Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1759
         (597 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.0  
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    21   6.9  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   6.9  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   6.9  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    21   6.9  
AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    21   9.2  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -3

Query: 559 GLLKPLNFFHLLFLLIEAVKLHLRNNAD 476
           G LKP +   L   L EAV++H   + D
Sbjct: 225 GFLKPDSSSELATRLAEAVRIHFTASRD 252


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/31 (25%), Positives = 12/31 (38%)
 Frame = +2

Query: 77  YSNFSVGAAILTEEDSRMYAGCNIENSTLTP 169
           Y N  +   + TE     Y  C ++    TP
Sbjct: 28  YDNVDIDVVLNTERLLNAYVNCLLDQGPCTP 58


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 176 CAERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQT 295
           C+   +V K  C+G+   +    VA    F+  C  CR++
Sbjct: 60  CSGDISVTK--CEGFCNSQVQPSVASTTGFSKECYCCRES 97


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 176 CAERSAVAKAVCDGYTKFKCVAIVAHQREFTAPCGVCRQT 295
           C+   +V K  C+G+   +    VA    F+  C  CR++
Sbjct: 60  CSGDISVTK--CEGFCNSQVQPSVASTTGFSKECYCCRES 97


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/31 (25%), Positives = 12/31 (38%)
 Frame = +2

Query: 77  YSNFSVGAAILTEEDSRMYAGCNIENSTLTP 169
           Y N  +   + TE     Y  C ++    TP
Sbjct: 28  YDNVDIDVVLNTERLLNAYVNCLLDQGPCTP 58


>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -3

Query: 340 QVDFDVTVRTTELVEGLPTYPAGRSEFSLMGYYSH 236
           QVDF    +    V  LP   AG+S  ++    SH
Sbjct: 124 QVDFVADYKIEGKVLLLPVRGAGKSNITMYDLKSH 158


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,890
Number of Sequences: 438
Number of extensions: 2904
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)