Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1731
(633 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein. 44 3e-04
AK131330-1|BAD18490.1| 153|Homo sapiens protein ( Homo sapiens ... 40 0.010
AK000132-1|BAA90963.1| 392|Homo sapiens protein ( Homo sapiens ... 39 0.017
AF480924-3|AAM81188.1| 863|Homo sapiens pol protein protein. 38 0.039
AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein. 36 0.16
BC111742-1|AAI11743.1| 1325|Homo sapiens zinc finger protein 452... 32 1.9
BC111741-1|AAI11742.1| 1325|Homo sapiens zinc finger protein 452... 32 1.9
BC110834-1|AAI10835.1| 1325|Homo sapiens zinc finger protein 452... 32 1.9
AY517631-1|AAS01734.1| 1325|Homo sapiens zinc finger protein 452... 32 1.9
AL671879-1|CAI17641.2| 794|Homo sapiens zinc finger protein 452... 32 1.9
AK056369-1|BAB71166.1| 782|Homo sapiens protein ( Homo sapiens ... 32 1.9
AB067512-1|BAB67818.1| 1147|Homo sapiens KIAA1925 protein protein. 32 1.9
M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenou... 31 3.4
AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein. 31 3.4
AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein. 31 3.4
AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein. 31 3.4
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 31 3.4
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 31 3.4
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 31 3.4
AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein. 31 3.4
AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein. 31 3.4
AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein. 31 4.5
AK131226-1|BAD18411.1| 194|Homo sapiens protein ( Homo sapiens ... 30 5.9
BC108725-1|AAI08726.1| 544|Homo sapiens chromodomain protein, Y... 30 7.8
BC095409-1|AAH95409.1| 393|Homo sapiens chitinase domain contai... 30 7.8
BC061516-1|AAH61516.1| 346|Homo sapiens CDYL protein protein. 30 7.8
BC013642-1|AAH13642.1| 319|Homo sapiens CHID1 protein protein. 30 7.8
BC000001-1|AAH00001.1| 393|Homo sapiens CHID1 protein protein. 30 7.8
AL359643-1|CAH73737.1| 598|Homo sapiens chromodomain protein, Y... 30 7.8
AL356747-2|CAC36888.2| 598|Homo sapiens chromodomain protein, Y... 30 7.8
AL022725-1|CAI20892.1| 598|Homo sapiens chromodomain protein, Y... 30 7.8
AK075413-1|BAC11603.1| 418|Homo sapiens protein ( Homo sapiens ... 30 7.8
AK027711-1|BAB55316.1| 393|Homo sapiens protein ( Homo sapiens ... 30 7.8
AF212229-1|AAK14915.1| 393|Homo sapiens GL008 protein. 30 7.8
AF081259-1|AAD22735.1| 598|Homo sapiens testis-specific chromod... 30 7.8
AF081258-1|AAD22734.1| 598|Homo sapiens testis-specific chromod... 30 7.8
>AF499232-2|AAP29639.1| 1183|Homo sapiens pol protein protein.
Length = 1183
Score = 44.4 bits (100), Expect = 3e-04
Identities = 26/95 (27%), Positives = 46/95 (48%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSKLS 192
FG P +I SD AF + Q K G T +P+ +G+VE+++ I + K+
Sbjct: 951 FGLPLRIGSDNGPAFVADLVQKRAKVLGNTWKLHAAYRPQSSGKVEQMNWTIKNSKGKVC 1010
Query: 191 ADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLF 87
+ KW + + V + T + G +P+E+L+
Sbjct: 1011 QETGLKWIQALPMVLFKIRCTPSKRTGYSPYEILY 1045
>AK131330-1|BAD18490.1| 153|Homo sapiens protein ( Homo sapiens
cDNA FLJ16337 fis, clone TESTI1000266. ).
Length = 153
Score = 39.5 bits (88), Expect = 0.010
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G P KI ++ + A+ S+ FQ +C I H T P+G VE H + ++L K
Sbjct: 72 GQPTKIKTNNDLAYASSQFQQFCHMWNIQHSTGIPYNPQGQAIVECAHSTLKNMLKK 128
>AK000132-1|BAA90963.1| 392|Homo sapiens protein ( Homo sapiens
cDNA FLJ20125 fis, clone COL06152. ).
Length = 392
Score = 38.7 bits (86), Expect = 0.017
Identities = 28/98 (28%), Positives = 40/98 (40%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSKLS 192
+G PQKII D+ F + + GI I+ N +E I + LSK
Sbjct: 196 YGPPQKIIMDQRDEFIQQINIELYRLFGIKQIVISHTSGTVN-PMESTPNTIKAFLSKHC 254
Query: 191 ADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNS 78
AD P W +S V N T+ TP+ +F +
Sbjct: 255 ADHPNNWDDHLSAVSFAFNVTHLEPTKNTPYFQMFSRN 292
>AF480924-3|AAM81188.1| 863|Homo sapiens pol protein protein.
Length = 863
Score = 37.5 bits (83), Expect = 0.039
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
+G P I D ++A+TST F + KE I+H T P+G V H + +++ K
Sbjct: 697 WGVPHVIKMDNSSAYTSTRFAAFLKEFRISHITSIPYNPQGQAVVGHTHLYLKNLIIK 754
>AB037726-1|BAA92543.2| 1819|Homo sapiens KIAA1305 protein protein.
Length = 1819
Score = 35.5 bits (78), Expect = 0.16
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = -1
Query: 555 KGDVPLATYHIDHLGPLTSTHKNYKHILTVVDGFTKFTWIYPTENFVH 412
+ P + I+ +GP+T + + +KH+L V D T++ +P + + H
Sbjct: 1530 RSTAPWSNLQIEVVGPVTISEEGHKHVLIVADPNTRWVEAFPLKPYTH 1577
>BC111742-1|AAI11743.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 31.9 bits (69), Expect = 1.9
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTS---TNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G+P + SD F+S + + E I H T Q + + E+ + + S
Sbjct: 429 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSKTCQSQSSA--EQTEDIRKRIFSW 486
Query: 197 LSADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ ++ + W + +Q N Y RS+ TP E F + ++
Sbjct: 487 MQTNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAK 528
>BC111741-1|AAI11742.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 31.9 bits (69), Expect = 1.9
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTS---TNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G+P + SD F+S + + E I H T Q + + E+ + + S
Sbjct: 429 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSA--EQTEDIRKRIFSW 486
Query: 197 LSADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ ++ + W + +Q N Y RS+ TP E F + ++
Sbjct: 487 MQTNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAK 528
>BC110834-1|AAI10835.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 31.9 bits (69), Expect = 1.9
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTS---TNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G+P + SD F+S + + E I H T Q + + E+ + + S
Sbjct: 429 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSA--EQTEDIRKRIFSW 486
Query: 197 LSADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ ++ + W + +Q N Y RS+ TP E F + ++
Sbjct: 487 MQTNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAK 528
>AY517631-1|AAS01734.1| 1325|Homo sapiens zinc finger protein 452
protein.
Length = 1325
Score = 31.9 bits (69), Expect = 1.9
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTS---TNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G+P + SD F+S + + E I H T Q + + E+ + + S
Sbjct: 429 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSA--EQTEDIRKRIFSW 486
Query: 197 LSADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ ++ + W + +Q N Y RS+ TP E F + ++
Sbjct: 487 MQTNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAK 528
>AL671879-1|CAI17641.2| 794|Homo sapiens zinc finger protein 452
protein.
Length = 794
Score = 31.9 bits (69), Expect = 1.9
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTS---TNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G+P + SD F+S + + E I H T Q + + E+ + + S
Sbjct: 429 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSA--EQTEDIRKRIFSW 486
Query: 197 LSADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ ++ + W + +Q N Y RS+ TP E F + ++
Sbjct: 487 MQTNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAK 528
>AK056369-1|BAB71166.1| 782|Homo sapiens protein ( Homo sapiens
cDNA FLJ31807 fis, clone NT2RI2009215, moderately
similar to ZINC FINGER PROTEIN 165. ).
Length = 782
Score = 31.9 bits (69), Expect = 1.9
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTS---TNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G+P + SD F+S + + E I H T Q + + E+ + + S
Sbjct: 429 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSA--EQTEDIRKRIFSW 486
Query: 197 LSADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ ++ + W + +Q N Y RS+ TP E F + ++
Sbjct: 487 MQTNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAK 528
>AB067512-1|BAB67818.1| 1147|Homo sapiens KIAA1925 protein protein.
Length = 1147
Score = 31.9 bits (69), Expect = 1.9
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTS---TNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G+P + SD F+S + + E I H T Q + + E+ + + S
Sbjct: 251 GAPSVLQSDNGREFSSQVVSELSNIWPELKIVHGKSQTCQSQSSA--EQTEDIRKRIFSW 308
Query: 197 LSADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ ++ + W + +Q N Y RS+ TP E F + ++
Sbjct: 309 MQTNNSSHWTEFLWFIQMSQNQPYHRSMQQTPCESAFSSEAK 350
>M14123-4|AAA88033.1| 1361|Homo sapiens protein ( Human endogenous
retrovirus HERV-K10. ).
Length = 1361
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G P+KI +D + S FQ + + I+H T +G VER ++ + + L K
Sbjct: 604 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 660
>AY186778-1|AAO27434.1| 727|Homo sapiens polymerase protein.
Length = 727
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G P+KI +D + S FQ + + I+H T +G VER ++ + + L K
Sbjct: 565 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 621
>AF298588-1|AAK11554.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G P+KI +D + S FQ + + I+H T +G VER ++ + + L K
Sbjct: 702 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 758
>AF298587-1|AAK11553.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G P+KI +D + S FQ + + I+H T +G VER ++ + + L K
Sbjct: 702 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 758
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1879
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G P+KI +D + S FQ + + I+H T +G VER ++ + + L K
Sbjct: 1625 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 1681
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein protein.
Length = 1755
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G P+KI +D + S FQ + + I+H T +G VER ++ + + L K
Sbjct: 1627 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 1683
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G P+KI +D + S FQ + + I+H T +G VER ++ + + L K
Sbjct: 1625 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 1681
>AF074086-7|AAD21097.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G P+KI +D + S FQ + + I+H T +G VER ++ + + L K
Sbjct: 702 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 758
>AF074086-3|AAF88167.1| 956|Homo sapiens polymerase protein.
Length = 956
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G P+KI +D + S FQ + + I+H T +G VER ++ + + L K
Sbjct: 702 GVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 758
>AF333072-2|AAL60056.1| 702|Homo sapiens pol protein protein.
Length = 702
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -2
Query: 368 GSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSK 198
G P+KI +D + S FQ + + I+H T +G VER ++ + + L K
Sbjct: 592 GVPKKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVK 648
>AK131226-1|BAD18411.1| 194|Homo sapiens protein ( Homo sapiens
cDNA FLJ16127 fis, clone BRACE2037299. ).
Length = 194
Score = 30.3 bits (65), Expect = 5.9
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -2
Query: 257 PRGNGQVERIHQVIISVLSKLSADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFG 84
P G+VER + ++ + L+KLS W + + + Q + G +PFEL +G
Sbjct: 29 PSSLGKVERTNGLLKTHLTKLSLQLKKDWTALLPFALLRIRAYPQEATGYSPFELSYG 86
>BC108725-1|AAI08726.1| 544|Homo sapiens chromodomain protein,
Y-like protein.
Length = 544
Score = 29.9 bits (64), Expect = 7.8
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = -2
Query: 464 WMDLLNSPGSTLRKTLSTEETLDKLRIQQQTFGSP--QKIISDRNAAFTSTNFQDYC--K 297
+MD L + G+T +T T T K + P +++ ++ ++D K
Sbjct: 235 FMDALTANGTTNIQTSVTGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRK 294
Query: 296 EEGITHYTITTGQPRGNGQVERIHQVIISVLSKLSADD 183
++G TH ++T N + + + S LS +ADD
Sbjct: 295 QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD 332
>BC095409-1|AAH95409.1| 393|Homo sapiens chitinase domain
containing 1 protein.
Length = 393
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 543 PLATYHIDHLGPLTSTHKNYKHILTVVDGFTKFTWIYPT 427
P T D LG T HK ++ + V+DGF+ T+ Y T
Sbjct: 229 PAITPGTDQLGMFT--HKEFEQLAPVLDGFSLMTYDYST 265
>BC061516-1|AAH61516.1| 346|Homo sapiens CDYL protein protein.
Length = 346
Score = 29.9 bits (64), Expect = 7.8
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = -2
Query: 464 WMDLLNSPGSTLRKTLSTEETLDKLRIQQQTFGSP--QKIISDRNAAFTSTNFQDYC--K 297
+MD L + G+T +T T T K + P +++ ++ ++D K
Sbjct: 37 FMDALTANGTTNIQTSVTGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRK 96
Query: 296 EEGITHYTITTGQPRGNGQVERIHQVIISVLSKLSADD 183
++G TH ++T N + + + S LS +ADD
Sbjct: 97 QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD 134
>BC013642-1|AAH13642.1| 319|Homo sapiens CHID1 protein protein.
Length = 319
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 543 PLATYHIDHLGPLTSTHKNYKHILTVVDGFTKFTWIYPT 427
P T D LG T HK ++ + V+DGF+ T+ Y T
Sbjct: 155 PAITPGTDQLGMFT--HKEFEQLAPVLDGFSLMTYDYST 191
>BC000001-1|AAH00001.1| 393|Homo sapiens CHID1 protein protein.
Length = 393
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 543 PLATYHIDHLGPLTSTHKNYKHILTVVDGFTKFTWIYPT 427
P T D LG T HK ++ + V+DGF+ T+ Y T
Sbjct: 229 PAITPGTDQLGMFT--HKEFEQLAPVLDGFSLMTYDYST 265
>AL359643-1|CAH73737.1| 598|Homo sapiens chromodomain protein,
Y-like protein.
Length = 598
Score = 29.9 bits (64), Expect = 7.8
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = -2
Query: 464 WMDLLNSPGSTLRKTLSTEETLDKLRIQQQTFGSP--QKIISDRNAAFTSTNFQDYC--K 297
+MD L + G+T +T T T K + P +++ ++ ++D K
Sbjct: 289 FMDALTANGTTNIQTSVTGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRK 348
Query: 296 EEGITHYTITTGQPRGNGQVERIHQVIISVLSKLSADD 183
++G TH ++T N + + + S LS +ADD
Sbjct: 349 QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD 386
>AL356747-2|CAC36888.2| 598|Homo sapiens chromodomain protein,
Y-like protein.
Length = 598
Score = 29.9 bits (64), Expect = 7.8
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = -2
Query: 464 WMDLLNSPGSTLRKTLSTEETLDKLRIQQQTFGSP--QKIISDRNAAFTSTNFQDYC--K 297
+MD L + G+T +T T T K + P +++ ++ ++D K
Sbjct: 289 FMDALTANGTTNIQTSVTGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRK 348
Query: 296 EEGITHYTITTGQPRGNGQVERIHQVIISVLSKLSADD 183
++G TH ++T N + + + S LS +ADD
Sbjct: 349 QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD 386
>AL022725-1|CAI20892.1| 598|Homo sapiens chromodomain protein,
Y-like protein.
Length = 598
Score = 29.9 bits (64), Expect = 7.8
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = -2
Query: 464 WMDLLNSPGSTLRKTLSTEETLDKLRIQQQTFGSP--QKIISDRNAAFTSTNFQDYC--K 297
+MD L + G+T +T T T K + P +++ ++ ++D K
Sbjct: 289 FMDALTANGTTNIQTSVTGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRK 348
Query: 296 EEGITHYTITTGQPRGNGQVERIHQVIISVLSKLSADD 183
++G TH ++T N + + + S LS +ADD
Sbjct: 349 QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD 386
>AK075413-1|BAC11603.1| 418|Homo sapiens protein ( Homo sapiens
cDNA PSEC0104 fis, clone NT2RP2004795. ).
Length = 418
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 543 PLATYHIDHLGPLTSTHKNYKHILTVVDGFTKFTWIYPT 427
P T D LG T HK ++ + V+DGF+ T+ Y T
Sbjct: 254 PAITPGTDQLGMFT--HKEFEQLAPVLDGFSLMTYDYST 290
>AK027711-1|BAB55316.1| 393|Homo sapiens protein ( Homo sapiens
cDNA FLJ14805 fis, clone NT2RP4001739. ).
Length = 393
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 543 PLATYHIDHLGPLTSTHKNYKHILTVVDGFTKFTWIYPT 427
P T D LG T HK ++ + V+DGF+ T+ Y T
Sbjct: 229 PAITPGTDQLGMFT--HKEFEQLAPVLDGFSLMTYDYST 265
>AF212229-1|AAK14915.1| 393|Homo sapiens GL008 protein.
Length = 393
Score = 29.9 bits (64), Expect = 7.8
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -1
Query: 543 PLATYHIDHLGPLTSTHKNYKHILTVVDGFTKFTWIYPT 427
P T D LG T HK ++ + V+DGF+ T+ Y T
Sbjct: 229 PAITPGTDQLGMFT--HKEFEQLAPVLDGFSLMTYDYST 265
>AF081259-1|AAD22735.1| 598|Homo sapiens testis-specific
chromodomain Y-like protein protein.
Length = 598
Score = 29.9 bits (64), Expect = 7.8
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = -2
Query: 464 WMDLLNSPGSTLRKTLSTEETLDKLRIQQQTFGSP--QKIISDRNAAFTSTNFQDYC--K 297
+MD L + G+T +T T T K + P +++ ++ ++D K
Sbjct: 289 FMDALTANGTTNIQTSVTGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRK 348
Query: 296 EEGITHYTITTGQPRGNGQVERIHQVIISVLSKLSADD 183
++G TH ++T N + + + S LS +ADD
Sbjct: 349 QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD 386
>AF081258-1|AAD22734.1| 598|Homo sapiens testis-specific
chromodomain Y-like protein protein.
Length = 598
Score = 29.9 bits (64), Expect = 7.8
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = -2
Query: 464 WMDLLNSPGSTLRKTLSTEETLDKLRIQQQTFGSP--QKIISDRNAAFTSTNFQDYC--K 297
+MD L + G+T +T T T K + P +++ ++ ++D K
Sbjct: 289 FMDALTANGTTNIQTSVTGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRK 348
Query: 296 EEGITHYTITTGQPRGNGQVERIHQVIISVLSKLSADD 183
++G TH ++T N + + + S LS +ADD
Sbjct: 349 QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD 386
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,135,786
Number of Sequences: 237096
Number of extensions: 1972856
Number of successful extensions: 8000
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 7918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7999
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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