Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1739
         (703 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    24   1.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    22   5.6  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    22   5.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   9.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   9.7  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 6/25 (24%), Positives = 16/25 (64%)
 Frame = -3

Query: 212 YHVYITHISTRISRWMMVFTLFVSM 138
           YHV++T ++ +  +W  +F + + +
Sbjct: 81  YHVFVTMMTLKRHKWSTLFEILLKL 105


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 181 VSQGG*WCSPYL 146
           V+ G  WCSPY+
Sbjct: 482 VTDGNNWCSPYI 493


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 639 VSSHPNKTFGQFCV 680
           V SHPN T+ Q CV
Sbjct: 192 VESHPNITWYQQCV 205


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 639 VSSHPNKTFGQFCV 680
           V SHPN T+ Q CV
Sbjct: 192 VESHPNITWYQQCV 205


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 414  KIHKYRPFYIPTLVLCGFFLLKFCCKNTARSVV 316
            +I  +  FY   + +  F L+ F CK+  + +V
Sbjct: 940  QIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIV 972


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 414  KIHKYRPFYIPTLVLCGFFLLKFCCKNTARSVV 316
            +I  +  FY   + +  F L+ F CK+  + +V
Sbjct: 940  QIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIV 972


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 414  KIHKYRPFYIPTLVLCGFFLLKFCCKNTARSVV 316
            +I  +  FY   + +  F L+ F CK+  + +V
Sbjct: 940  QIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIV 972


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 414  KIHKYRPFYIPTLVLCGFFLLKFCCKNTARSVV 316
            +I  +  FY   + +  F L+ F CK+  + +V
Sbjct: 940  QIDNWTSFYYNIIPILFFMLVCFTCKSNIQLIV 972


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 404 LCILQYKHTKTYNKYI*RISGTVNVIVAVSIF 499
           LC L YK T    K     S  + V + VS+F
Sbjct: 233 LCRLHYKLTSVMQKINSAFSVQLLVSIGVSLF 264


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 404 LCILQYKHTKTYNKYI*RISGTVNVIVAVSIF 499
           LC L YK T    K     S  + V + VS+F
Sbjct: 233 LCRLHYKLTSVMQKINSAFSVQLLVSIGVSLF 264


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,740
Number of Sequences: 336
Number of extensions: 3679
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)