Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1732
         (445 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    26   0.14 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.7  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   5.2  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   5.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.2  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 26.2 bits (55), Expect = 0.14
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 197 YWCLFQMFSLIFLFYIATLKFNLLFFC 277
           +W      ++IFLF+I  L   L+ +C
Sbjct: 232 FWSALYFLTIIFLFFIIPLIILLILYC 258



 Score = 21.8 bits (44), Expect = 3.0
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = +2

Query: 257 FNLLFFCRFKIKVDS 301
           +N+L+FCR  + ++S
Sbjct: 330 YNILYFCRIMVYLNS 344


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +2

Query: 185 RYTLYWCLFQMFSLIFLFYIATLKF--NLLFFCRFKI 289
           R   ++C+   F++  LF + +  F  +LLF+C F I
Sbjct: 55  RIYYFYCVSITFNVHLLFLLCSGYFTVHLLFYCPFII 91



 Score = 21.8 bits (44), Expect = 3.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 197 YWCLFQMFSLIFLFYIATLKFNL 265
           ++C F +F++  LF  A + FN+
Sbjct: 169 FFCAFIIFTMHLLFCCAFIFFNM 191



 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/26 (26%), Positives = 15/26 (57%)
 Frame = +2

Query: 188 YTLYWCLFQMFSLIFLFYIATLKFNL 265
           + L++C+  +   I+ FY A + F +
Sbjct: 225 HLLFYCVLIILLCIYYFYYAFILFTV 250



 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +2

Query: 197 YWCLFQMFSLIFLFYIATLKFNLLFFCRFKI 289
           ++C   +   I+ F  A + F   F+C F +
Sbjct: 288 FYCALIILLCIYYFCRAFIIFPTHFYCAFSL 318


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 168 DRQRKIVIPYIGVYSKC 218
           DR   + IP++G+ + C
Sbjct: 81  DRVFTVAIPFVGIANSC 97


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 175 CRSYKSYTKSNLTM 134
           CR +K+Y K  LT+
Sbjct: 68  CRPFKAYIKDPLTL 81


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = -3

Query: 353 VNCNTTHYRANWDRAPPSSRPLF 285
           +N  T  +   W+R    + PLF
Sbjct: 703 INVMTYDFHGQWERTVGHNSPLF 725


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 215  FGINTNIRYNDFSLSV 168
            FG+ TNI Y++ +  V
Sbjct: 1299 FGVKTNITYDESTQEV 1314


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 215  FGINTNIRYNDFSLSV 168
            FG+ TNI Y++ +  V
Sbjct: 1299 FGVKTNITYDESTQEV 1314


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,465
Number of Sequences: 336
Number of extensions: 1857
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)