Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1739
         (703 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    29   0.11 
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    29   0.11 
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           25   3.0  

>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +3

Query: 162 HHPP*DTRRNVSYINVVSPLSQPSNRTACLAA--EVSSRWLHY 284
           HH        +SY N+ +P  +P     C +   EV++RW H+
Sbjct: 501 HHTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWHHF 543


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 29.5 bits (63), Expect = 0.11
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +3

Query: 162 HHPP*DTRRNVSYINVVSPLSQPSNRTACLAA--EVSSRWLHY 284
           HH        +SY N+ +P  +P     C +   EV++RW H+
Sbjct: 477 HHTHYQLHHQMSYHNMFTPSREPGTAWRCRSCGKEVTNRWHHF 519


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/39 (28%), Positives = 23/39 (58%)
 Frame = -2

Query: 246 KRFGSKVGTAVIPRLYNSHFDAYLKVDDGVHLICVYGLR 130
           + + +++  A +   +NSH+D +L  +D + LI +Y  R
Sbjct: 37  QEYTTEICKASLDPRWNSHYDLFLGKNDSI-LITIYNHR 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,579
Number of Sequences: 2352
Number of extensions: 15269
Number of successful extensions: 25
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)