Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1746
         (334 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022552-1|AAY54968.1|  454|Drosophila melanogaster IP11878p pro...    27   7.8  
AE014297-299|AAS65099.1|  422|Drosophila melanogaster CG1427-PB,...    27   7.8  
AE014297-298|AAF51994.3|  448|Drosophila melanogaster CG1427-PA,...    27   7.8  

>BT022552-1|AAY54968.1|  454|Drosophila melanogaster IP11878p
           protein.
          Length = 454

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 311 RQLFKLLEKIFVPQNLWFDQRVPSFRHV 228
           R   +LLEK  +P+N W D+R+    H+
Sbjct: 6   RSFKELLEKRKLPKNGWSDERIEELVHM 33


>AE014297-299|AAS65099.1|  422|Drosophila melanogaster CG1427-PB,
           isoform B protein.
          Length = 422

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 311 RQLFKLLEKIFVPQNLWFDQRVPSFRHV 228
           R   +LLEK  +P+N W D+R+    H+
Sbjct: 30  RSFKELLEKRKLPKNGWSDERIEELVHM 57


>AE014297-298|AAF51994.3|  448|Drosophila melanogaster CG1427-PA,
           isoform A protein.
          Length = 448

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -3

Query: 311 RQLFKLLEKIFVPQNLWFDQRVPSFRHV 228
           R   +LLEK  +P+N W D+R+    H+
Sbjct: 30  RSFKELLEKRKLPKNGWSDERIEELVHM 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,372,121
Number of Sequences: 53049
Number of extensions: 266777
Number of successful extensions: 572
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)