Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1742
         (451 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024266-1|ABC86328.1|   95|Drosophila melanogaster IP15731p pro...    28   6.7  
BT024245-1|ABC86307.1|  161|Drosophila melanogaster IP15931p pro...    28   6.7  
AE014296-404|AAN11510.1|  202|Drosophila melanogaster CG32308-PB...    28   6.7  
AE014296-403|AAN11509.1|  183|Drosophila melanogaster CG32308-PA...    28   6.7  

>BT024266-1|ABC86328.1|   95|Drosophila melanogaster IP15731p
           protein.
          Length = 95

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 164 NRWGKRVLEWRPRTGKRSAGRPQAR*NNDLCRVAFIYLL 48
           N+  K V +WR R+ KR   +P    NN     AFI  L
Sbjct: 11  NQKKKAVPKWRYRSRKRPMAKPTPNPNNPAMSTAFIGFL 49


>BT024245-1|ABC86307.1|  161|Drosophila melanogaster IP15931p
           protein.
          Length = 161

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 164 NRWGKRVLEWRPRTGKRSAGRPQAR*NNDLCRVAFIYLL 48
           N+  K V +WR R+ KR   +P    NN     AFI  L
Sbjct: 77  NQKKKAVPKWRYRSRKRPMAKPTPNPNNPAMSTAFIGFL 115


>AE014296-404|AAN11510.1|  202|Drosophila melanogaster CG32308-PB,
           isoform B protein.
          Length = 202

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 164 NRWGKRVLEWRPRTGKRSAGRPQAR*NNDLCRVAFIYLL 48
           N+  K V +WR R+ KR   +P    NN     AFI  L
Sbjct: 96  NQKKKAVPKWRYRSRKRPMAKPTPNPNNPAMSTAFIGFL 134


>AE014296-403|AAN11509.1|  183|Drosophila melanogaster CG32308-PA,
           isoform A protein.
          Length = 183

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -3

Query: 164 NRWGKRVLEWRPRTGKRSAGRPQAR*NNDLCRVAFIYLL 48
           N+  K V +WR R+ KR   +P    NN     AFI  L
Sbjct: 77  NQKKKAVPKWRYRSRKRPMAKPTPNPNNPAMSTAFIGFL 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,933,740
Number of Sequences: 53049
Number of extensions: 409896
Number of successful extensions: 791
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)