Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1759
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    26   0.28 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    26   0.28 
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   7.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   7.9  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +2

Query: 5   NSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILT 112
           + +DET+ +  ++ VKIR + Y  Y + ++  A +T
Sbjct: 104 SKIDETLNSKPLKPVKIRTKVYLVYCSSALVLAAMT 139


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 25.8 bits (54), Expect = 0.28
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +2

Query: 5   NSLDETVQNLLMEAVKIRKRAYCPYSNFSVGAAILT 112
           + +DET+ +  ++ VKIR + Y  Y + ++  A +T
Sbjct: 100 SKIDETLNSKPLKPVKIRTKVYLVYCSSALVLAAMT 135


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 15/64 (23%), Positives = 23/64 (35%)
 Frame = +2

Query: 77  YSNFSVGAAILTEEDSRMYAGCNIENSTLTPSMCAERSAVAKAVCDGYTKFKCVAIVAHQ 256
           Y N +V   + +E   + Y  C ++    TP      +   K V     K  C      Q
Sbjct: 23  YDNINVDEILASERLLKNYFNCIMDRGACTPD-----ADELKRVLPDALKSDCAKCSEKQ 77

Query: 257 REFT 268
           +E T
Sbjct: 78  KEMT 81


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 11/43 (25%), Positives = 17/43 (39%)
 Frame = -3

Query: 307 ELVEGLPTYPAGRSEFSLMGYYSHTFKFRVTVTDSLRNSRPLC 179
           +L  GL   P G          +  F +++TV +S  N    C
Sbjct: 457 DLSRGLDFQPRGSVFVRFTHLQNQDFTYKITVNNSGNNRMGTC 499


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,476
Number of Sequences: 336
Number of extensions: 2524
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)