Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1747
         (480 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD...    29   2.5  
BT021390-1|AAX33538.1|  949|Drosophila melanogaster LD32282p pro...    29   4.4  
AY069406-1|AAL39551.1|  518|Drosophila melanogaster LD10565p pro...    29   4.4  
AF152865-1|AAD38975.1|  949|Drosophila melanogaster Suppressor o...    29   4.4  
AE014134-334|AAN10440.1|  949|Drosophila melanogaster CG4244-PC,...    29   4.4  
AE014134-333|AAF51312.1|  949|Drosophila melanogaster CG4244-PB,...    29   4.4  
AE014134-332|AAF51311.1|  949|Drosophila melanogaster CG4244-PA,...    29   4.4  
AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA ...    28   5.8  

>AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD,
           isoform D protein.
          Length = 1677

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
 Frame = +1

Query: 259 KINLK----IKMFQYEFEKRPASAHSCESQ---ATVSTDWSRSYVDRHHRMTSRPLPPRP 417
           K+N+K    I+M + + +K  A++ S ES    +++++ ++  Y +   R T   L P P
Sbjct: 2   KVNIKKCTHIQMGKQKPKKNEATSMSRESDDNLSSINSAYTDLYQETVRRFTRSSLSPTP 61

Query: 418 IHDRF-PANPTCPVEGGVR 471
             DRF PA  +   E G R
Sbjct: 62  DWDRFSPARRSLKSEAGSR 80


>BT021390-1|AAX33538.1|  949|Drosophila melanogaster LD32282p
           protein.
          Length = 949

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +1

Query: 235 QSIDTFIEKIN--LKIKMFQYEFEKRPASAHSCESQATVSTDWSRSYVDRHHRMTSR 399
           Q   TF+E  N  + ++  +Y F++R      C  Q     DW R+ + RH+   S+
Sbjct: 798 QQTKTFLEGFNEVVPLEWLKY-FDERELELILCGMQDVDVEDWQRNTIYRHYNRNSK 853


>AY069406-1|AAL39551.1|  518|Drosophila melanogaster LD10565p
           protein.
          Length = 518

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +1

Query: 235 QSIDTFIEKIN--LKIKMFQYEFEKRPASAHSCESQATVSTDWSRSYVDRHHRMTSR 399
           Q   TF+E  N  + ++  +Y F++R      C  Q     DW R+ + RH+   S+
Sbjct: 367 QQTKTFLEGFNEVVPLEWLKY-FDERELELILCGMQDVDVEDWQRNTIYRHYNRNSK 422


>AF152865-1|AAD38975.1|  949|Drosophila melanogaster Suppressor of
           deltex protein.
          Length = 949

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +1

Query: 235 QSIDTFIEKIN--LKIKMFQYEFEKRPASAHSCESQATVSTDWSRSYVDRHHRMTSR 399
           Q   TF+E  N  + ++  +Y F++R      C  Q     DW R+ + RH+   S+
Sbjct: 798 QQTKTFLEGFNEVVPLEWLKY-FDERELELILCGMQDVDVEDWQRNTIYRHYNRNSK 853


>AE014134-334|AAN10440.1|  949|Drosophila melanogaster CG4244-PC,
           isoform C protein.
          Length = 949

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +1

Query: 235 QSIDTFIEKIN--LKIKMFQYEFEKRPASAHSCESQATVSTDWSRSYVDRHHRMTSR 399
           Q   TF+E  N  + ++  +Y F++R      C  Q     DW R+ + RH+   S+
Sbjct: 798 QQTKTFLEGFNEVVPLEWLKY-FDERELELILCGMQDVDVEDWQRNTIYRHYNRNSK 853


>AE014134-333|AAF51312.1|  949|Drosophila melanogaster CG4244-PB,
           isoform B protein.
          Length = 949

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +1

Query: 235 QSIDTFIEKIN--LKIKMFQYEFEKRPASAHSCESQATVSTDWSRSYVDRHHRMTSR 399
           Q   TF+E  N  + ++  +Y F++R      C  Q     DW R+ + RH+   S+
Sbjct: 798 QQTKTFLEGFNEVVPLEWLKY-FDERELELILCGMQDVDVEDWQRNTIYRHYNRNSK 853


>AE014134-332|AAF51311.1|  949|Drosophila melanogaster CG4244-PA,
           isoform A protein.
          Length = 949

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +1

Query: 235 QSIDTFIEKIN--LKIKMFQYEFEKRPASAHSCESQATVSTDWSRSYVDRHHRMTSR 399
           Q   TF+E  N  + ++  +Y F++R      C  Q     DW R+ + RH+   S+
Sbjct: 798 QQTKTFLEGFNEVVPLEWLKY-FDERELELILCGMQDVDVEDWQRNTIYRHYNRNSK 853


>AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA
            protein.
          Length = 1929

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 313  SAHSCE-SQATVSTDWSRSYVDRHHRMTSRPLPPRPIHDRFPANPTCPVE 459
            SA++ E + A  S ++S +Y+D    + S P  P  +    P  P  PVE
Sbjct: 1476 SAYNMEQAYAQYSEEYSNTYMDYMVEVASSPQAPGSVLRELPMAPMMPVE 1525


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,619,504
Number of Sequences: 53049
Number of extensions: 362699
Number of successful extensions: 948
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)