Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1743
         (339 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         180   1e-47
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         180   1e-47
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         180   1e-47
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          171   8e-45
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    23   2.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   2.4  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   2.4  
AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450 CY...    23   3.1  
AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450 CY...    23   3.1  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    21   9.6  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           21   9.6  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           21   9.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    21   9.6  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  180 bits (438), Expect = 1e-47
 Identities = 82/83 (98%), Positives = 82/83 (98%)
 Frame = +3

Query: 90  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 269
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 270 SKRGILTLKYPIEHGIVTNWDDM 338
           SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDM 83


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  180 bits (438), Expect = 1e-47
 Identities = 82/83 (98%), Positives = 82/83 (98%)
 Frame = +3

Query: 90  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 269
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 270 SKRGILTLKYPIEHGIVTNWDDM 338
           SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDM 83


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  180 bits (438), Expect = 1e-47
 Identities = 82/83 (98%), Positives = 82/83 (98%)
 Frame = +3

Query: 90  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 269
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 270 SKRGILTLKYPIEHGIVTNWDDM 338
           SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDM 83


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  171 bits (415), Expect = 8e-45
 Identities = 75/83 (90%), Positives = 79/83 (95%)
 Frame = +3

Query: 90  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGVMVGMGQKDSYVGDEAQ 269
           MCD++  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG KD+YVGDEAQ
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60

Query: 270 SKRGILTLKYPIEHGIVTNWDDM 338
           SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61  SKRGILTLKYPIEHGIITNWDDM 83


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 84  FKMCDEEVAALVVDNGSGMC 143
           +++C E+ A   +DNG+ MC
Sbjct: 42  YRVCHEQHATPQMDNGTVMC 61


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -1

Query: 195 RSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 94
           + R TL E       +P  +R H LLP   +  R
Sbjct: 841 KRRPTLTESTSFELKKPKDFRKHSLLPLNNVFDR 874


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 258  LLHKSPSVPYRPSRHDGGAF 199
            LLH+  S  YR S H  GAF
Sbjct: 1122 LLHQQLSNAYRASGHINGAF 1141


>AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450
           CYP4C28 protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 272 QKRYPDPQIPHRTRNRH 322
           +K YPD  +P  + NRH
Sbjct: 117 EKFYPDRFLPENSTNRH 133


>AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450
           CYP4G17 protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 284 PDPQIPHRTRNRH 322
           PD  +P RT+NRH
Sbjct: 122 PDNFLPERTQNRH 134


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 140 HTGAIVYYQRGNF 102
           H GA+ Y+  GNF
Sbjct: 185 HDGALAYFGYGNF 197


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 262 SSPT*ESFCPIPTITP*WRGLP 197
           + PT  +  P PT T  W  LP
Sbjct: 190 TDPTATTTTPAPTTTTTWSDLP 211


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 262 SSPT*ESFCPIPTITP*WRGLP 197
           + PT  +  P PT T  W  LP
Sbjct: 190 TDPTATTTTPAPTTTTTWSDLP 211


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -2

Query: 266 CLISYIRVLLSHTDHHAMMAGPSHDRGK 183
           CL +  RV LSH      MA  +H   K
Sbjct: 377 CLAARERVQLSHDLEERSMAAAAHRTAK 404


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,088
Number of Sequences: 2352
Number of extensions: 8163
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 24206952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)