Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1732
         (445 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50797-4|CAA90674.1|  339|Caenorhabditis elegans Hypothetical pr...    32   0.16 
AC024757-1|AAF59450.3|  490|Caenorhabditis elegans Hypothetical ...    29   2.0  
AF063007-7|AAC16428.1|  659|Caenorhabditis elegans Hypothetical ...    28   2.7  
Z81556-7|CAB04519.1|  569|Caenorhabditis elegans Hypothetical pr...    28   3.5  
U80842-18|AAU20826.1|  132|Caenorhabditis elegans Hypothetical p...    27   6.1  

>Z50797-4|CAA90674.1|  339|Caenorhabditis elegans Hypothetical
           protein T22H6.3 protein.
          Length = 339

 Score = 32.3 bits (70), Expect = 0.16
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 197 YWCLFQMFSLIFLFYIATLKFNLLFFCRFK 286
           +W LFQ+F L     I T  F+++ FC FK
Sbjct: 195 HWNLFQLFGLAICCVIMTSCFSIIIFCGFK 224


>AC024757-1|AAF59450.3|  490|Caenorhabditis elegans Hypothetical
           protein Y37E11AL.5 protein.
          Length = 490

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 197 YWCLFQMFSLIFLFYIATLKFNLLF 271
           ++CLFQ F ++  F+ A+  F L F
Sbjct: 370 FFCLFQFFHVVIAFFFASYLFRLRF 394


>AF063007-7|AAC16428.1|  659|Caenorhabditis elegans Hypothetical
           protein R119.5 protein.
          Length = 659

 Score = 28.3 bits (60), Expect = 2.7
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 170 PTTKNRYTLYWCLFQMFSLIFLFYIATLKFNLLFFCRFKIK 292
           P T+NR      +F    L+F  ++  L+FN  F  + +IK
Sbjct: 405 PATENRAVQNLLIFFTLRLVFFRFLKILEFNNFFRLKLRIK 445


>Z81556-7|CAB04519.1|  569|Caenorhabditis elegans Hypothetical
           protein F58G1.7 protein.
          Length = 569

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +2

Query: 179 KNRYTL-YWCLFQMFSLIFLFYIATLKFNLL-FFCRFKIKVDS 301
           K R TL ++ +FQ+F  IF+F  AT+  N L   C+F +   S
Sbjct: 260 KLRLTLTFYGVFQLFISIFIFLSATIFLNFLREHCKFAMSFGS 302


>U80842-18|AAU20826.1|  132|Caenorhabditis elegans Hypothetical
           protein ZC239.17 protein.
          Length = 132

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 170 PTTKNRYTLYWCLFQMFSLIFLFYIATLK 256
           P TKN     + +F +  L+F++YI  LK
Sbjct: 90  PITKNNSYTRFFVFSLIFLVFVYYIPALK 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,369,400
Number of Sequences: 27780
Number of extensions: 168023
Number of successful extensions: 411
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 411
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)