Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1754
         (335 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   1.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   4.0  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   7.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   7.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   7.0  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    20   9.2  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -1

Query: 50  YTCDIVRSLFEHDARL 3
           Y CD+    FEH  +L
Sbjct: 148 YKCDVCERAFEHSGKL 163


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 63   LPSGNLFRELQDVTDTGYF 119
            LP G+LF +  D TD G +
Sbjct: 1326 LPEGSLFIKEVDRTDAGEY 1344


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -3

Query: 96  LEVRGKDCHWVARP 55
           ++   K C W ARP
Sbjct: 294 IDANTKPCTWAARP 307


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -3

Query: 96  LEVRGKDCHWVARP 55
           ++   K C W ARP
Sbjct: 294 IDANTKPCTWAARP 307


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -3

Query: 96  LEVRGKDCHWVARP 55
           ++   K C W ARP
Sbjct: 294 IDANTKPCTWAARP 307


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +3

Query: 3   ETRVVFKQTSYDIARITMDVLPSGNLFRELQDV 101
           E ++V ++ S +  R+ + VLP     +  QD+
Sbjct: 221 EVQLVIEEQSTEQERLLLSVLPEHVAVKMRQDL 253


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,850
Number of Sequences: 438
Number of extensions: 1762
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)