Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1747
(480 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 28 4.0
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 4.0
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 27 5.3
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 27 5.3
Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical pr... 27 7.0
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 27 7.0
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 27 7.0
AF025451-10|AAB71207.1| 343|Caenorhabditis elegans Hypothetical... 27 9.3
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = -3
Query: 466 PPLQPDKSGWPGIYRE-SVAAVKVLMSFYDGDPHSFDSNQY*RW 338
PP +P WP + R SV + + F G PH++D N+ +W
Sbjct: 589 PPERPYV--WPTLRRAMSVEPSSMPVDFAPGVPHNYDDNEEYKW 630
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 27.9 bits (59), Expect = 4.0
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Frame = +1
Query: 358 SRSYVDRHHRMTSRPLPPRPIHDRFPAN-PTCP 453
SR HH RP PP H FP P CP
Sbjct: 411 SRHGHHHHHHHGCRPFPPHHGHHHFPPFWPPCP 443
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 352 DWSRSYVDRHHRMTSRPLPPRP--IHDRFPANPTCPVE 459
DWS R R+ S PLPP P + P +P V+
Sbjct: 1213 DWSNCNHKREERLESPPLPPPPPEVLSSPPKSPVASVQ 1250
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 352 DWSRSYVDRHHRMTSRPLPPRP--IHDRFPANPTCPVE 459
DWS R R+ S PLPP P + P +P V+
Sbjct: 1235 DWSNCNHKREERLESPPLPPPPPEVLSSPPKSPVASVQ 1272
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 352 DWSRSYVDRHHRMTSRPLPPRP--IHDRFPANPTCPVE 459
DWS R R+ S PLPP P + P +P V+
Sbjct: 1026 DWSNCNHKREERLESPPLPPPPPEVLSSPPKSPVASVQ 1063
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 352 DWSRSYVDRHHRMTSRPLPPRP--IHDRFPANPTCPVE 459
DWS R R+ S PLPP P + P +P V+
Sbjct: 1333 DWSNCNHKREERLESPPLPPPPPEVLSSPPKSPVASVQ 1370
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 352 DWSRSYVDRHHRMTSRPLPPRP--IHDRFPANPTCPVE 459
DWS R R+ S PLPP P + P +P V+
Sbjct: 1213 DWSNCNHKREERLESPPLPPPPPEVLSSPPKSPVASVQ 1250
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 352 DWSRSYVDRHHRMTSRPLPPRP--IHDRFPANPTCPVE 459
DWS R R+ S PLPP P + P +P V+
Sbjct: 1235 DWSNCNHKREERLESPPLPPPPPEVLSSPPKSPVASVQ 1272
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 352 DWSRSYVDRHHRMTSRPLPPRP--IHDRFPANPTCPVE 459
DWS R R+ S PLPP P + P +P V+
Sbjct: 1026 DWSNCNHKREERLESPPLPPPPPEVLSSPPKSPVASVQ 1063
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 352 DWSRSYVDRHHRMTSRPLPPRP--IHDRFPANPTCPVE 459
DWS R R+ S PLPP P + P +P V+
Sbjct: 1333 DWSNCNHKREERLESPPLPPPPPEVLSSPPKSPVASVQ 1370
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 352 DWSRSYVDRHHRMTSRPLPPRP--IHDRFPANPTCPVE 459
DWS R R+ S PLPP P + P +P V+
Sbjct: 1044 DWSNCNHKREERLESPPLPPPPPEVLSSPPKSPVASVQ 1081
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +1
Query: 352 DWSRSYVDRHHRMTSRPLPPRP--IHDRFPANPTCPVE 459
DWS R R+ S PLPP P + P +P V+
Sbjct: 1004 DWSNCNHKREERLESPPLPPPPPEVLSSPPKSPVASVQ 1041
>Z93779-1|CAB07849.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 363 STPISTDGGLALTRVCRCGSLLKF 292
STP+ +GG+ + VC C S+ +F
Sbjct: 1436 STPVCQNGGIEKSGVCDCSSVPQF 1459
>Z78543-7|CAB01757.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 363 STPISTDGGLALTRVCRCGSLLKF 292
STP+ +GG+ + VC C S+ +F
Sbjct: 1436 STPVCQNGGIEKSGVCDCSSVPQF 1459
>Z66566-5|CAA91487.2| 2103|Caenorhabditis elegans Hypothetical protein
T25C12.3 protein.
Length = 2103
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 363 STPISTDGGLALTRVCRCGSLLKF 292
STP+ +GG+ + VC C S+ +F
Sbjct: 1436 STPVCQNGGIEKSGVCDCSSVPQF 1459
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 201 VKTYRSELCYLTKHRYIHRENQLKD*NVSIRI*EETRIGTLV*EPGHRQY*LESKL 368
++ Y +CY TKH ++ + + L ++ I I E++ I LV G Y +SKL
Sbjct: 605 IRHYAGSVCYETKH-FVEKNDDLLHNSLQILI-EQSTIRLLVSLFGSTAYPTKSKL 658
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 27.1 bits (57), Expect = 7.0
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +3
Query: 201 VKTYRSELCYLTKHRYIHRENQLKD*NVSIRI*EETRIGTLV*EPGHRQY*LESKL 368
++ Y +CY TKH ++ + + L ++ I I E++ I LV G Y +SKL
Sbjct: 605 IRHYAGSVCYETKH-FVEKNDDLLHNSLQILI-EQSTIRLLVSLFGSTAYPTKSKL 658
>AF025451-10|AAB71207.1| 343|Caenorhabditis elegans Hypothetical
protein C24H12.11 protein.
Length = 343
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -1
Query: 300 LKFVLKHFNL*VDFLYECIYAL-LGNTIHFD--RFSLN 196
++F+LK+F+L FL C+Y + N + F+ R LN
Sbjct: 214 IEFILKNFDLKYGFLTRCLYKMEFNNKLLFNIPRLDLN 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,155,243
Number of Sequences: 27780
Number of extensions: 194548
Number of successful extensions: 534
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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