric - Silicibacter sp. (strain TM1040)
Length = 164
Score = 83.8 bits (198), Expect = 3e-15
Identities = 49/130 (37%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
+T+ L A +R+ A+ PYSNF VGAAI + + +Y GCN+EN CAE A+
Sbjct: 32 DTIHPLRAAAATVRQNAHAPYSNFKVGAAIRAKSGT-VYVGCNVENVAYPEGTCAEAGAI 90
Query: 197 AKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTV-LCT 373
A V G T+ ++A PCG CRQ L EF G E+ ++ T D V + T
Sbjct: 91 AAMVAAGETELLEAYVIADCPSPVPPCGGCRQKLKEF----GAAEVAVTLATTDGVEMQT 146
Query: 374 KLSHLLPLSF 403
+ LLP +F
Sbjct: 147 TIGDLLPGAF 156
>UniRef50_Q0YN38 Cluster: Cytidine deaminase, homotetrameric; n=1;
Geobacter sp. FRC-32|Rep: Cytidine deaminase,
homotetrameric - Geobacter sp. FRC-32
Length = 137
Score = 83.4 bits (197), Expect = 4e-15
Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
Frame = +2
Query: 5 NSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAE 184
NS D T +LL +A R+ AYC YSNF VGAA+LT+ + ++ G N+EN++ + CAE
Sbjct: 3 NSSDTTYLSLLEKADSARENAYCAYSNFKVGAALLTKSGNIIF-GSNVENASYGLTNCAE 61
Query: 185 RSAVAKAVCDGY--TKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMD 358
RSA+ A+ G + +AI A F +PCG CRQ + E S I + +
Sbjct: 62 RSAIFAAISRGIKPQEIDAIAISATGENF-SPCGACRQVIFEMGSQIAVIFRFNGK---- 116
Query: 359 TVLCTKLSHLLPLSF 403
V+ ++S LLP SF
Sbjct: 117 -VVIERISDLLPYSF 130
>UniRef50_A7TIX7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 151
Score = 83.0 bits (196), Expect = 5e-15
Identities = 49/140 (35%), Positives = 76/140 (54%), Gaps = 10/140 (7%)
Frame = +2
Query: 20 TVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVA 199
T+ L E ++ R+ +Y PYS F VG +IL + ++ GCN+E ++ ++CAER+A+
Sbjct: 10 TIDILSRECIRARESSYSPYSKFRVGCSILLT-NGKIIRGCNVEVASFAGTICAERTAIV 68
Query: 200 KAVCD------GYTKF---KCVAIVAHQRE-FTAPCGVCRQTLNEFCSSDGDIEIYLSRP 349
K + D TK +C+ I+ +E PCG+CRQ L EF S I ++ +
Sbjct: 69 KLISDDEDNNGNSTKLQQVECIGIIGDTKEGVITPCGICRQVLREFLPSKTKIVMFNNDG 128
Query: 350 TMDTVLCTKLSHLLPLSFVS 409
T + +L L LLP SF S
Sbjct: 129 TQNEIL--TLEDLLPYSFGS 146
>UniRef50_Q6MKE7 Cluster: Cdd protein; n=1; Bdellovibrio
bacteriovorus|Rep: Cdd protein - Bdellovibrio
bacteriovorus
Length = 134
Score = 82.2 bits (194), Expect = 8e-15
Identities = 40/102 (39%), Positives = 65/102 (63%), Gaps = 1/102 (0%)
Frame = +2
Query: 11 LDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERS 190
+++T + L A K +K+A+ PYS+ +GAA+L D +++ GCN+EN++ ++CAER
Sbjct: 1 MNDTQKKLFEAACKAQKKAHAPYSDALIGAAVLMS-DGQIFNGCNVENASYGGTVCAERV 59
Query: 191 AVAKAVCDGYTK-FKCVAIVAHQREFTAPCGVCRQTLNEFCS 313
A+ KAV +G K K V +V+ + PCG CRQ + EF +
Sbjct: 60 AIFKAVSEGAQKLIKEVLVVSDAEKPWPPCGFCRQVIAEFAN 101
>UniRef50_A1DAY5 Cluster: Cytidine deaminase, putative; n=2;
Trichocomaceae|Rep: Cytidine deaminase, putative -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 153
Score = 82.2 bits (194), Expect = 8e-15
Identities = 40/107 (37%), Positives = 57/107 (53%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
+ ++ L +A+ + AYCPYS F VGA +LT+ + AG N+EN CAER A
Sbjct: 10 QELETLSSKAIAAKANAYCPYSKFRVGACVLTKTGEYI-AGANVENVAYPVGTCAERVAF 68
Query: 197 AKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIY 337
AV G+ FK VA+ +PCG+CRQ + EF + +Y
Sbjct: 69 GTAVAAGHQDFKAVAVATDITPGASPCGMCRQFMREFTPPSFPVFMY 115
>UniRef50_Q39PA5 Cluster: Cytidine deaminase, homotetrameric; n=8;
cellular organisms|Rep: Cytidine deaminase,
homotetrameric - Burkholderia sp. (strain 383)
(Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
R18194))
Length = 129
Score = 81.0 bits (191), Expect = 2e-14
Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Frame = +2
Query: 35 LMEAVKI-RKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
L+EA K R+RAY PYS F VGAA L D ++ GCN+EN++ CAER+A+ A+
Sbjct: 6 LIEAAKAARERAYAPYSRFKVGAA-LQARDGTIFHGCNVENASYGLCNCAERTAIFSAIA 64
Query: 212 DGYT--KFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSH 385
GY F +A+V APCG CRQ + E DIE+ L+ V T
Sbjct: 65 AGYRPGDFTRLAVVGDTDGPIAPCGACRQVIIEI--GTPDIEVILAN-LKGAVEVTTAHA 121
Query: 386 LLPLSF 403
LLP +F
Sbjct: 122 LLPGAF 127
>UniRef50_A4YCQ0 Cluster: Cytidine deaminase; n=1; Metallosphaera
sedula DSM 5348|Rep: Cytidine deaminase - Metallosphaera
sedula DSM 5348
Length = 134
Score = 81.0 bits (191), Expect = 2e-14
Identities = 52/130 (40%), Positives = 64/130 (49%)
Frame = +2
Query: 14 DETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSA 193
D + + LL A K +Y PYS VGAA L E+ + G N+ENS+ S+CAER A
Sbjct: 5 DPSDEELLNLAANAAKNSYSPYSGIRVGAA-LVGENGEVILGTNVENSSYGLSICAERVA 63
Query: 194 VAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCT 373
V AV G KFK +AI PCG CRQ L EF G + ++R
Sbjct: 64 VFTAVTKGIRKFKKIAISLSDGSGIMPCGACRQVLREF----GRDILVITRDKTGKTTTF 119
Query: 374 KLSHLLPLSF 403
L LLP SF
Sbjct: 120 YLDDLLPHSF 129
>UniRef50_A7DID0 Cluster: Cytidine deaminase; n=3;
Methylobacterium|Rep: Cytidine deaminase -
Methylobacterium extorquens PA1
Length = 306
Score = 80.6 bits (190), Expect = 3e-14
Identities = 45/124 (36%), Positives = 63/124 (50%)
Frame = +2
Query: 32 LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
L A +R RA+ PYS F+VGAA L ++ ++AGCN+EN+ CAE A+A +
Sbjct: 178 LFAAAAAVRARAHAPYSGFAVGAA-LVDDAGGVHAGCNVENAAYPVGTCAEAGAIAAMIA 236
Query: 212 DGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLL 391
G + + + ++A PCG CRQ + EF D I + P T L LL
Sbjct: 237 AGGRQIRAILVLADSPAPVTPCGACRQRIREFARP--DTPIVSAGPDGVRARYT-LEQLL 293
Query: 392 PLSF 403
P SF
Sbjct: 294 PASF 297
>UniRef50_A5V1H6 Cluster: Cytidine deaminase; n=5; Bacteria|Rep:
Cytidine deaminase - Roseiflexus sp. RS-1
Length = 136
Score = 80.6 bits (190), Expect = 3e-14
Identities = 41/100 (41%), Positives = 58/100 (58%)
Frame = +2
Query: 5 NSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAE 184
++L + +LL A R+RAYCPYS F+VGAA LT + GCNIEN+ ++CAE
Sbjct: 2 HTLTPDLADLLAVAAAARQRAYCPYSRFAVGAAALTASGVT-FPGCNIENAAYPSTICAE 60
Query: 185 RSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNE 304
R A+ A G + +A++A +PCG CRQ + E
Sbjct: 61 RVALFNAYAAGEREIVALAVIADTPGPVSPCGGCRQVIFE 100
>UniRef50_P47718 Cluster: Cytidine deaminase; n=1; Mycoplasma
pirum|Rep: Cytidine deaminase - Mycoplasma pirum
Length = 133
Score = 80.2 bits (189), Expect = 3e-14
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Frame = +2
Query: 65 AYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAI 244
AY PYSNF V +LT D +AG NIENS +P++CAERSAV+ + G+ + V I
Sbjct: 18 AYVPYSNFRVSCLLLT--DGGWFAGVNIENSAYSPTICAERSAVSSMITSGFKQIFKVYI 75
Query: 245 VAHQ--REFTAPCGVCRQTLNEFCSSDGDIEIY 337
+ ++ PCGVCRQ L+EF + I Y
Sbjct: 76 LTDTIVKDIGTPCGVCRQVLSEFAKPETPIITY 108
>UniRef50_Q839J0 Cluster: Cytidine deaminase; n=4;
Lactobacillales|Rep: Cytidine deaminase - Enterococcus
faecalis (Streptococcus faecalis)
Length = 131
Score = 79.8 bits (188), Expect = 4e-14
Identities = 46/120 (38%), Positives = 66/120 (55%)
Frame = +2
Query: 44 AVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYT 223
AV+ AY PYSNF VGA ++T D +MY G NIEN++ + CAER+A+ KA+ +
Sbjct: 11 AVEALAHAYVPYSNFPVGACLVTA-DGKMYQGVNIENASFGLTNCAERTAIFKAISEDER 69
Query: 224 KFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLPLSF 403
F+ + + + +PCG CRQ + EF D + + L T T + LLP SF
Sbjct: 70 TFQHLVVAGNTEAPISPCGACRQVMAEF--FDPQMPVTLVGKDGATKTMT-VEALLPYSF 126
>UniRef50_Q8EWU5 Cluster: Cytidine deaminase; n=1; Mycoplasma
penetrans|Rep: Cytidine deaminase - Mycoplasma penetrans
Length = 140
Score = 79.4 bits (187), Expect = 6e-14
Identities = 38/106 (35%), Positives = 63/106 (59%)
Frame = +2
Query: 23 VQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAK 202
+ + ++ ++ + AY PYS F V A+I +DS Y G N+ENS+ ++C ER+A++
Sbjct: 6 LNTIFIKLKEVIENAYVPYSKFRV-ASICKADDS-FYYGVNVENSSYPVTLCGERNAIST 63
Query: 203 AVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYL 340
AV +G+ + ++ F PCG+CRQ ++EF SD D IY+
Sbjct: 64 AVSNGHKNITDIYLLTDSNTFATPCGMCRQFMSEFMESD-DCSIYI 108
>UniRef50_A5IXQ5 Cluster: Cytidine deaminase; n=3; Mycoplasma|Rep:
Cytidine deaminase - Mycoplasma agalactiae
Length = 130
Score = 79.0 bits (186), Expect = 8e-14
Identities = 46/123 (37%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Frame = +2
Query: 35 LMEAVK-IRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
++E +K + K AYCP+S+F V AAI +++ + Y G N+EN+ +CAERSA+ +V
Sbjct: 1 MVEKLKSLLKYAYCPWSHFQV-AAIAIDKNGKEYPGVNVENAAFPSGLCAERSALFGSVA 59
Query: 212 DG--YTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSH 385
G FK + I++ + +PC CRQ L EF + IY + D V KLS
Sbjct: 60 HGAEVGTFKEIHIISSSNDVISPCAGCRQVLTEFMPDNA--LIYQYNNSGDNVRVNKLSE 117
Query: 386 LLP 394
L+P
Sbjct: 118 LVP 120
>UniRef50_A4B6B1 Cluster: Cytidine deaminase; n=1; Alteromonas
macleodii 'Deep ecotype'|Rep: Cytidine deaminase -
Alteromonas macleodii 'Deep ecotype'
Length = 149
Score = 79.0 bits (186), Expect = 8e-14
Identities = 36/99 (36%), Positives = 53/99 (53%)
Frame = +2
Query: 23 VQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAK 202
++ L A +K ++ PYSNF VGAA+LT +AGCN+E++ CAE +A+
Sbjct: 20 IEKLSQLAFDAQKNSHSPYSNFKVGAAVLTPS-GETFAGCNVESAAFPLGQCAEATAIGN 78
Query: 203 AVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSD 319
V G + + I + EF PCG CRQ + EF +
Sbjct: 79 MVTQGQKRITHIVIASPNNEFCFPCGGCRQKIAEFAPDE 117
>UniRef50_Q4A8K8 Cluster: Cytidine deaminase; n=3; Mycoplasma
hyopneumoniae|Rep: Cytidine deaminase - Mycoplasma
hyopneumoniae (strain 7448)
Length = 131
Score = 78.2 bits (184), Expect = 1e-13
Identities = 46/130 (35%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
Frame = +2
Query: 23 VQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAK 202
+ + +E K+ K+AYCPYS+F+V AAIL + + G N+EN+ ++CAER A+ +
Sbjct: 1 MNKIFLELEKLSKKAYCPYSDFAV-AAILVTTSGQFFKGVNVENAVFPATICAERVAITQ 59
Query: 203 AVCDGY--TKFKCVAIVA-HQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCT 373
A+ G FK + I + + +F PCG C Q EF S I +Y S+
Sbjct: 60 AIASGVEPKTFKEIHIYSPNTDKFIIPCGQCLQVCAEFFSEKVSIFLYNSKSEFRE---R 116
Query: 374 KLSHLLPLSF 403
L+ LLP F
Sbjct: 117 TLNQLLPNQF 126
>UniRef50_Q3A1I3 Cluster: Cytidine deaminase; n=1; Pelobacter
carbinolicus DSM 2380|Rep: Cytidine deaminase -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 136
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 1/100 (1%)
Frame = +2
Query: 11 LDETVQNLLMEAVK-IRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAER 187
L E + L +A + +++Y PYS F+VGAA+L + S + GCNIEN++ ++CAER
Sbjct: 4 LSEPQRRQLEQAARQAAEKSYSPYSRFAVGAALLAADGS-IATGCNIENASYGLTLCAER 62
Query: 188 SAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEF 307
A+A+AV DG F + + T PCG C Q L EF
Sbjct: 63 VAMARAVADGQRHFIALLLFTATAHPTPPCGACLQMLAEF 102
>UniRef50_Q1AVV9 Cluster: Cytidine deaminase, homotetrameric; n=2;
Bacteria|Rep: Cytidine deaminase, homotetrameric -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 134
Score = 77.8 bits (183), Expect = 2e-13
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +2
Query: 62 RAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV-AKAVCDGYTKFKCV 238
RAY PYS F VGAA++T D +Y+GCN+EN++ S+CAER+AV A + G + + V
Sbjct: 22 RAYAPYSGFRVGAALVTG-DGALYSGCNVENASYGLSVCAERNAVGAMVLGGGDRRIEFV 80
Query: 239 AIVAHQREFTAPCGVCRQTLNEF 307
A+ + + PCG CRQ L EF
Sbjct: 81 AVHSPRAAPCLPCGACRQVLREF 103
>UniRef50_A4BK15 Cluster: Cytidine deaminase; n=1; Reinekea sp.
MED297|Rep: Cytidine deaminase - Reinekea sp. MED297
Length = 133
Score = 77.4 bits (182), Expect = 2e-13
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Frame = +2
Query: 59 KRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGY--TKFK 232
++AY PYS F VGA++ T + GCNIENS+ +CAER+A+A AV G+ +
Sbjct: 17 EKAYAPYSQFPVGASLRTRT-GETFIGCNIENSSYGLGICAERTAIAAAVTAGFGPGDIE 75
Query: 233 CVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIY 337
+A+ +PCG CRQ ++EF D + Y
Sbjct: 76 EMAVYVPDENIASPCGACRQVISEFLDKDKTVTAY 110
>UniRef50_Q7NUX7 Cluster: Cytidine deaminase; n=1; Chromobacterium
violaceum|Rep: Cytidine deaminase - Chromobacterium
violaceum
Length = 166
Score = 77.0 bits (181), Expect = 3e-13
Identities = 49/131 (37%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Frame = +2
Query: 14 DETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSA 193
+E L M A ++AY PYS F+VGAAIL + + +++ GCN+EN++ S CAER+A
Sbjct: 30 NEQWAELEMAAQLAARQAYAPYSRFTVGAAIL-DGNGKIHIGCNVENASYGLSNCAERTA 88
Query: 194 VAKAVCD-GYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLC 370
+ A + G + V I + +PCG CRQ LNEF G S + ++
Sbjct: 89 IFAARANHGMQEVVAVCIYTPTDKPASPCGACRQVLNEF----GPTMRVRSICDGEDIID 144
Query: 371 TKLSHLLPLSF 403
T L LLP +F
Sbjct: 145 TTLDALLPSAF 155
>UniRef50_Q6F1X4 Cluster: Cytidine deaminase; n=2;
Entomoplasmatales|Rep: Cytidine deaminase - Mesoplasma
florum (Acholeplasma florum)
Length = 135
Score = 77.0 bits (181), Expect = 3e-13
Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Frame = +2
Query: 26 QNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKA 205
QN+ E +K++ +Y PYSNF V A ++ ++ + G N+EN+ ++CAER+A+++
Sbjct: 5 QNVFKELLKLKDNSYSPYSNFKV-ACLIYLNNNEIIKGVNVENAAYPATICAERTALSQV 63
Query: 206 VCDGYTK--FKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKL 379
GY K K + + +PCGVCRQ ++E + I IY L T +
Sbjct: 64 YSLGYKKEDIKSLELYTDSESLGSPCGVCRQVISELVNWTTPISIYNKNGFQ---LETNI 120
Query: 380 SHLLPLSF 403
+ LLP +F
Sbjct: 121 NELLPHAF 128
>UniRef50_A2BL19 Cluster: Cytidine deaminase; n=2;
Desulfurococcales|Rep: Cytidine deaminase - Hyperthermus
butylicus (strain DSM 5456 / JCM 9403)
Length = 150
Score = 77.0 bits (181), Expect = 3e-13
Identities = 39/104 (37%), Positives = 56/104 (53%)
Frame = +2
Query: 8 SLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAER 187
SL ++ L A ++ +Y PYS V A +L + D +Y G N+EN + ++CAER
Sbjct: 3 SLGVDLEELFQRAKQVIGNSYAPYSGVHVAAVVLAD-DGTVYLGVNVENVSYGLTICAER 61
Query: 188 SAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSD 319
+AVA + G + K VAIV+ PCG CRQ + EF D
Sbjct: 62 AAVAAMITAGRRRIKAVAIVSDTTLPLPPCGACRQVIAEFADDD 105
>UniRef50_A7JH10 Cluster: Cytidine deaminase; n=11; Francisella
tularensis|Rep: Cytidine deaminase - Francisella
tularensis subsp. novicida GA99-3549
Length = 133
Score = 76.2 bits (179), Expect = 6e-13
Identities = 49/128 (38%), Positives = 66/128 (51%), Gaps = 2/128 (1%)
Frame = +2
Query: 26 QNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKA 205
Q L+ A + AY P+S F VGAA+L + D + NIE S L S+CAER+A+ A
Sbjct: 7 QQLIEYAKEAFNNAYAPFSGFKVGAALLMK-DGNIINSANIETSILGLSVCAERNAIFYA 65
Query: 206 VCDGYTKFKCV--AIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKL 379
GY K V A+VA + +PCG CRQ ++E + D I L+ + L T
Sbjct: 66 YSQGYRKDDIVKIAVVADTEKAISPCGACRQIMSEHLNL--DCPIILTNMSNTDRLDTNT 123
Query: 380 SHLLPLSF 403
LLP F
Sbjct: 124 KELLPYIF 131
>UniRef50_A2FCA3 Cluster: Cytidine deaminase family protein; n=2;
Trichomonas vaginalis G3|Rep: Cytidine deaminase family
protein - Trichomonas vaginalis G3
Length = 138
Score = 76.2 bits (179), Expect = 6e-13
Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Frame = +2
Query: 2 FNSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCA 181
+++ DE V+ + A +K Y PYS++ V AA+L + D + G N+EN + CA
Sbjct: 3 YHTSDEDVKRMFEMATVNQKNCYVPYSHYPVSAALLCK-DGTIVLGVNVENCSYPNGCCA 61
Query: 182 ERSAVAKAVCDGYTKFKCVAIVAHQ-REFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMD 358
ERSA+ AV +G+ F + I + +F PCG+CRQ + E+ G++E+ +S
Sbjct: 62 ERSAIFGAVSNGHRDFVSILITSKMGDDFILPCGMCRQVIAEW----GNLEV-ISTKGNG 116
Query: 359 TVLCTKLSHLLPLSF 403
+ +S LLP +F
Sbjct: 117 EIKRYHISDLLPEAF 131
>UniRef50_A7ERM8 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 217
Score = 76.2 bits (179), Expect = 6e-13
Identities = 48/117 (41%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Frame = +2
Query: 65 AYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTK--FKCV 238
AYCPYS F VGA ILT ++ G N+EN+ CAER A KAV G + FK +
Sbjct: 43 AYCPYSRFRVGATILT-KNGEYIDGANVENAAYPVGTCAERVAFGKAVTGGSREVGFKAL 101
Query: 239 AIVAHQREF--TAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLPLSF 403
+ +PCG+CRQ + EFC D D+ I++ V+ KL LLP+SF
Sbjct: 102 GLSTDGSGDVPASPCGMCRQFIREFC--DLDMPIFMFDNDGKFVV-AKLEELLPMSF 155
>UniRef50_Q1NAQ1 Cluster: Cytidine deaminase; n=2; Sphingomonas|Rep:
Cytidine deaminase - Sphingomonas sp. SKA58
Length = 152
Score = 75.8 bits (178), Expect = 7e-13
Identities = 48/137 (35%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Frame = +2
Query: 14 DETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSA 193
D Q L+ A A+ PYS F+VGAA+ + S + GCN EN++ S+CAE A
Sbjct: 4 DSETQALIAAARGAMAHAHAPYSRFAVGAAVRLTDGS-IVTGCNFENASYGLSLCAETVA 62
Query: 194 VAKAVCDG-YTKFKCVAIV-----AHQREFTAPCGVCRQTLNEFCSSDG-DIEIYLSRPT 352
+A G + +A+V + Q PCG CRQ +NE G + I+ + P+
Sbjct: 63 LATVNAQGRFADVAAIAVVGGAMDSEQEALVTPCGRCRQVMNEAEQMAGRPLVIHCATPS 122
Query: 353 MDTVLCTKLSHLLPLSF 403
D VL L LLP +F
Sbjct: 123 GDRVLALSLPDLLPHAF 139
>UniRef50_Q9PPV9 Cluster: Cytidine deaminase; n=1; Ureaplasma
parvum|Rep: Cytidine deaminase - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 131
Score = 75.4 bits (177), Expect = 1e-12
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Frame = +2
Query: 29 NLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAV 208
++ M +++ K++Y PYSN+ V A + T D +G N+EN + + CAER+A+ A+
Sbjct: 5 DIYMGLLELLKKSYSPYSNYPVAAYVDT--DLGFISGVNVENGSFGLTSCAERNAIFNAI 62
Query: 209 CDGYTKFKCVAIVA-HQREFTAPCGVCRQTLNEFCSSDGDIEIY 337
+G FK V I+ + + +PCG CRQ + EF D I ++
Sbjct: 63 ANGAKTFKTVYIITKNNGDIASPCGACRQVIFEFFKKDAKIVVF 106
>UniRef50_Q5KJY3 Cluster: Cytidine deaminase, putative; n=2;
Filobasidiella neoformans|Rep: Cytidine deaminase,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 138
Score = 75.4 bits (177), Expect = 1e-12
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +2
Query: 80 SNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAH-Q 256
S+ VGAA+L D R Y GCN+EN++ +CAER+AV KAV + F VA+V+
Sbjct: 6 SSGKVGAALLGA-DGRFYGGCNVENASYGAGICAERTAVVKAVSESQQSFLAVAVVSDIP 64
Query: 257 REFTAPCGVCRQTLNEFCSSDGDIEIYLS 343
+PCG+CRQ L EF S D I Y+S
Sbjct: 65 SPSCSPCGICRQFLREFVSLDTPI-FYVS 92
>UniRef50_A2U062 Cluster: Cytidine deaminase; n=7;
Flavobacteria|Rep: Cytidine deaminase - Polaribacter
dokdonensis MED152
Length = 160
Score = 73.7 bits (173), Expect = 3e-12
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Frame = +2
Query: 5 NSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAE 184
+ LD+ + L+ +A++ RK+AY PYS FSVGAA+L ++ + G N EN+ MCAE
Sbjct: 17 SELDKEDKQLMDKAIEARKKAYAPYSKFSVGAALLL-DNGVVVLGNNQENAAYPSGMCAE 75
Query: 185 RSAVAKAVCDGYTKFKCVAI-------VAHQREFTAPCGVCRQTLNEF-CSSDGDIEIYL 340
R A+ +A + Y + K + + ++ + PCG CRQ+L+E+ I
Sbjct: 76 RVAIWRAGSE-YPEMKVLKLAISASSAISKVDKPVGPCGACRQSLSEYEMKQKQSFSILF 134
Query: 341 SRPTMDTVLCTKLSHLLPLSFVS 409
+ + L+ LLP SF S
Sbjct: 135 MGEIGEVIKTNSLASLLPFSFDS 157
>UniRef50_Q4QEF8 Cluster: Cytidine deaminase-like protein; n=6;
Trypanosomatidae|Rep: Cytidine deaminase-like protein -
Leishmania major
Length = 182
Score = 73.7 bits (173), Expect = 3e-12
Identities = 46/122 (37%), Positives = 60/122 (49%), Gaps = 12/122 (9%)
Frame = +2
Query: 11 LDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERS 190
L +Q AV K AY PYSNFSVGAA+L +D + AGCN EN TL S CAER
Sbjct: 21 LPAEMQRAAAAAVAAHKNAYSPYSNFSVGAALL-HDDGSVTAGCNYENCTL-QSCCAERC 78
Query: 191 AVAKAVCDGYTKFKCVAIVAHQ------------REFTAPCGVCRQTLNEFCSSDGDIEI 334
A+ +A +G+ + VA+ PCG+CRQ L E + E
Sbjct: 79 AIVRANVEGHRRANAVAVYGRSYGAATPTNPPPVDALCPPCGLCRQLLVEVADLSQNFEE 138
Query: 335 YL 340
++
Sbjct: 139 FM 140
>UniRef50_A1ZMX8 Cluster: Cytidine deaminase; n=2;
Bacteroidetes|Rep: Cytidine deaminase - Microscilla
marina ATCC 23134
Length = 169
Score = 72.9 bits (171), Expect = 5e-12
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Frame = +2
Query: 29 NLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAV 208
+LL A KI +AY PYSNF VGAAIL +D + G N EN+ +CAER+A+
Sbjct: 31 SLLKAAEKITHQAYAPYSNFLVGAAILL-DDGTVVTGSNQENAAYPSGICAERTAIYYTG 89
Query: 209 CDGYTK-FKCVAIVAHQREF----TAPCGVCRQTLNEFCSSD-GDIEIYLSRPTMDTVLC 370
+ K +A+ A + + APCG CRQ + E+ +I++ L +
Sbjct: 90 AQYPNRTIKAIAVAAQRGDEVFLPAAPCGACRQAMLEYEEKQPHNIQLILQGQEEKVYVV 149
Query: 371 TKLSHLLPLSF 403
+ ++ LLPL F
Sbjct: 150 SSIADLLPLKF 160
>UniRef50_Q7NAQ2 Cluster: Cdd; n=1; Mycoplasma gallisepticum|Rep:
Cdd - Mycoplasma gallisepticum
Length = 144
Score = 72.1 bits (169), Expect = 9e-12
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Frame = +2
Query: 41 EAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAV---- 208
E +++ +AYC YSNF V A IL ++ ++ Y G N+E ++ ++CAER+A+ +
Sbjct: 15 ELLRLLDKAYCVYSNFHV-ACILVDDQNKEYQGVNVEFASYPITLCAERNAIGTMITSSN 73
Query: 209 CDGYTKFKCVAIVAHQREFTA-PCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSH 385
D K + +++ + A PCG+CRQ L EF I IY T T +
Sbjct: 74 SDHLPVIKQIHLMSDSNDSNASPCGMCRQALWEFSDDSTLITIYYKNQTKKTY---QFKQ 130
Query: 386 LLPLSF 403
LLPL F
Sbjct: 131 LLPLGF 136
>UniRef50_Q1VLN9 Cluster: Cytidine deaminase; n=2; Bacteria|Rep:
Cytidine deaminase - Psychroflexus torquis ATCC 700755
Length = 116
Score = 70.9 bits (166), Expect = 2e-11
Identities = 44/119 (36%), Positives = 61/119 (51%)
Frame = +2
Query: 65 AYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAI 244
AY PYS F VG AI +E ++++G N+EN CAE A+A V G +K V +
Sbjct: 2 AYAPYSKFQVGVAIKSES-GQIFSGVNVENVAYPEGTCAEAGAIAAMVAAGESKILEVYV 60
Query: 245 VAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLPLSFVSFKKD 421
+A+ + PCG CRQ + EF +D D+ + LS D T + LLP F D
Sbjct: 61 IANGPKPVPPCGGCRQKIAEF--ADPDVIVTLSNLAGDEEKYT-VRDLLPGVFTQSHMD 116
>UniRef50_Q9RSE7 Cluster: Cytidine deaminase; n=2; Deinococcus|Rep:
Cytidine deaminase - Deinococcus radiodurans
Length = 157
Score = 70.1 bits (164), Expect = 4e-11
Identities = 38/92 (41%), Positives = 49/92 (53%)
Frame = +2
Query: 32 LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
LL A K+AY PYS F VGAA+ T D +++ G N+ENS+ + CAE+SAV
Sbjct: 26 LLAGAQAAFKQAYAPYSKFRVGAALRTP-DGQVFFGANVENSSFGLTRCAEQSAVQALAT 84
Query: 212 DGYTKFKCVAIVAHQREFTAPCGVCRQTLNEF 307
G F + + PCG CRQ L EF
Sbjct: 85 AGGRTFTDLVVYTEASPPATPCGACRQILFEF 116
>UniRef50_Q5NP72 Cluster: Cytidine deaminase; n=6;
Sphingomonadales|Rep: Cytidine deaminase - Zymomonas
mobilis
Length = 161
Score = 69.3 bits (162), Expect = 6e-11
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Frame = +2
Query: 2 FNSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCA 181
F + + TV++L+ +A +++Y PYS F+VGAA+L +D + G N EN++ ++CA
Sbjct: 8 FEAGNITVKSLMDKARTAARQSYSPYSAFAVGAALLL-KDGSVITGTNFENASYGLTLCA 66
Query: 182 ERSAVAKAVCDGY-TKFKCVAIVAHQ--------REFTAPCGVCRQTLNEFCS-SDGDIE 331
E AVA A G+ + +AI + + PCG CRQ LNE DI
Sbjct: 67 ETVAVATANTAGHLAHIRAIAICGGKFDEDRFIGHDIIYPCGRCRQVLNEAAEIGHYDIM 126
Query: 332 IYLSRPTMDTVLCTKLSHLLPLSF 403
+Y + +LS LLP SF
Sbjct: 127 VYCGSAEGSEIEPHRLSTLLPHSF 150
>UniRef50_A3XR06 Cluster: Cytidine deaminase; n=3;
Flavobacteriaceae|Rep: Cytidine deaminase -
Leeuwenhoekiella blandensis MED217
Length = 160
Score = 68.9 bits (161), Expect = 8e-11
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Frame = +2
Query: 2 FNSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCA 181
F+ L + +Q L+ +A R AY PYS F VGAA+L + + G N EN+ +CA
Sbjct: 16 FSELPQDIQQLMKDAFAARDSAYAPYSEFHVGAALLL-SNGEIVKGSNQENAAYPSGLCA 74
Query: 182 ERSAVAKAVC---DGYTKFKCVAIVAHQREFTA---PCGVCRQTLNEF-CSSDGDIEIYL 340
ER+A+ A D + ++ ++ T PCG CRQ + E+ + IY
Sbjct: 75 ERTAIYYAGANFPDEKLEVMAISATGKRKPSTTPIPPCGACRQAIAEYEVKQKQPVVIYF 134
Query: 341 SRPTMDTVLCTKLSHLLPLSF 403
+ LS+LLP F
Sbjct: 135 MGASGKVFKSDSLSNLLPFIF 155
>UniRef50_Q1BCP1 Cluster: Cytidine deaminase, homotetrameric; n=5;
Actinomycetales|Rep: Cytidine deaminase, homotetrameric
- Mycobacterium sp. (strain MCS)
Length = 158
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/96 (38%), Positives = 49/96 (51%)
Frame = +2
Query: 32 LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
L +A++ AY PYS F VGAA L ++D R+ GCN+EN + +CAE S V
Sbjct: 30 LRRKAIEASTLAYAPYSGFPVGAAALVDDD-RIVTGCNVENVSYGLGLCAECSVVCALHS 88
Query: 212 DGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSD 319
G + ++ V E PCG CRQ L E D
Sbjct: 89 GGGGRLVALSCVGPDSEVLMPCGRCRQVLLEHGGPD 124
>UniRef50_UPI00005104F3 Cluster: COG0295: Cytidine deaminase; n=1;
Brevibacterium linens BL2|Rep: COG0295: Cytidine
deaminase - Brevibacterium linens BL2
Length = 164
Score = 67.3 bits (157), Expect = 3e-10
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Frame = +2
Query: 11 LDETVQNLLM-EAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAER 187
L E +LL EA++ + AY PYS++ VGAA L +D R+ +G NIEN++ ++CAE
Sbjct: 25 LSEDTWSLLRDEAMRAMRFAYVPYSSYPVGAAALV-DDGRIVSGANIENASFGVTLCAEC 83
Query: 188 SAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVL 367
S V+ G + V APCG CRQ L E ++ + + R M VL
Sbjct: 84 SLVSDLFMSGGGRIVAFDCVDGAGGTLAPCGRCRQLLFEHGGTEMVLNMPSGRAPMSAVL 143
>UniRef50_Q7U596 Cluster: Putative cytidine/deoxycytidine deaminase;
n=2; Synechococcus|Rep: Putative cytidine/deoxycytidine
deaminase - Synechococcus sp. (strain WH8102)
Length = 130
Score = 67.3 bits (157), Expect = 3e-10
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Frame = +2
Query: 32 LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
LL A + ++A+CPYSNF VGAA+ D + GCN+EN++ ++CAER ++ V
Sbjct: 7 LLAAAREAAEQAHCPYSNFHVGAAVRC-SDGTVVTGCNVENASYGLTICAERVSLFNCVA 65
Query: 212 DGYTKFK-CVAIVAHQREFT----APCGVCRQTLNEFCSSDGDIEI 334
G + V+ V Q + PCG CRQ + E ++ + I
Sbjct: 66 QGLQPLELAVSCVDAQNNTSLSSRMPCGACRQVMQELLPNNAIVHI 111
>UniRef50_Q6FSS3 Cluster: Similar to sp|Q06549 Saccharomyces
cerevisiae YLR245c CDD1 cytidine; n=2;
Saccharomycetales|Rep: Similar to sp|Q06549
Saccharomyces cerevisiae YLR245c CDD1 cytidine - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 205
Score = 65.7 bits (153), Expect = 8e-10
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 8/138 (5%)
Frame = +2
Query: 14 DETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMY--AGCNIENSTLTPSMCAER 187
D ++ L + + +Y PYS + VG IL + R+ G N+EN++ ++CAER
Sbjct: 61 DSELELLRQGCLAAKDVSYSPYSRYRVGCCILVRDGERVIKVTGANVENASYGGTICAER 120
Query: 188 SAVAKAVCDGYTK----FKCVAIVAHQ-REFTAPCGVCRQTLNEFCS-SDGDIEIYLSRP 349
A+ KA+ T+ + + I+ ++ +PCG+CRQ + EF + G + I +
Sbjct: 121 VAITKAMTTVETRDPSQWVALGIMGDSLQDCISPCGICRQVIREFVNPKTGQVPIVMFNG 180
Query: 350 TMDTVLCTKLSHLLPLSF 403
L +LP+SF
Sbjct: 181 DGSNYKKVSLEEILPMSF 198
>UniRef50_A6EPV3 Cluster: Cytidine deaminase; n=1; unidentified
eubacterium SCB49|Rep: Cytidine deaminase - unidentified
eubacterium SCB49
Length = 161
Score = 65.3 bits (152), Expect = 1e-09
Identities = 46/141 (32%), Positives = 67/141 (47%), Gaps = 8/141 (5%)
Frame = +2
Query: 5 NSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAE 184
+ L + +Q L+ +A + R++AY PYS+F VGAA + + + G N EN+ +CAE
Sbjct: 17 SELPQEIQELMNKAQQAREKAYAPYSSFKVGAA-MQLANGEVVLGNNQENAAFPSGLCAE 75
Query: 185 RSAV--AKAVCDGYTKFKCVAIVAHQREF-----TAPCGVCRQTLNEF-CSSDGDIEIYL 340
R A+ A A G +A+ E T PCG CRQ + E+ + I IY
Sbjct: 76 RVAIFYAGATYPG-VAIHNIALTVRSLEHKVDSPTPPCGACRQAIAEYEINQKCPINIYF 134
Query: 341 SRPTMDTVLCTKLSHLLPLSF 403
T V + LLP F
Sbjct: 135 MGETGKVVKAEGIKVLLPFIF 155
>UniRef50_A1SYK7 Cluster: CMP/dCMP deaminase, zinc-binding; n=2;
Psychromonas|Rep: CMP/dCMP deaminase, zinc-binding -
Psychromonas ingrahamii (strain 37)
Length = 135
Score = 65.3 bits (152), Expect = 1e-09
Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Frame = +2
Query: 26 QNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKA 205
+N E K+ A PYS F+V A ++T + +Y G N+E++ ++CAER+A+ A
Sbjct: 3 KNYFTELKKLLDNAQAPYSGFNVAAIVITR-NGNLYKGVNVESAAYPTTICAERNAIHTA 61
Query: 206 VCDGYTK--FKCVAIVAHQRE----FTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVL 367
V +G K K + ++A PCG CRQ + E +D + Y S ++
Sbjct: 62 VTEGMKKGEVKEIHLIARNAAKALIKAQPCGGCRQVIAEQSGNDAIVYSYASALEIEQ-- 119
Query: 368 CTKLSHLLPLSFV 406
++ LLP +F+
Sbjct: 120 -HSINELLPFAFL 131
>UniRef50_Q1QZC4 Cluster: Cytidine deaminase, homotetrameric; n=1;
Chromohalobacter salexigens DSM 3043|Rep: Cytidine
deaminase, homotetrameric - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 140
Score = 64.9 bits (151), Expect = 1e-09
Identities = 33/104 (31%), Positives = 49/104 (47%)
Frame = +2
Query: 2 FNSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCA 181
F L E + L + +R Y PYS VGA +L E R Y GCN+E++ +CA
Sbjct: 6 FTPLSEASRQAL---IAVRDSVYAPYSRHPVGA-LLIAESGRHYLGCNVESANFK-GLCA 60
Query: 182 ERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCS 313
E A+ + G + + ++ PCG CRQ + EF +
Sbjct: 61 EAGAIGAMIAQGEREIVTLYVIGPGHHLCTPCGDCRQRIREFAT 104
>UniRef50_O51563 Cluster: Cytidine deaminase; n=3; Borrelia
burgdorferi group|Rep: Cytidine deaminase - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 154
Score = 64.1 bits (149), Expect = 2e-09
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
E + A K R +Y PYS F VGA I T+ + + G N+EN++ + CAERSA+
Sbjct: 7 EDIDKAFYMAEKARNNSYSPYSKFKVGACIKTKTND-FFIGTNVENASFGATCCAERSAI 65
Query: 197 AKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTK 376
+ + + ++ + PC +C Q + EF + D I I S+ + K
Sbjct: 66 LNMIAKIGVQ-EIDFLLLNTSPECIPCAICLQVMAEFFNQDTKIIITESKSFSENKTPIK 124
Query: 377 LSHLLPLSFVSFKKDSVITVK-TELKKK 457
+ L L F K + V +EL+KK
Sbjct: 125 IYTLKDLLKSPFDKKELRRVTYSELEKK 152
>UniRef50_Q4PD94 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 185
Score = 63.3 bits (147), Expect = 4e-09
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 15/115 (13%)
Frame = +2
Query: 29 NLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAV 208
+LL A + RK +Y PYS F VGAA+LT+ + G N EN++ ++CAER+A+AKA+
Sbjct: 15 DLLHAAQEARKLSYSPYSKFRVGAALLTKW-GEIILGANYENASYGGTVCAERTALAKAL 73
Query: 209 C----------DGYTKFK-----CVAIVAHQREFTAPCGVCRQTLNEFCSSDGDI 328
+ + + VA+ + +PCG+CRQ + E CS + I
Sbjct: 74 IRSDQLDVTEQNSARRIQRGDIIAVAVASDLEGSCSPCGICRQVIREHCSLEARI 128
>UniRef50_Q7MXW9 Cluster: Cytidine deaminase; n=1; Porphyromonas
gingivalis|Rep: Cytidine deaminase - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 158
Score = 62.5 bits (145), Expect = 7e-09
Identities = 44/125 (35%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
Frame = +2
Query: 44 AVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERS----AVAKAVC 211
A++ + AY PYS FSVGAA+L ++ + +G N EN+ +CAER+ A A+
Sbjct: 29 AIEAARSAYAPYSRFSVGAAVLL-DNGEILSGSNQENAAYPSGLCAERTVLFYAGARYPE 87
Query: 212 DGYTKFKCVAIVAHQR-EFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHL 388
+ VA A R PCG CRQ + E CS I L + V + + L
Sbjct: 88 AAVREMVLVAFSASGRVPLITPCGACRQVMLEVCSRHRPFPI-LMVGEEEAVRVSDVRLL 146
Query: 389 LPLSF 403
LP SF
Sbjct: 147 LPFSF 151
>UniRef50_Q6KHU5 Cluster: Cytidine deaminase; n=1; Mycoplasma
mobile|Rep: Cytidine deaminase - Mycoplasma mobile
Length = 142
Score = 62.5 bits (145), Expect = 7e-09
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Frame = +2
Query: 62 RAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFK--- 232
+AY YSNF V A + E++++ Y G NIENS+ +CAERSA+ D F
Sbjct: 18 KAYARYSNFHVAAIV--EKNNKQYFGFNIENSSYPAGICAERSALFAFANDHDWSFNKNH 75
Query: 233 ---CVAIVAHQREFTAPCGVCRQTLNEFCSSD 319
+ I+++ ++ PCG+C Q ++EF +++
Sbjct: 76 KIDAIYIISNLNDYIVPCGMCLQVMSEFLTNE 107
>UniRef50_Q311Y8 Cluster: Extracellular solute-binding protein,
family 3 precursor; n=1; Desulfovibrio desulfuricans
G20|Rep: Extracellular solute-binding protein, family 3
precursor - Desulfovibrio desulfuricans (strain G20)
Length = 396
Score = 61.7 bits (143), Expect = 1e-08
Identities = 45/132 (34%), Positives = 59/132 (44%)
Frame = +2
Query: 11 LDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERS 190
L E L+ +A AY PYS VGAA+LT +++ GCN+EN L + A R+
Sbjct: 263 LPEERAELIKQATAAAINAYAPYSRVPVGAAVLTRS-GKIFTGCNVENPMLNLTGTALRT 321
Query: 191 AVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLC 370
A KAV +G + V V +P RQ L EF G + L P
Sbjct: 322 ATLKAVSEGDIGIRAVVSVGPDGRLLSPSASDRQFLYEF----GRGILALIEPEKGVYEE 377
Query: 371 TKLSHLLPLSFV 406
LS LLP +V
Sbjct: 378 RMLSELLPEPYV 389
>UniRef50_A7IEK0 Cluster: CMP/dCMP deaminase zinc-binding; n=1;
Xanthobacter autotrophicus Py2|Rep: CMP/dCMP deaminase
zinc-binding - Xanthobacter sp. (strain Py2)
Length = 147
Score = 61.7 bits (143), Expect = 1e-08
Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Frame = +2
Query: 35 LMEAVK-IRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
L +A K + K AY PYS F VGAA+L+ + ++ GCN+EN CAE A+A A
Sbjct: 21 LFDAAKAVSKNAYAPYSRFRVGAALLS-ANGTVHVGCNVENIAYPIGTCAEAGAIAAARA 79
Query: 212 DGYTKFKCVAIVAHQRE------FTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCT 373
+ VAI + + PCG CRQ + E S + Y D V+
Sbjct: 80 AEGAGLEAVAIAIYAEKEGEGHVACTPCGACRQRILEL-SPATTVHFY---GLGDKVVSV 135
Query: 374 KLSHLLPLSF 403
+ LLP +F
Sbjct: 136 TAADLLPHAF 145
>UniRef50_UPI00006DC465 Cluster: hypothetical protein
CdifQ_04000854; n=1; Clostridium difficile
QCD-32g58|Rep: hypothetical protein CdifQ_04000854 -
Clostridium difficile QCD-32g58
Length = 132
Score = 61.3 bits (142), Expect = 2e-08
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Frame = +2
Query: 50 KIRKRAYCPYSNFS-VGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTK 226
K+ R P+ + V AAILT+ + +Y G I+ + T MCAER+A+A + +G +K
Sbjct: 13 KLNPRTISPFIDAGGVAAAILTDSGN-VYTGVCIDTAC-TLGMCAERNAIANMITNGESK 70
Query: 227 FKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLP 394
+ V +PCG CR+ L + IEI ++ T TV KLS LLP
Sbjct: 71 ITKLVCVMSNGSVGSPCGACREYLMQLDKDSACIEILVNVETEKTV---KLSELLP 123
>UniRef50_Q0UVU3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 209
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Frame = +2
Query: 122 SRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYT--KFKCVAIVAHQREFTAPCGVCRQT 295
S + G N+EN+ CAER A+ AV GY FK V + +F +PCG+CRQ
Sbjct: 94 SHILTGANVENAAYPVGTCAERVAMGTAVHSGYRIGSFKAVGVATDIDDFCSPCGMCRQF 153
Query: 296 LNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLPLSFVSFKKDSVITVKTELKKKNNE 466
L EF + + I ++ + + LLPLSF V+ + E++K E
Sbjct: 154 LREFLALETPIFMFNKE---GKYIVRTMGELLPLSF----GPDVLPPREEMRKVQEE 203
>UniRef50_Q9A431 Cluster: Cytidine deaminase; n=2; Caulobacter|Rep:
Cytidine deaminase - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 140
Score = 59.7 bits (138), Expect = 5e-08
Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Frame = +2
Query: 5 NSLDETVQNLLMEAVK-IRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCA 181
+++ + V++ + A+ + RAY YS F+V AA++ +E ++ G N+EN+ CA
Sbjct: 4 DTVSKAVEDEIAAALPPLLSRAYARYSKFTVAAAVI-DETGAVHYGVNVENAAYPQGTCA 62
Query: 182 ERSAV-AKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGD-IEIYLSRPT 352
E++A+ A G + V I A PCG CRQ + EF + I + +PT
Sbjct: 63 EQTAIGAMITAAGARRIDKVLIAAGSGAVVQPCGGCRQRIAEFAGEACEIISVQGGKPT 121
>UniRef50_Q64W81 Cluster: Cytidine deaminase; n=8;
Bacteroidales|Rep: Cytidine deaminase - Bacteroides
fragilis
Length = 160
Score = 59.7 bits (138), Expect = 5e-08
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 8/142 (5%)
Frame = +2
Query: 2 FNSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCA 181
++ L++T + LL +A++ +R+Y PYS+FSVGAA L + + G N EN+ +CA
Sbjct: 15 YDELNDTDRALLDDAIEATRRSYAPYSHFSVGAAALL-ANGVVVTGTNQENAAYPSGLCA 73
Query: 182 ERSAVAKAVCDGYTK-FKCVAIVAH-QREF----TAPCGVCRQTLNEFCSS-DGDIEIYL 340
ER+ + A + +AI A +++F PCG CRQ + E I I L
Sbjct: 74 ERTTLFYANSQYPDQAVVTLAIAARTEKDFIDTPIPPCGACRQVILETEKRYKQPIRILL 133
Query: 341 -SRPTMDTVLCTKLSHLLPLSF 403
+ + V + HLLPLSF
Sbjct: 134 YGKKCIYEV--QSIGHLLPLSF 153
>UniRef50_Q3ERG8 Cluster: Cytidine deaminase; n=1; Bacillus
thuringiensis serovar israelensis ATCC 35646|Rep:
Cytidine deaminase - Bacillus thuringiensis serovar
israelensis ATCC 35646
Length = 94
Score = 58.8 bits (136), Expect = 9e-08
Identities = 32/78 (41%), Positives = 46/78 (58%)
Frame = +2
Query: 176 CAERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTM 355
CAER+A+ KAV +G +F +A+VA + PCG CRQ + E C D ++YLS
Sbjct: 15 CAERTALFKAVSEGDKEFVAIAVVADTKRPVPPCGACRQVMVELCKQ--DTKVYLSNLHG 72
Query: 356 DTVLCTKLSHLLPLSFVS 409
D V T + LLP +F++
Sbjct: 73 D-VQETTVGELLPGAFLA 89
>UniRef50_Q98QI2 Cluster: CYTIDINE DEAMINASE; n=1; Mycoplasma
pulmonis|Rep: CYTIDINE DEAMINASE - Mycoplasma pulmonis
Length = 112
Score = 57.6 bits (133), Expect = 2e-07
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +2
Query: 41 EAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGY 220
E + +++Y PYS F V A+I+ ++ + + G N+EN+ +CAERSA+ A+ G+
Sbjct: 7 ELKTLLEKSYSPYSKFKV-ASIVLDKGGKKFKGVNVENAAYPSGICAERSALFGAISHGF 65
Query: 221 T--KFKCVAIVAHQREFTAPCGVCRQTLNE 304
+ I + E APC CRQ + E
Sbjct: 66 KPGSIDKIYIFSSSNEPIAPCLGCRQVMTE 95
>UniRef50_A3HXU1 Cluster: Putative cytidine deaminase; n=1;
Algoriphagus sp. PR1|Rep: Putative cytidine deaminase -
Algoriphagus sp. PR1
Length = 160
Score = 57.2 bits (132), Expect = 3e-07
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Frame = +2
Query: 26 QNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKA 205
Q L+++A +I K AY PYS+F VGAA+ + + N EN + +CAER + A
Sbjct: 24 QELMVQAQEISKNAYAPYSDFQVGAAVRL-KSGLILQSSNQENVSFPVGVCAERLVLGYA 82
Query: 206 VCD-GYTKFKCVAIVAHQR-----EFTAPCGVCRQTLNE 304
+ +AIVA ++ +PCG+CRQ +NE
Sbjct: 83 GANYPLDPVMKIAIVAKRKGEDSWASVSPCGMCRQAINE 121
>UniRef50_Q0C7E4 Cluster: Cytidine deaminase; n=1; Aspergillus
terreus NIH2624|Rep: Cytidine deaminase - Aspergillus
terreus (strain NIH 2624)
Length = 123
Score = 57.2 bits (132), Expect = 3e-07
Identities = 29/64 (45%), Positives = 35/64 (54%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
E V L +A+ + AYCPYSNF VGA ILT + G N+EN+ CAER A
Sbjct: 11 EEVHTLSSKAIAAKSLAYCPYSNFRVGACILT-QSGEYIQGANVENAAYPVGTCAERVAF 69
Query: 197 AKAV 208
AV
Sbjct: 70 GTAV 73
>UniRef50_Q2JF74 Cluster: CMP/dCMP deaminase, zinc-binding; n=35;
Bacteria|Rep: CMP/dCMP deaminase, zinc-binding - Frankia
sp. (strain CcI3)
Length = 159
Score = 56.8 bits (131), Expect = 4e-07
Identities = 38/113 (33%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Frame = +2
Query: 14 DETVQNLLMEAVKIRKRAYCPYSNFSVGAAIL-----------TEEDSRMYAGCNIENST 160
D+ + L AV++ + AY PYS VGAA L T +D + GCN+EN++
Sbjct: 18 DKDWERLRNAAVRVAQSAYAPYSGLRVGAAALVVDLPDAAGRTTGDDPWIVVGCNVENAS 77
Query: 161 LTPSMCAERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSD 319
+CAE V+ G + A V APCG CRQ L E D
Sbjct: 78 YGLGLCAECGLVSALHARGGGRLLAFACVDSDGAPLAPCGRCRQLLYEHGGPD 130
>UniRef50_A4CJP7 Cluster: Cytidine deaminase; n=2;
Flavobacteriales|Rep: Cytidine deaminase - Robiginitalea
biformata HTCC2501
Length = 161
Score = 56.0 bits (129), Expect = 6e-07
Identities = 45/131 (34%), Positives = 60/131 (45%), Gaps = 7/131 (5%)
Frame = +2
Query: 32 LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
LL A + +Y PYS F VGAAI + G N EN++ +CAER AV +A
Sbjct: 26 LLAAAREATSGSYSPYSKFPVGAAI-ELATGEVVIGSNQENASYPSGLCAERVAVFQAGA 84
Query: 212 D-GYTKFKCVAIVAHQ-----REFTAPCGVCRQTLNEF-CSSDGDIEIYLSRPTMDTVLC 370
T + +A+ + APCG CRQ+L E+ +G I I L C
Sbjct: 85 RFPGTPVRTLAVYVGNPGGSLHKPAAPCGNCRQSLLEYEHRQEGPIRILLQAGGGAVYEC 144
Query: 371 TKLSHLLPLSF 403
+ LLPL F
Sbjct: 145 PSIRALLPLGF 155
>UniRef50_P75051 Cluster: Cytidine deaminase; n=3; Mycoplasma|Rep:
Cytidine deaminase - Mycoplasma pneumoniae
Length = 133
Score = 56.0 bits (129), Expect = 6e-07
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +2
Query: 50 KIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCD-GYTK 226
++ AY P+S F V A +L + Y G NIEN++ ++CAERSA+A V G
Sbjct: 14 EVVNHAYTPFSKFKV-ACMLVANNQAFY-GVNIENASYPVTLCAERSAIANMVTSIGKAT 71
Query: 227 FKCVAIVAHQREFT-APCGVCRQTLNEFCS 313
V + + T +PCG+CRQ + EF +
Sbjct: 72 IDYVFVYFDTKTPTNSPCGMCRQNIFEFAT 101
>UniRef50_Q4MV54 Cluster: Cytidine deaminase; n=1; Bacillus cereus
G9241|Rep: Cytidine deaminase - Bacillus cereus G9241
Length = 90
Score = 52.4 bits (120), Expect = 8e-06
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +2
Query: 125 RMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNE 304
++Y G N+EN + + CAER+A+ AV + K +AIV PCG CRQ + E
Sbjct: 6 KIYLGGNVENVSYELTNCAERTAIFNAVSHKEKEVKAIAIVVDIEGQVLPCGGCRQVIAE 65
Query: 305 FCSSD 319
F D
Sbjct: 66 FAGKD 70
>UniRef50_Q1E551 Cluster: Predicted protein; n=2;
Eurotiomycetidae|Rep: Predicted protein - Coccidioides
immitis
Length = 164
Score = 52.4 bits (120), Expect = 8e-06
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +2
Query: 32 LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAV 208
L +A+ + AYCPYS F VGA++L ED + G N+EN++ +CAE+ AV
Sbjct: 46 LSSKAIGAKDVAYCPYSKFRVGASLLA-EDGTFFVGANVENASYPVGICAEKCVFGTAV 103
>UniRef50_Q8S0I1 Cluster: Cytidine/deoxycytidine deaminase-like;
n=5; Oryza sativa|Rep: Cytidine/deoxycytidine
deaminase-like - Oryza sativa subsp. japonica (Rice)
Length = 312
Score = 51.6 bits (118), Expect = 1e-05
Identities = 41/105 (39%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Frame = +2
Query: 17 ETVQNLLMEAV-KIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIE--NSTLTPSMCAER 187
ETV++LL V +RA P S F VGA L R+YAG N+E L+ S+ AE+
Sbjct: 38 ETVEDLLPLLVPSAMRRARAPISRFPVGAVGLGAS-GRVYAGVNLEFRGLPLSHSVHAEQ 96
Query: 188 SAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDG 322
V A G ++ + VA V+H PCG CRQ L E + G
Sbjct: 97 FLVVNAAAAGESELRAVA-VSHM-----PCGHCRQFLQEIRGAGG 135
>UniRef50_Q8EDG1 Cluster: Cytidine deaminase; n=18; Shewanella|Rep:
Cytidine deaminase - Shewanella oneidensis
Length = 296
Score = 49.6 bits (113), Expect = 5e-05
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 4/141 (2%)
Frame = +2
Query: 74 PYSNFSVGAAILTEEDSRMYAGCNIE--NSTLTPSMCAERSAVAKAVCDGYTKFKCVAIV 247
P S F VGA I + +Y G N+E L S+ AE+SA++ A G ++ + +
Sbjct: 66 PISEFYVGA-IAKGKSGDIYMGANLELPGEALFHSVHAEQSAISHAWLSGESQIVDMIVN 124
Query: 248 AHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLPLSF--VSFKKD 421
A +PCG CRQ +NE G I+I+L P+ D+ L LS+ LP +F
Sbjct: 125 A------SPCGHCRQFMNELVDG-GQIKIHL--PSQDSHL---LSYYLPYAFGPKDLNVQ 172
Query: 422 SVITVKTELKKKNNESDSISV 484
S + VK E + + SD + +
Sbjct: 173 SPLLVKQETEFALDSSDPMVI 193
>UniRef50_Q81PF4 Cluster: Cytidine and deoxycytidylate deaminase
family protein; n=7; Firmicutes|Rep: Cytidine and
deoxycytidylate deaminase family protein - Bacillus
anthracis
Length = 143
Score = 48.8 bits (111), Expect = 1e-04
Identities = 33/135 (24%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Frame = +2
Query: 29 NLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAV 208
+L+ A K+ ++ Y Y +G+A+ T+ + +YA ++E + ++C E A+ K++
Sbjct: 13 DLIKAAEKVIEKNY-KYGRHHIGSAVRTKTGN-IYAAVHVEANVGRITVCGEAMAIGKSI 70
Query: 209 CDGYTKFKCVAIVAHQRE--------FTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTV 364
+G +F + VAH APCG+CR+ ++++ + I Y D +
Sbjct: 71 SEGDHEFDTIVAVAHPHPHEDIEKCWVVAPCGMCRELISDYGKNTNVILSY-----NDEL 125
Query: 365 LCTKLSHLLPLSFVS 409
+ + LLP + S
Sbjct: 126 VKCNVMELLPEKYTS 140
>UniRef50_A6EEW1 Cluster: Cytidine deaminase; n=1; Pedobacter sp.
BAL39|Rep: Cytidine deaminase - Pedobacter sp. BAL39
Length = 162
Score = 48.8 bits (111), Expect = 1e-04
Identities = 40/139 (28%), Positives = 61/139 (43%), Gaps = 7/139 (5%)
Frame = +2
Query: 11 LDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERS 190
L + + L ++A + +Y PYS+F VG AI + D ++ G N EN +CAER
Sbjct: 19 LSDVDRQLCLKAEEALNTSYAPYSHFRVGTAIQLKGD-QIVLGSNQENVAYPSGLCAERV 77
Query: 191 AV-AKAVCDGYTKFKCVAIVAHQREF-----TAPCGVCRQTLNEF-CSSDGDIEIYLSRP 349
A+ A + + +AI A F CG C Q + EF +IE+
Sbjct: 78 ALFAIGAANPSAVIERMAITAKADHFQVEQPVTSCGACLQVMAEFEKKQQQEIEVLFYCI 137
Query: 350 TMDTVLCTKLSHLLPLSFV 406
+ + + LLP FV
Sbjct: 138 GGEIMKVRGIRSLLPFVFV 156
>UniRef50_Q3IBX5 Cluster: Cytidine deaminase; n=2;
Alteromonadales|Rep: Cytidine deaminase -
Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 309
Score = 46.8 bits (106), Expect = 4e-04
Identities = 46/137 (33%), Positives = 62/137 (45%), Gaps = 6/137 (4%)
Frame = +2
Query: 11 LDETVQNLLMEAVKIRKR-AYCPYSNFSVGAAILTEEDS---RMYAGCNIE--NSTLTPS 172
L+ T LL V + A P SNF VGA + ++S Y G N E L+
Sbjct: 52 LNVTNDALLQGLVPLASEFAVAPVSNFHVGAIVKALDESGEVNFYFGANAEFNRQALSLV 111
Query: 173 MCAERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPT 352
+ AE+SA+ A +G K +AI APCG CRQ +NE + + +I L
Sbjct: 112 VHAEQSAINNAWLNGAKKILKIAIS------DAPCGYCRQFMNELADA-REFDILLPEQQ 164
Query: 353 MDTVLCTKLSHLLPLSF 403
KL+ LLP SF
Sbjct: 165 F------KLADLLPHSF 175
>UniRef50_Q2S2Q4 Cluster: Cytidine and deoxycytidylate deaminase
zinc-binding region domain protein; n=1; Salinibacter
ruber DSM 13855|Rep: Cytidine and deoxycytidylate
deaminase zinc-binding region domain protein -
Salinibacter ruber (strain DSM 13855)
Length = 431
Score = 45.6 bits (103), Expect = 9e-04
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +2
Query: 8 SLDETVQNLLMEAVK-IRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAE 184
S+D T L +AV+ + +RA+ P S + VG AIL ++ G N+E+ +CAE
Sbjct: 297 SIDGTEDGL--QAVRRVSRRAHVPSSGYPVG-AILETQEGPFVPGVNVEHPDWARILCAE 353
Query: 185 RSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNE 304
R+ + + + + + PCG CRQ L E
Sbjct: 354 RNVLGTMHSYALPSPRRLYLTCDEDPEGTPCGACRQLLAE 393
>UniRef50_A5HYE6 Cluster: Cytidine deaminase; n=5; Firmicutes|Rep:
Cytidine deaminase - Clostridium botulinum A str. ATCC
3502
Length = 125
Score = 44.0 bits (99), Expect = 0.003
Identities = 32/121 (26%), Positives = 56/121 (46%)
Frame = +2
Query: 2 FNSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCA 181
F+ L + +N L KI K +Y SV AAIL+E ++Y G I+ + + CA
Sbjct: 3 FDELYDIAKNALNPR-KISKNSYAG----SVAAAILSES-GKVYTGVCID-TPCSMGFCA 55
Query: 182 ERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDT 361
E +A+A + G + V V PCG CR+ + + + ++ + + + T
Sbjct: 56 EHAAIAAMITAGENRITKVVAVYEDGTIIPPCGRCREFICQIHDENYKCQVMIKKDMIIT 115
Query: 362 V 364
+
Sbjct: 116 I 116
>UniRef50_Q6GV32 Cluster: Small cytidine deaminase; n=2;
Homo/Pan/Gorilla group|Rep: Small cytidine deaminase -
Homo sapiens (Human)
Length = 82
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEE 118
E VQ LL+ + + ++ AYCPYS+F VGAA+LT+E
Sbjct: 13 ECVQQLLVCSQEAKQSAYCPYSHFPVGAALLTQE 46
>UniRef50_A5KJ88 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 299
Score = 43.2 bits (97), Expect = 0.005
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Frame = +2
Query: 5 NSLDETVQNLLMEAVKI-RKRAYCPYSNFS-VGAAILTEEDSRMYAGCNIENSTLTPSMC 178
+ D T + + A + +KR P V AAILTE+ + +Y G I+ + + MC
Sbjct: 168 SQFDGTWDKMYLAARNVQKKREISPLVEAGGVSAAILTEKGN-IYVGVCIDTAC-SLGMC 225
Query: 179 AERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQ 292
AER+A+A + +G + V + PCG CR+
Sbjct: 226 AERNAIANMITNGENGICRLIAVDRNGKAIPPCGACRE 263
>UniRef50_Q7R4V1 Cluster: GLP_440_14428_13814; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_440_14428_13814 - Giardia lamblia
ATCC 50803
Length = 204
Score = 43.2 bits (97), Expect = 0.005
Identities = 34/78 (43%), Positives = 39/78 (50%)
Frame = -1
Query: 306 NSLRVCRHTPQGAVNSL*WATIATHLNFV*PSQTAFATADLSAHIDGVKVEFSMLHPAYI 127
NS +VCRH P G S AT ++F+ PS A TA SAH FS L P I
Sbjct: 17 NSFKVCRHIPHGEPPSRVTTAHAT-MSFL-PSLIALTTAVRSAHTPIGYAAFSTLQPLKI 74
Query: 126 LESSSVSIAAPTEKLE*G 73
SV +AAPT LE G
Sbjct: 75 -SPLSVKMAAPTLYLEYG 91
>UniRef50_Q6F0Z9 Cluster: Cytidine deaminase; n=1; Mesoplasma
florum|Rep: Cytidine deaminase - Mesoplasma florum
(Acholeplasma florum)
Length = 134
Score = 42.3 bits (95), Expect = 0.008
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 98 AAILTEEDSRMYAG-CNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAHQREFTAP 274
A++L +D+ Y G C + + L CAERSA + + + T+ K + + P
Sbjct: 30 ASVLVTKDNNFYTGVCVVMDCAL--GTCAERSAAFQMIKNNETEIKTILTIGRNGYIYPP 87
Query: 275 CGVCRQTLNEFCSSDGDIEIYLSR 346
CG C + + ++ + + Y+S+
Sbjct: 88 CGACLELIKLINPNNKNTQFYISK 111
>UniRef50_A6PPJ0 Cluster: CMP/dCMP deaminase, zinc-binding; n=1;
Victivallis vadensis ATCC BAA-548|Rep: CMP/dCMP
deaminase, zinc-binding - Victivallis vadensis ATCC
BAA-548
Length = 130
Score = 41.9 bits (94), Expect = 0.011
Identities = 28/92 (30%), Positives = 43/92 (46%)
Frame = +2
Query: 89 SVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAHQREFT 268
SV AAILT+ + +Y G I+ + + CAE +A+A V G + + V
Sbjct: 32 SVAAAILTDRGN-VYRGVCID-TPCSMGFCAEHAAIAAMVTAGENRIVKLVAVMEDGSVG 89
Query: 269 APCGVCRQTLNEFCSSDGDIEIYLSRPTMDTV 364
APCG CR+ + + + E+ L TV
Sbjct: 90 APCGRCREFICQIHDDNHRCEVLLEAGRTATV 121
>UniRef50_A6GC47 Cluster: Cytidine deaminase; n=1; Plesiocystis
pacifica SIR-1|Rep: Cytidine deaminase - Plesiocystis
pacifica SIR-1
Length = 297
Score = 41.5 bits (93), Expect = 0.015
Identities = 30/79 (37%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +2
Query: 74 PYSNFSVGAAILTEEDSRMYAGCNIE--NSTLTPSMCAERSAVAKAVCDGYTKFKCVAIV 247
P SNF VGA L R+Y G N+E L ++ AE++A+ A G T + +A
Sbjct: 62 PVSNFRVGAVALGAS-GRVYLGANLEFPGLPLNRTVHAEQAAITVAWVHGETGLRALATS 120
Query: 248 AHQREFTAPCGVCRQTLNE 304
A APCG CRQ + E
Sbjct: 121 A------APCGHCRQFMLE 133
>UniRef50_O65571 Cluster: Cytidine deaminase; n=3; Arabidopsis
thaliana|Rep: Cytidine deaminase - Arabidopsis thaliana
(Mouse-ear cress)
Length = 337
Score = 41.5 bits (93), Expect = 0.015
Identities = 43/127 (33%), Positives = 61/127 (48%), Gaps = 5/127 (3%)
Frame = +2
Query: 29 NLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIE--NSTLTPSMCAERSAVAK 202
NL+ +A+ + A P S + VGA + R+Y G N++ L S+ AE+ V
Sbjct: 50 NLIRKAMCL---ARAPISKYKVGA-VGRASSGRVYLGVNVDFPGLPLHHSIHAEQFLVTN 105
Query: 203 AVCDGYTKFKC---VAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCT 373
+ Y K C VAI EF PCG C Q L E S+ D++I LS+P + +
Sbjct: 106 LALN-YEKDLCKLAVAISTDGLEFGTPCGNCLQFLMEM-SNALDMKI-LSKPKHEAGSFS 162
Query: 374 KLSHLLP 394
L LLP
Sbjct: 163 SLRLLLP 169
>UniRef50_UPI0001554CC0 Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 101
Score = 41.1 bits (92), Expect = 0.019
Identities = 21/50 (42%), Positives = 29/50 (58%)
Frame = +2
Query: 254 QREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLPLSF 403
Q +F APCG CRQ + EF D ++L++P + + L LLPLSF
Sbjct: 48 QDDFVAPCGACRQVMREF---GKDWAVFLAKPD-GSYITHSLQELLPLSF 93
>UniRef50_UPI0000499F7E Cluster: cytidine deaminase; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: cytidine deaminase -
Entamoeba histolytica HM-1:IMSS
Length = 312
Score = 41.1 bits (92), Expect = 0.019
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +2
Query: 65 AYCPYSNFSVGAAILTEEDSRMYAGCNIENST--LTPSMCAERSAVAKAVCDGYTKFKCV 238
A C S F VG +E Y G N+E++ + S+ E+ A+ G K +
Sbjct: 75 ALCKPSQFPVGGCCYCKESGNAYIGFNMESAGRWIGYSVHGEQCTTNNALIHGEKKIDLL 134
Query: 239 AIVAHQREFTAPCGVCRQTLNEFCSSD 319
I +T PCG CRQ LN+F + D
Sbjct: 135 VI-----SYT-PCGHCRQYLNQFANRD 155
>UniRef50_A6D7P0 Cluster: Putative uncharacterized protein; n=1;
Vibrio shilonii AK1|Rep: Putative uncharacterized
protein - Vibrio shilonii AK1
Length = 124
Score = 41.1 bits (92), Expect = 0.019
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +2
Query: 92 VGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAHQ-REFT 268
V AAI T ++++G I+ S + +CAER+A+ V + +FK +V + EF
Sbjct: 27 VSAAIETSS-GQLFSGVCIDTSC-SLGICAERNAIGTMVTE--REFKITKLVCIKGNEFI 82
Query: 269 APCGVCRQTLNEFCSSDGDIEI 334
PCG C++ L + + ++EI
Sbjct: 83 LPCGACQELLMQLHPENAELEI 104
>UniRef50_A4RWY8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 243
Score = 41.1 bits (92), Expect = 0.019
Identities = 30/85 (35%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +2
Query: 74 PYSNFSVGAAILTEEDSRMYAGCNIENST--LTPSMCAERSAVAKAVCDGYTKFKCVAIV 247
P S F VGAA +Y G N+E S L S+ AE+ A+ A+ + K + +A
Sbjct: 4 PTSRFHVGAAA-RGASGNVYLGVNVEISAVPLNHSIHAEQFALVTAMANEERKVEAIATT 62
Query: 248 AHQREFTAPCGVCRQTLNEFCSSDG 322
APCG CRQ +NE + G
Sbjct: 63 E------APCGHCRQFMNELRDAGG 81
Score = 33.1 bits (72), Expect = 5.1
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 44 AVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDG 217
A++ ++AY PYS+ G AI T ++ G ++E + PSM + A+ V G
Sbjct: 152 ALEAMRKAYAPYSSSRAGIAIKT-SCGGVFVGWSLECAAYNPSMSPLQVVFARMVAQG 208
>UniRef50_Q1J4T0 Cluster: Cytidine deaminase; n=1; Streptococcus
pyogenes MGAS10750|Rep: Cytidine deaminase -
Streptococcus pyogenes serotype M4 (strain MGAS10750)
Length = 129
Score = 40.7 bits (91), Expect = 0.025
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +2
Query: 173 MCAERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPT 352
+CAE+SA+A+ V + T K + V PCG CR+ + + + +IE + P
Sbjct: 53 LCAEQSAIAEMVKNNETAIKRIIAVFEDGSILPPCGRCREFIAQI--DNQNIETQIVLPE 110
Query: 353 MDTVLCTKLSHLLP 394
M+ VL L LLP
Sbjct: 111 MEEVL---LKDLLP 121
>UniRef50_Q4WAE7 Cluster: Cytidine deaminase, putative; n=2;
cellular organisms|Rep: Cytidine deaminase, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 128
Score = 40.7 bits (91), Expect = 0.025
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 74 PYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAH 253
P S+ A+ D R++ G N+ + T P CAE + A G T + V +
Sbjct: 22 PVSDTHSVASAARSTDGRIFTGVNVYHFTGGP--CAELVVLGSAAAAGATHLTHIVAVGN 79
Query: 254 Q-REFTAPCGVCRQTL 298
+ R +PCG CRQTL
Sbjct: 80 ENRGVISPCGRCRQTL 95
>UniRef50_P0C2P0 Cluster: Blasticidin-S deaminase; n=4;
Trichocomaceae|Rep: Blasticidin-S deaminase -
Aspergillus terreus
Length = 130
Score = 40.7 bits (91), Expect = 0.025
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +2
Query: 83 NFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAHQ-R 259
++SV +A L+ D R++ G N+ + T P CAE + A C+ + ++ R
Sbjct: 26 DYSVASAALSS-DGRIFTGVNVYHFTGGP--CAELVVLGTAAAAAAGNLTCIVAIGNENR 82
Query: 260 EFTAPCGVCRQTL 298
+PCG CRQ L
Sbjct: 83 GILSPCGRCRQVL 95
>UniRef50_Q2LPJ4 Cluster: Cytidine deaminase; n=1; Syntrophus
aciditrophicus SB|Rep: Cytidine deaminase - Syntrophus
aciditrophicus (strain SB)
Length = 135
Score = 39.9 bits (89), Expect = 0.044
Identities = 28/101 (27%), Positives = 47/101 (46%)
Frame = +2
Query: 92 VGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAHQREFTA 271
VGAA++T+ + +Y G ++ N CAE +A+ + TK + V +
Sbjct: 29 VGAALITDRGN-IYTGISV-NLACNVGSCAEHAAIVDMLKMRETKIAMIVSVYEGGKIIV 86
Query: 272 PCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLP 394
PCG CR+ + + S + + + +DT LS LLP
Sbjct: 87 PCGRCREMIIQIDSQNKNTLV-----IVDTEKTIPLSELLP 122
>UniRef50_A4C4L6 Cluster: Cytidine deaminase; n=1; Pseudoalteromonas
tunicata D2|Rep: Cytidine deaminase - Pseudoalteromonas
tunicata D2
Length = 309
Score = 39.9 bits (89), Expect = 0.044
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Frame = +2
Query: 74 PYSNFSVGAAILTEEDS---RMYAGCNIE--NSTLTPSMCAERSAVAKAVCDGYTKFKCV 238
P S F VGA + E+ + +Y G N+E + L+ + AE++A+ A +G +
Sbjct: 65 PISEFYVGAIAVGEQINGFGALYFGANLEFNHQALSLVVHAEQAALNTAWLNGEKTISVL 124
Query: 239 AIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYL 340
AI APCG CRQ +NE + DI I L
Sbjct: 125 AIT------DAPCGYCRQFINEL-NQSSDITILL 151
>UniRef50_A1JTY3 Cluster: Cytidine deaminase; n=4; Yersinia|Rep:
Cytidine deaminase - Yersinia enterocolitica serotype
O:8 / biotype 1B (strain 8081)
Length = 294
Score = 39.9 bits (89), Expect = 0.044
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Frame = +2
Query: 65 AYCPYSNFSVGAAILTEEDSRMYAGCNIENS--TLTPSMCAERSAVAKAVCDGYTKFKCV 238
A P SNF VGA I +Y G N+E S L ++ AE+ AV A +
Sbjct: 64 ALTPVSNFKVGA-IARGVSGNLYFGANMEFSGAPLQQTIHAEQCAVTHAWLRNEASLVSI 122
Query: 239 AIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYL-SRP 349
+ +T PCG CRQ +NE S G + I+L +RP
Sbjct: 123 TV-----NYT-PCGHCRQFMNELNSGTG-LHIHLPNRP 153
>UniRef50_Q8DA31 Cluster: Cytidine deaminase; n=44;
Gammaproteobacteria|Rep: Cytidine deaminase - Vibrio
vulnificus
Length = 295
Score = 39.9 bits (89), Expect = 0.044
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Frame = +2
Query: 65 AYCPYSNFSVGAAILTEEDSRMYAGCNIE--NSTLTPSMCAERSAVAKAVCDGYTKFKCV 238
+Y P S F VGA I+ +Y G N+E L ++ AE+SA++ A G +
Sbjct: 64 SYAPISEFYVGA-IVRGLSGALYFGANMEFDGVQLGQTVHAEQSAISHAWMKGEQGLSDI 122
Query: 239 AIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLPLSF 403
I F+ PCG CRQ +NE S+ E+ + P + KL LP SF
Sbjct: 123 TI-----NFS-PCGHCRQFMNELSSAK---ELKIQLPEREE---KKLHDYLPDSF 165
Score = 35.9 bits (79), Expect = 0.72
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 32 LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSM 175
L+ AV+ R++ PY++ G A+ TE R+Y G EN+ PS+
Sbjct: 192 LMQRAVEAMNRSHAPYTHNLSGVALQTES-GRVYLGAYAENAAFNPSL 238
>UniRef50_Q0BSC1 Cluster: Blasticidin-S deaminase; n=1;
Granulibacter bethesdensis CGDNIH1|Rep: Blasticidin-S
deaminase - Granulobacter bethesdensis (strain ATCC
BAA-1260 / CGDNIH1)
Length = 124
Score = 37.9 bits (84), Expect = 0.18
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Frame = +2
Query: 98 AAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAHQRE----- 262
AA L + + R++ G ++ + +CAE A+ +A +G + V V H ++
Sbjct: 18 AAALRDANGRIWTGLHLGATVGRLQICAEAIALGRAKLEGAADIETVVAVRHPKQDEPDQ 77
Query: 263 ---FTAPCGVCRQTLNEFCSS 316
+PCG CR+ +F S
Sbjct: 78 DIAVVSPCGACREMFADFAPS 98
>UniRef50_A5ERK0 Cluster: Cytidine deaminase family enzyme; n=7;
Bradyrhizobiaceae|Rep: Cytidine deaminase family enzyme
- Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
Length = 139
Score = 37.9 bits (84), Expect = 0.18
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Frame = +2
Query: 92 VGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCD-GYTKFKCVAIVAHQR--- 259
VGAA+ T D R+ G NI+ ++CAE A+ +A+ + G + + V H +
Sbjct: 28 VGAAMRTR-DGRIITGVNIDAYLGRNAVCAEAIAIGRAITEHGDHGIETIVAVRHPKPGE 86
Query: 260 ----EFTAPCGVCRQTLNEF 307
+PCG CR+ ++++
Sbjct: 87 PGEVAVVSPCGTCRELIHDY 106
>UniRef50_Q9XEX5 Cluster: Cytidine deaminase; n=5; Arabidopsis
thaliana|Rep: Cytidine deaminase - Arabidopsis thaliana
(Mouse-ear cress)
Length = 304
Score = 37.9 bits (84), Expect = 0.18
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Frame = +2
Query: 11 LDETVQNLLMEAVK-IRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIE--NSTLTPSMCA 181
L +V LL VK + A P S F+V A + R++ G N+E N L S+ A
Sbjct: 20 LGVSVIQLLPSLVKPAQSYARTPISKFNV-AVVGLGSSGRIFLGVNVEFPNLPLHHSIHA 78
Query: 182 ERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRP 349
E+ V +G A+ A APCG CRQ L E + +I+I ++ P
Sbjct: 79 EQFLVTNLTLNGERHLNFFAVSA------APCGHCRQFLQEIRDAP-EIKILITDP 127
>UniRef50_Q9CP11 Cluster: Cytidine deaminase; n=6;
Pasteurellaceae|Rep: Cytidine deaminase - Pasteurella
multocida
Length = 294
Score = 37.1 bits (82), Expect = 0.31
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
ET +++ A++ A+ PYS G AI T+ D ++Y G EN+ PS+ A + A+
Sbjct: 188 ETQDPVMLTALECANAAHAPYSKSYHGIAIETK-DKQIYRGSYAENAAFNPSLPALQVAL 246
Query: 197 AKAVCDGYT 223
+ G T
Sbjct: 247 NHLLLSGDT 255
Score = 35.5 bits (78), Expect = 0.96
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +2
Query: 20 TVQNLLMEAVKIRKR-AYCPYSNFSVGAAILTEEDSRMYAGCNIE--NSTLTPSMCAERS 190
T Q L ++ + I + P S F VGA + + + Y G N+E ++ + ++ AE+S
Sbjct: 49 TPQQLALKLLPIAAAYSLAPISQFHVGAIAIGQRGA-YYFGANLEFASTHIQQTVHAEQS 107
Query: 191 AVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNE 304
A++ A + + V + +T PCG CRQ +NE
Sbjct: 108 AISHAWMNHESAITDVVV-----NYT-PCGHCRQFMNE 139
>UniRef50_P44325 Cluster: Cytidine deaminase; n=11; Haemophilus
influenzae|Rep: Cytidine deaminase - Haemophilus
influenzae
Length = 292
Score = 37.1 bits (82), Expect = 0.31
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +2
Query: 80 SNFSVGAAILTEEDSRMYAGCNIE--NSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAH 253
S+F+VGA + E+ Y G N E NS + ++ AE+SA++ A + + +
Sbjct: 68 SHFNVGAIAIGEQGD-FYFGANQEFANSAIQQTIHAEQSAISHAWLRNERRISDMVV--- 123
Query: 254 QREFTAPCGVCRQTLNEFCSSDGDIEIYL 340
+T PCG CRQ +NE ++ I I+L
Sbjct: 124 --NYT-PCGHCRQFMNELHGAE-KISIHL 148
Score = 35.5 bits (78), Expect = 0.96
Identities = 19/56 (33%), Positives = 34/56 (60%)
Frame = +2
Query: 29 NLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAV 196
+L+ +A+ +++CPYSN G AIL ++S + G EN+ PS+ A ++A+
Sbjct: 190 DLVNQAILAANQSHCPYSNSPHGIAILF-KNSDVVTGRYAENAAFNPSLPALQTAL 244
>UniRef50_P33967 Cluster: Blasticidin-S deaminase; n=1; Bacillus
cereus|Rep: Blasticidin-S deaminase - Bacillus cereus
Length = 140
Score = 37.1 bits (82), Expect = 0.31
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Frame = +2
Query: 92 VGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAHQRE--- 262
VGAAI T+ + + +IE ++CAE A+ AV +G F + V H
Sbjct: 32 VGAAIRTKT-GEIISAVHIEAYIGRVTVCAEAIAIGSAVSNGQKDFDTIVAVRHPYSDEV 90
Query: 263 -----FTAPCGVCRQTLNEF 307
+PCG+CR+ ++++
Sbjct: 91 DRSIRVVSPCGMCRELISDY 110
>UniRef50_Q97NG2 Cluster: Cytidine/deoxycytidylate deaminase family
protein; n=15; Lactobacillales|Rep:
Cytidine/deoxycytidylate deaminase family protein -
Streptococcus pneumoniae
Length = 144
Score = 36.7 bits (81), Expect = 0.41
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = +2
Query: 77 YSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAV-CDGYTKFKCVAIVAH 253
Y+N V A + D +++ G +E + +CAER+A+ G TK K V
Sbjct: 25 YANHVVAA--VEAGDGQIFTGFCMEGTCGVFHLCAERAALFNMYQFSGQTKVKKVLAFRD 82
Query: 254 QREF----TAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLP 394
+ + PCG CR+ L E + + D E + TV K++ L+P
Sbjct: 83 KPPYGGSSAMPCGACREFLLELNAENKDAEFMMDYNIRKTV---KVAELIP 130
>UniRef50_Q6D3B4 Cluster: Cytidine deaminase; n=66; cellular
organisms|Rep: Cytidine deaminase - Erwinia carotovora
subsp. atroseptica (Pectobacterium atrosepticum)
Length = 296
Score = 35.9 bits (79), Expect = 0.72
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Frame = +2
Query: 65 AYCPYSNFSVGAAILTEEDSRMYAGCNIENST--LTPSMCAERSAVAKAVCDGYTKFKCV 238
A SNF VGA I Y G N+E + L ++ AE+SAV+ A + V
Sbjct: 64 AQASISNFQVGA-IAQGLSGNFYFGANMEFTAVQLQQTVHAEQSAVSHAWLRNERGLRAV 122
Query: 239 AIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTVLCTKLSHLLPLSF 403
+ +T PCG CRQ +NE ++ + I L P + LSH LP +F
Sbjct: 123 TV-----NYT-PCGHCRQFMNELRNA-ASLRIQL--PGRQPAV---LSHYLPDAF 165
>UniRef50_Q9XHQ7 Cluster: Cytidine deaminase 9; n=5; Arabidopsis
thaliana|Rep: Cytidine deaminase 9 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 298
Score = 35.5 bits (78), Expect = 0.96
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 11 LDETVQNLL-MEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAER 187
LD + N L A+K R+Y PYS G A++ + R+Y+G +IE S P + A +
Sbjct: 184 LDSEICNHLGCRALKAANRSYAPYSKSPSGVALM-DFQGRVYSGWSIE-SVANPILGAAQ 241
Query: 188 SAVAKAVCDG 217
+A+ + +G
Sbjct: 242 AALVDFMTNG 251
>UniRef50_UPI0000584B30 Cluster: PREDICTED: similar to cytidine
deaminase; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to cytidine deaminase -
Strongylocentrotus purpuratus
Length = 171
Score = 35.1 bits (77), Expect = 1.3
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +2
Query: 254 QREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTM 355
++ ++ PCG CRQ + EF S D+++Y++RP +
Sbjct: 79 EKLYSTPCGACRQIMYEFGS---DMDVYMTRPDL 109
>UniRef50_A6FJF8 Cluster: Cytidine deaminase; n=1; Moritella sp.
PE36|Rep: Cytidine deaminase - Moritella sp. PE36
Length = 297
Score = 35.1 bits (77), Expect = 1.3
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Frame = +2
Query: 17 ETVQNLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIE--NSTLTPSMCAERS 190
ET + LL + P S+F+VGA I +Y G N E + L S+ AE++
Sbjct: 48 ETPELLLSLLPLAAAYSVAPISDFNVGA-IARAGSGNLYFGANYEFTHQALFNSVHAEQA 106
Query: 191 AVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQTLNEF-CSSDGDIEI 334
A+ A + + + +PCG CRQ +NE C+ + + +
Sbjct: 107 AINNAFSHHESAILDITVT------DSPCGHCRQFMNELHCAPELSVNL 149
Score = 33.5 bits (73), Expect = 3.9
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 32 LLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVC 211
L+ A+K +Y PYS+ G A+ T + + AG IEN+ PS+ +S +
Sbjct: 194 LVQAALKAANDSYAPYSHCHAGIALKTTTGT-VIAGRYIENAAFNPSLSPMQSVLVNLNL 252
Query: 212 DGY 220
G+
Sbjct: 253 AGF 255
>UniRef50_A7PE94 Cluster: Chromosome chr11 scaffold_13, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr11 scaffold_13, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 255
Score = 35.1 bits (77), Expect = 1.3
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +2
Query: 29 NLLMEAVKIRKRAYCPYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAV 208
+L EA++ +++ PYS G A++ E R+Y G +E++ PS+ ++A+ +
Sbjct: 143 SLKYEALEAANKSHAPYSGCPSGVALIDSE-GRVYRGSYMESAAYNPSLGPVQAALVAYI 201
Query: 209 CDG 217
G
Sbjct: 202 AGG 204
>UniRef50_A4TG49 Cluster: Putative uncharacterized protein; n=1;
Mycobacterium gilvum PYR-GCK|Rep: Putative
uncharacterized protein - Mycobacterium gilvum PYR-GCK
Length = 100
Score = 34.7 bits (76), Expect = 1.7
Identities = 24/79 (30%), Positives = 35/79 (44%)
Frame = +2
Query: 89 SVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAHQREFT 268
+VGAAI T C S+L CAE SA A + G ++ + V
Sbjct: 4 TVGAAIETATGDVFVGVCVDTASSL--GFCAEHSAAAAMLTAGQSEIVRMVAVDRHGAVL 61
Query: 269 APCGVCRQTLNEFCSSDGD 325
APCG CR+ + + ++ D
Sbjct: 62 APCGRCREFIIQLDEANVD 80
>UniRef50_A6AKL5 Cluster: Ggdef family protein; n=2; Vibrio
harveyi|Rep: Ggdef family protein - Vibrio harveyi HY01
Length = 513
Score = 34.3 bits (75), Expect = 2.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 283 YPAGRSEFSLMGYYSHTFKFRVTVTDSLRNSRP 185
YP + SL+G+YS +F + + D ++N+RP
Sbjct: 159 YPRTETNLSLLGFYSSRLRFELILDDIIKNNRP 191
>UniRef50_Q2SSF1 Cluster: Riboflavin kinase (Flavokinase) domain
protein; n=2; Mycoplasma|Rep: Riboflavin kinase
(Flavokinase) domain protein - Mycoplasma capricolum
subsp. capricolum (strain California kid / ATCC27343 /
NCTC 10154)
Length = 184
Score = 33.9 bits (74), Expect = 2.9
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -3
Query: 115 FGKYSGTNRKIGIRTIGPFPNFDSFHQQILNSLIQRIK 2
F K N K I TIG F F +HQ+I+N +IQ K
Sbjct: 8 FNKLKKLNIKKAIITIGNFDGFHIYHQKIINKVIQIAK 45
>UniRef50_Q4AGH7 Cluster: Cytidine deaminase; n=1; Chlorobium
phaeobacteroides BS1|Rep: Cytidine deaminase -
Chlorobium phaeobacteroides BS1
Length = 115
Score = 33.1 bits (72), Expect = 5.1
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Frame = +2
Query: 116 EDSRMYAGCNIENSTLTPSMCAERSAV--AKAVCDGYTKFKCVAIVAHQREFT-----AP 274
E+ G N EN+ +CAER A+ A++ G +AI A F P
Sbjct: 3 ENGEFVLGSNQENTAYPSGLCAERVALFHAQSTFPG-VPVLALAITAQCDHFVTKDPITP 61
Query: 275 CGVCRQTLNE 304
CG CRQ ++E
Sbjct: 62 CGSCRQVISE 71
>UniRef50_UPI0000F2098E Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 465
Score = 32.3 bits (70), Expect = 8.9
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = -2
Query: 185 SLRTSMVSKWSSQCCIRRTFSNLLR*V*RHQQKNWN 78
++ + +++K SS+ I+RTFS+LLR R + ++WN
Sbjct: 108 NMASKIMTKSSSKASIKRTFSSLLRRGKRKENESWN 143
>UniRef50_Q5WLB7 Cluster: Putative uncharacterized protein; n=1;
Bacillus clausii KSM-K16|Rep: Putative uncharacterized
protein - Bacillus clausii (strain KSM-K16)
Length = 195
Score = 32.3 bits (70), Expect = 8.9
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = -3
Query: 253 MGYYSHTFKFRVTVTDSLRNSRPLCAHRWCQSGVLNVASGVHSRIFFGKYSGTN-RKIGI 77
+G S T+ + + +N A RW SG++ ++ S + +YS TN +
Sbjct: 55 LGQQSTTYAYASGLAQQYKNITSTGATRWNNSGIVRISYSASSNNYIHQYSNTNTNTVAY 114
Query: 76 RTIGPFPNFDS 44
T F N S
Sbjct: 115 ATAQTFNNHKS 125
>UniRef50_Q5AQP1 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 589
Score = 32.3 bits (70), Expect = 8.9
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 74 PYSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAH 253
PYSN+ + A E + A CN+E T TP++ +++ GY CV H
Sbjct: 190 PYSNYDIEMANAWAE---IQARCNLEYPTATPTLETNVTSLGNYAPSGYATAACVGGRTH 246
Query: 254 Q 256
+
Sbjct: 247 E 247
>UniRef50_Q7VMJ6 Cluster: Cytidine deaminase; n=2;
Pasteurellaceae|Rep: Cytidine deaminase - Haemophilus
ducreyi
Length = 299
Score = 32.3 bits (70), Expect = 8.9
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +2
Query: 65 AYCPYSNFSVGAAILTEEDSRMYAGCNIENS--TLTPSMCAERSAVAKAVCDGYTKFKCV 238
A P S+F VGA + S Y G N E + + ++ AE+SA++ A G +
Sbjct: 72 ALTPVSHFCVGAVAIGLSGS-FYFGANQEFAGIAMQQTVHAEQSAISHAWLAGEGAISDM 130
Query: 239 AIVAHQREFTAPCGVCRQTLNEFCSSDGDIEIYLSRPTMDTV 364
+ PCG CRQ +NE ++ ++I+L +T+
Sbjct: 131 VVNC------TPCGHCRQFMNEL-NTATTLQIHLPHRQHNTL 165
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,650,008
Number of Sequences: 1657284
Number of extensions: 10071393
Number of successful extensions: 23627
Number of sequences better than 10.0: 154
Number of HSP's better than 10.0 without gapping: 22933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23468
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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