Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1750
         (325 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Y020 Cluster: Putative uncharacterized protein; n=1; ...    37   0.099
UniRef50_UPI000065CCCA Cluster: Homolog of Homo sapiens "PREDICT...    33   0.92 
UniRef50_Q8IJJ6 Cluster: Putative uncharacterized protein; n=1; ...    32   2.1  
UniRef50_Q4GZD7 Cluster: Putative uncharacterized protein; n=1; ...    31   6.5  
UniRef50_A0CJM8 Cluster: Chromosome undetermined scaffold_2, who...    31   6.5  
UniRef50_Q8ILJ1 Cluster: Putative uncharacterized protein; n=5; ...    30   8.6  
UniRef50_Q7RE53 Cluster: Putative uncharacterized protein PY0521...    30   8.6  

>UniRef50_Q4Y020 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 71

 Score = 36.7 bits (81), Expect = 0.099
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = -3

Query: 215 FICLCVFGLRNHDIASIFYFHCYFRVV*YSNDGLILNQFYIFYFILD*LLML 60
           ++ +  F +R H+I  +FY   +F ++ + +  LIL   Y+F FI+  LL L
Sbjct: 15  YVIIIFFFMRPHNIRVLFYLFFFFEIIIFKHFFLILIIVYVFNFIMAMLLFL 66


>UniRef50_UPI000065CCCA Cluster: Homolog of Homo sapiens "PREDICTED
           "similar to myeloid-associated differentiation marker;
           n=1; Takifugu rubripes|Rep: Homolog of Homo sapiens
           "PREDICTED "similar to myeloid-associated
           differentiation marker - Takifugu rubripes
          Length = 271

 Score = 33.5 bits (73), Expect = 0.92
 Identities = 19/68 (27%), Positives = 34/68 (50%)
 Frame = -3

Query: 260 EFIFNVIIDLNFKI*FICLCVFGLRNHDIASIFYFHCYFRVV*YSNDGLILNQFYIFYFI 81
           EF+FN++  L++ +  I  CVF   ++  +      CY+  V     G ILN   +  ++
Sbjct: 205 EFVFNIVAVLSYLLAIILWCVFSYIHNGYSPYICHSCYYADVHTVAIGAILN---LILYV 261

Query: 80  LD*LLMLK 57
           +D +L  K
Sbjct: 262 IDLVLTFK 269


>UniRef50_Q8IJJ6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 2111

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = +3

Query: 87  IKNIELIQNQSVI*ILNHSEITMKIK-NASNVMIS*TKYTQTNELNFKIQINYNIKNKLC 263
           I NI  ++ + +  ILN    +  IK N  N+        +TN     I++NY IK  LC
Sbjct: 453 INNIYRLKIKQICNILNFINSSYNIKLNYINIQTFLGLLNKTNNSTSFIKLNYYIKKMLC 512

Query: 264 PKQLSGLLSLHRRKKHIC 317
             ++   L+LH+ K   C
Sbjct: 513 QNKMI-KLNLHKCKYKRC 529


>UniRef50_Q4GZD7 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 132

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -3

Query: 215 FICLCVFGLRNHDIASIFYFHCYFRVV*YSNDGLILNQFYIFYFILD*LLM 63
           FICLC++      +A  F+ + Y +   +   G +    ++FYF+   LLM
Sbjct: 44  FICLCLYCGMEQRVAFSFFIYIYMKNKPFPLTGKVTLFAHLFYFLSHVLLM 94


>UniRef50_A0CJM8 Cluster: Chromosome undetermined scaffold_2, whole
           genome shotgun sequence; n=6; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_2,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1676

 Score = 30.7 bits (66), Expect = 6.5
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 201 TQTNELNFKIQINYNIKNKLCPKQLSGLLSLHRR 302
           +Q+ ++  KI  NYN + KL P ++    SLH+R
Sbjct: 345 SQSQKVQLKILANYNQEYKLLPIEIKAFESLHKR 378


>UniRef50_Q8ILJ1 Cluster: Putative uncharacterized protein; n=5;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 1477

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 22/62 (35%), Positives = 35/62 (56%)
 Frame = +3

Query: 84   EIKNIELIQNQSVI*ILNHSEITMKIKNASNVMIS*TKYTQTNELNFKIQINYNIKNKLC 263
            EI   +L + + VI +LN  EI  K +NA NV+I   +     E++ K+Q N N++N + 
Sbjct: 1181 EIYKQDLERYKDVINVLN-KEIEEK-QNAHNVLIQKIRKENEMEIDRKLQENNNLENIIS 1238

Query: 264  PK 269
             K
Sbjct: 1239 QK 1240


>UniRef50_Q7RE53 Cluster: Putative uncharacterized protein PY05215;
           n=4; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05215 - Plasmodium yoelii yoelii
          Length = 1242

 Score = 30.3 bits (65), Expect = 8.6
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
 Frame = +3

Query: 81  YEIKNIELIQNQSVI*ILNHSEITMKIKN---ASNVMIS*TKYTQTNELNFKIQINYNIK 251
           Y+ + I L+++ +   +LNH   T  I N    + + I  T   +    NF+I+ N  I 
Sbjct: 340 YQRRRINLLKDLTTKDLLNHENKTGIINNEKGVAQISIIDTSNKKAVLKNFRIKNNKEIM 399

Query: 252 NKLCPKQLSGLLSLHRRKKHI 314
           N    K+   +L   ++KK++
Sbjct: 400 NDEDEKKKKNILKFIKKKKNV 420


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,471,460
Number of Sequences: 1657284
Number of extensions: 4237541
Number of successful extensions: 9473
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9470
length of database: 575,637,011
effective HSP length: 84
effective length of database: 436,425,155
effective search space used: 10037778565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)