Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1739
         (703 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of ...    29   8.1  
BT021939-1|AAX51644.1|  715|Drosophila melanogaster RE27718p pro...    29   8.1  
AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA...    29   8.1  

>X52187-1|CAA36434.1| 1169|Drosophila melanogaster suppressor of
           variegation protein3-7 protein.
          Length = 1169

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 598 PSQLRGKVFIWKIRFPAIPIK 660
           P+ ++GKV +WK RFP +  K
Sbjct: 625 PATMKGKVMVWKGRFPWLSYK 645


>BT021939-1|AAX51644.1|  715|Drosophila melanogaster RE27718p
           protein.
          Length = 715

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 598 PSQLRGKVFIWKIRFPAIPIK 660
           P+ ++GKV +WK RFP +  K
Sbjct: 171 PATMKGKVMVWKGRFPWLSYK 191


>AE014297-1644|AAF54918.2| 1250|Drosophila melanogaster CG8599-PA
           protein.
          Length = 1250

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 598 PSQLRGKVFIWKIRFPAIPIK 660
           P+ ++GKV +WK RFP +  K
Sbjct: 706 PATMKGKVMVWKGRFPWLSYK 726


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,996,613
Number of Sequences: 53049
Number of extensions: 607507
Number of successful extensions: 1105
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)