Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1731
(633 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 111 6e-25
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 109 4e-24
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 85 6e-17
AE014135-102|AAF59331.1| 131|Drosophila melanogaster CG11260-PA... 60 2e-09
AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p pro... 47 2e-05
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 47 2e-05
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 47 2e-05
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 46 3e-05
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 46 3e-05
AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p pro... 46 3e-05
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 44 2e-04
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 44 2e-04
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 41 0.001
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 38 0.011
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 37 0.020
AY058502-1|AAL13731.1| 280|Drosophila melanogaster LD21171p pro... 37 0.020
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 36 0.034
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 36 0.060
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 36 0.060
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 35 0.080
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 33 0.24
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 33 0.42
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 32 0.74
AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p pro... 30 2.3
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 29 5.2
BT023946-1|ABB36450.1| 2106|Drosophila melanogaster LD32003p pro... 29 5.2
BT023795-1|AAZ41804.1| 2154|Drosophila melanogaster GH08786p pro... 29 5.2
AE014297-689|AAF54180.1| 2117|Drosophila melanogaster CG2747-PB,... 29 5.2
AE014297-688|AAG22133.2| 2165|Drosophila melanogaster CG2747-PA,... 29 5.2
BT024407-1|ABC86469.1| 307|Drosophila melanogaster IP04017p pro... 28 9.1
AE014134-1648|AAS64665.1| 1136|Drosophila melanogaster CG3811-PD... 28 9.1
AE014134-1647|AAS64664.1| 1197|Drosophila melanogaster CG3811-PC... 28 9.1
AE014134-1646|AAN10695.1| 1197|Drosophila melanogaster CG3811-PB... 28 9.1
AE014134-1645|AAF52781.2| 1197|Drosophila melanogaster CG3811-PA... 28 9.1
AE013599-2594|ABC66052.1| 394|Drosophila melanogaster CG33996-P... 28 9.1
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 111 bits (268), Expect = 6e-25
Identities = 46/120 (38%), Positives = 77/120 (64%)
Frame = -2
Query: 425 KTLSTEETLDKLRIQQQTFGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGN 246
K+ EE + +L FG P++I+SD+ AFTS F+ + + H TTG RGN
Sbjct: 1076 KSTGQEEVVKRLTDWSNIFGFPKRIVSDKGTAFTSGAFEQFMSSHNVEHVCTTTGVARGN 1135
Query: 245 GQVERIHQVIISVLSKLSADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSRDR 66
GQ+ER++++I++++SKLS+D+P+KWY+ + VQ+ +N S+ ++PFE++FG R
Sbjct: 1136 GQIERVNRLILAIISKLSSDEPSKWYKYVPEVQKAINCHVHSSLKLSPFEVMFGTKMYTR 1195
Score = 84.2 bits (199), Expect = 1e-16
Identities = 35/71 (49%), Positives = 50/71 (70%)
Frame = -1
Query: 633 VIDICVECILIWHKKEKKRDTLHPLDKGDVPLATYHIDHLGPLTSTHKNYKHILTVVDGF 454
+I C++CI+ K K+ L+ +DKGD PL T HIDHLGP+ S+ K YK+IL VD F
Sbjct: 1007 LISNCIKCIIHSKKLGKQEGYLNCIDKGDAPLHTLHIDHLGPMDSSAKQYKYILATVDAF 1066
Query: 453 TKFTWIYPTEN 421
+KF W++PT++
Sbjct: 1067 SKFVWLFPTKS 1077
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p protein.
Length = 1026
Score = 109 bits (261), Expect = 4e-24
Identities = 45/120 (37%), Positives = 76/120 (63%)
Frame = -2
Query: 425 KTLSTEETLDKLRIQQQTFGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGN 246
K+ EE + +L FG P++I+SD+ AFTS F+ + + H TTG RGN
Sbjct: 769 KSTGQEEVVKRLTDWSNIFGFPKRIVSDKGTAFTSGAFEQFMSSHNVEHVCTTTGVARGN 828
Query: 245 GQVERIHQVIISVLSKLSADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSRDR 66
GQ+ER++++ ++++SKLS+D+P+KWY+ + VQ+ +N S+ ++PFE++FG R
Sbjct: 829 GQIERVNRLNLAIISKLSSDEPSKWYKYVPEVQKAINCHVHSSLKLSPFEVMFGTKMYTR 888
Score = 84.2 bits (199), Expect = 1e-16
Identities = 35/71 (49%), Positives = 50/71 (70%)
Frame = -1
Query: 633 VIDICVECILIWHKKEKKRDTLHPLDKGDVPLATYHIDHLGPLTSTHKNYKHILTVVDGF 454
+I C++CI+ K K+ L+ +DKGD PL T HIDHLGP+ S+ K YK+IL VD F
Sbjct: 700 LISNCIKCIIHSKKLGKQEGYLNCIDKGDAPLHTLHIDHLGPMDSSAKQYKYILATVDAF 759
Query: 453 TKFTWIYPTEN 421
+KF W++PT++
Sbjct: 760 SKFVWLFPTKS 770
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 85.4 bits (202), Expect = 6e-17
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Frame = -2
Query: 425 KTLSTEETLDKLRIQQQTFGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGN 246
KT +T+E + L + + P+ IISDR A FTS +F + KE + H I TG P+ N
Sbjct: 1305 KTTNTKEVIQSLNDYFRAYSRPKCIISDRGACFTSGDFDSFLKECNVKHIKIATGSPQAN 1364
Query: 245 GQVERIHQVIISVLSKL-SADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFG 84
GQVERI++ + ++SKL D W + V+ LN+T RSI P +LFG
Sbjct: 1365 GQVERINRSLGPMISKLIEPDQGLHWDLVLEKVEYTLNNTLHRSIKQYPSIMLFG 1419
Score = 59.3 bits (137), Expect = 4e-09
Identities = 29/69 (42%), Positives = 37/69 (53%)
Frame = -1
Query: 630 IDICVECILIWHKKEKKRDTLHPLDKGDVPLATYHIDHLGPLTSTHKNYKHILTVVDGFT 451
I C++CI K K LH + KG+ P HIDH GP+ KHIL +VD FT
Sbjct: 1238 ISNCLKCISFSPKTGKTEGFLHNIPKGNKPFEIIHIDHYGPVDLARPK-KHILVIVDAFT 1296
Query: 450 KFTWIYPTE 424
KF +Y T+
Sbjct: 1297 KFVRLYATK 1305
>AE014135-102|AAF59331.1| 131|Drosophila melanogaster CG11260-PA
protein.
Length = 131
Score = 60.5 bits (140), Expect = 2e-09
Identities = 30/74 (40%), Positives = 44/74 (59%)
Frame = -2
Query: 425 KTLSTEETLDKLRIQQQTFGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGN 246
++ EE L+ + Q FG P +I+SDR AAFTS F++Y ++ I H I TG P GN
Sbjct: 33 RSTGVEEVLNCIERQALNFGKPFRIVSDRGAAFTSHLFKEYYEKHQIRHLLIPTGVPLGN 92
Query: 245 GQVERIHQVIISVL 204
G+ E Q +++ L
Sbjct: 93 GRNEEEKQFMVNDL 106
Score = 29.1 bits (62), Expect = 5.2
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 477 ILTVVDGFTKFTWIYPTEN 421
I +VD F+K+ W YPT +
Sbjct: 16 IAVIVDAFSKYVWFYPTRS 34
>AY089684-1|AAL90422.1| 370|Drosophila melanogaster RH61266p
protein.
Length = 370
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/100 (28%), Positives = 41/100 (41%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSKLS 192
+G + ISD + + QD CK I + T T + G +ER H+ +
Sbjct: 155 YGPMKTFISDMGTEYKNNVIQDMCKYMKIENLTSTAYHHQTLGTIERSHRTFNEYIRSYI 214
Query: 191 ADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ D T W I C N+T P+EL+FG R
Sbjct: 215 SADKTDWDVWIQYFTYCFNTTPSVMHNYCPYELVFGRLPR 254
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = -1
Query: 597 HKKEKKRDTLH---PLDKGDVPLATYHI---DHLGPLTSTHKNYKHILTVVDGFTKFTWI 436
HK + + T H PL + P + I D +GPL + ++I+T++ TK+
Sbjct: 73 HKCQMSKTTTHTKTPLTYTETPTNAFDIVIVDTVGPLPKSEYGNEYIVTLICDLTKYLVT 132
Query: 435 YPTEN 421
P N
Sbjct: 133 IPVAN 137
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/100 (28%), Positives = 41/100 (41%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSKLS 192
+G + ISD + + QD CK I + T T + G +ER H+ +
Sbjct: 611 YGPMKTFISDMGTEYKNNVIQDMCKYMKIENLTSTAYHHQTLGTIERSHRTFNEYIRSYI 670
Query: 191 ADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ D T W I C N+T P+EL+FG R
Sbjct: 671 SADKTDWDVWIQYFTYCFNTTPSVMHNYCPYELVFGRLPR 710
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = -1
Query: 597 HKKEKKRDTLH---PLDKGDVPLATYHI---DHLGPLTSTHKNYKHILTVVDGFTKFTWI 436
HK + + T H PL + P + I D +GPL + ++I+T++ TK+
Sbjct: 529 HKCQMSKTTTHTKTPLTYTETPTNAFDIVIVDTVGPLPKSEYGNEYIVTLICDLTKYLVT 588
Query: 435 YPTEN 421
P N
Sbjct: 589 IPVAN 593
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 47.2 bits (107), Expect = 2e-05
Identities = 28/100 (28%), Positives = 41/100 (41%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSKLS 192
+G + ISD + + QD CK I + T T + G +ER H+ +
Sbjct: 611 YGPMKTFISDMGTEYKNNVIQDMCKYMKIENLTSTAYHHQTLGTIERSHRTFNEYIRSYI 670
Query: 191 ADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ D T W I C N+T P+EL+FG R
Sbjct: 671 SADKTDWDVWIQYFTYCFNTTPSVMHNYCPYELVFGRLPR 710
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Frame = -1
Query: 597 HKKEKKRDTLH---PLDKGDVPLATYHI---DHLGPLTSTHKNYKHILTVVDGFTKFTWI 436
HK + + T H PL + P + I D +GPL + ++I+T++ TK+
Sbjct: 529 HKCQMSKTTTHTKTPLTYTETPTNAFDIVIVDTVGPLPKSEYGNEYIVTLICDLTKYLVT 588
Query: 435 YPTEN 421
P N
Sbjct: 589 IPVAN 593
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/99 (26%), Positives = 43/99 (43%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSKLS 192
+G + I+D + ++ D CK I + T T + G VER H+ + +
Sbjct: 1022 YGPMKTFITDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYI 1081
Query: 191 ADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSS 75
+ D T W + C N+T P+EL+FG +S
Sbjct: 1082 STDKTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGRTS 1120
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent DNA
polymerase protein.
Length = 1000
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/99 (26%), Positives = 43/99 (43%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSKLS 192
+G + I+D + ++ D CK I + T T + G VER H+ + +
Sbjct: 785 YGPMKTFITDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYI 844
Query: 191 ADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSS 75
+ D T W + C N+T P+EL+FG +S
Sbjct: 845 STDKTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGRTS 883
>AY095181-1|AAM12274.1| 320|Drosophila melanogaster GM07634p
protein.
Length = 320
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/99 (26%), Positives = 43/99 (43%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSKLS 192
+G + I+D + ++ D CK I + T T + G VER H+ + +
Sbjct: 173 YGPMKTFITDMGTEYKNSIITDLCKYLKIKNITSTAHHHQTVGVVERSHRTLNEYIRSYI 232
Query: 191 ADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSS 75
+ D T W + C N+T P+EL+FG +S
Sbjct: 233 STDKTDWDVWLQYFVYCFNTTQSMVHNYCPYELVFGRTS 271
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 44.0 bits (99), Expect = 2e-04
Identities = 27/100 (27%), Positives = 41/100 (41%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSKLS 192
+G + II+D + + D CK I + T T + G +ER H+ +
Sbjct: 409 YGPMKTIITDMGTEYKNQIIDDLCKYMKIKNITSTAHHHQTLGTIERSHRTFNEYVRSYI 468
Query: 191 ADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ D T W I C N+T P+EL+FG R
Sbjct: 469 SVDKTDWDIWIQYFTYCFNTTPSVVHDYCPYELVFGRLPR 508
Score = 28.7 bits (61), Expect = 6.9
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -1
Query: 630 IDICVECILIWHKKEKKRDTLHPLDKGDVPLATYHI---DHLGPLTSTHKNYKHILTVVD 460
++ C++C + + + T PL + P + I D +GPL + ++ +T++
Sbjct: 323 VETCLKC----QQSKTTKHTKTPLTITETPATAFDIVLIDTIGPLPRSENGNEYAVTIIC 378
Query: 459 GFTKFTWIYPTEN 421
TK+ P N
Sbjct: 379 DLTKYLVTVPIPN 391
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 43.6 bits (98), Expect = 2e-04
Identities = 18/64 (28%), Positives = 32/64 (50%)
Frame = -1
Query: 621 CVECILIWHKKEKKRDTLHPLDKGDVPLATYHIDHLGPLTSTHKNYKHILTVVDGFTKFT 442
C+ C + K + LH + K +P T HID G L+ ++++ +D +TKF
Sbjct: 990 CITCRSVKSSSGKVQAELHSIPKTSIPWHTIHIDITGKLSGKSDLKEYVIVQIDAYTKFV 1049
Query: 441 WIYP 430
++ P
Sbjct: 1050 YLLP 1053
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 41.1 bits (92), Expect = 0.001
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVL---- 204
FG P+K+I D+ F + F+ +C + I + + Q N VER+H + +
Sbjct: 977 FGLPKKLIHDQGVEFCNDIFRKFCSQYNILLHVTSFQQSSSNSPVERLHSSLTEIYRIIL 1036
Query: 203 -SKLSADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNS 78
++ PT +S N+ + TPFEL G +
Sbjct: 1037 DTRKKHKLPTDHEEIMSETVITYNNAIHSTTKHTPFELFNGRT 1079
Score = 32.3 bits (70), Expect = 0.56
Identities = 19/79 (24%), Positives = 37/79 (46%)
Frame = -1
Query: 621 CVECILIWHKKEKKRDTLHPLDKGDVPLATYHIDHLGPLTSTHKNYKHILTVVDGFTKFT 442
C C+ + + ++ + + PL HID + + + N+ LT++D F+KF
Sbjct: 900 CETCLKLKYDRQPQNIVFETPETPSKPLDIIHID----IYTINNNFN--LTIIDKFSKFA 953
Query: 441 WIYPTENFVHRRDVR*VKN 385
+YP N ++ +KN
Sbjct: 954 AVYPIPNRNGINCIKAIKN 972
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 37.9 bits (84), Expect = 0.011
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = -2
Query: 401 LDKLRIQQQTFGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQ 222
L+ ++++ Q G P+KI++D F + + E I + T + GN VER+H
Sbjct: 841 LNAIKLRIQYLGKPKKIVTDNE--FDIVVIKQFLLENNIDIHFTTPYKKTGNSDVERLH- 897
Query: 221 VIISVLSKLSADDPTKWYRRISGVQR---CLNSTYQRSIGMTPFELLFGN 81
+ ++ +L DP + V + C N+T + + P + LF N
Sbjct: 898 LTLNEHMRLYNADPNNFDTIQENVYKAIVCYNNTIHSTTNIRPID-LFNN 946
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 37.1 bits (82), Expect = 0.020
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSKLS 192
F +P+ ++SD +Y + I Y T + NGQVER H + + L
Sbjct: 812 FTAPKVLVSDNERGLLCPTVLNYLRSLDIDLYYAPTQKSEVNGQVERFHSTFLEIYRCLK 871
Query: 191 ADDPT-KWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ PT K + N++ P ++ F SSR
Sbjct: 872 DELPTFKPVELVHIAVDRYNTSVHSVTNRKPADVFFDRSSR 912
>AY058502-1|AAL13731.1| 280|Drosophila melanogaster LD21171p
protein.
Length = 280
Score = 37.1 bits (82), Expect = 0.020
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSKLS 192
F +P+ ++SD +Y + I Y T + NGQVER H + + L
Sbjct: 89 FTAPKVLVSDNERGLLCPTVLNYLRSLDIDLYYAPTQKSEVNGQVERFHSTFLEIYRCLK 148
Query: 191 ADDPT-KWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ PT K + N++ P ++ F SSR
Sbjct: 149 DELPTFKPVELVHIAVDRYNTSVHSVTNRKPADVFFDRSSR 189
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 36.3 bits (80), Expect = 0.034
Identities = 21/100 (21%), Positives = 42/100 (42%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVIISVLSKLS 192
+G + I+D+ + ++ + CK I + T + + G +ER H+ +
Sbjct: 780 YGPMKTFITDQGTEYKNSLMNELCKYMHIENLTSSAHHHQTLGTIERSHRTFNEYIRSYI 839
Query: 191 ADDPTKWYRRISGVQRCLNSTYQRSIGMTPFELLFGNSSR 72
+ + + W + C N+T P+EL+FG R
Sbjct: 840 SVNKSDWDIWLPYFTYCFNTTPSIVHDYCPYELVFGRLPR 879
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -1
Query: 534 TYHIDHLGPLTSTHKNYKHILTVVDGFTKFTWIYPTEN 421
T ID +GPL + ++ +T++ TKF PT N
Sbjct: 725 TVLIDTIGPLPKSEDGNEYAVTIICDLTKFLVTIPTPN 762
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 35.5 bits (78), Expect = 0.060
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = -1
Query: 621 CVECILIWHKKEKKRDTLHPLDKGDVPLATYHIDHLGPLTSTHKNYKHILTVVDGFTKFT 442
C C+ + + ++ ++ T + PL HID + + +KNY LT++D F+KF
Sbjct: 789 CETCLKLKYDRQPQKITYQISELPSKPLDILHID----IYTINKNYN--LTIIDKFSKFA 842
Query: 441 WIYPTEN 421
YP N
Sbjct: 843 AAYPITN 849
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 35.5 bits (78), Expect = 0.060
Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
Frame = -2
Query: 425 KTLSTEETLDKLRIQQQTFGSPQKIISDRNAAFTSTNFQDYCKEE-GITHYTITTGQPRG 249
K+ + E+ LR +G P+ I+ D + S + + ++ GI Y +
Sbjct: 852 KSKAVEDIRKALRDIVFYYGVPKLIVMDNEKSLNSASIKFMLTDQLGIELYKAPPYKSTV 911
Query: 248 NGQVERIHQVIISVLSKLSADDPTKWYRRISGVQRCL---NSTYQRSIGMTPFELLFG 84
NGQ+ER H + ++ L D + + + + R + N T P E+ FG
Sbjct: 912 NGQIERFHSTLSEIMRCLKGDGTHRGFEEL--LDRAIYEYNYTVHSVTKKRPLEVFFG 967
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 35.1 bits (77), Expect = 0.080
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = -2
Query: 470 LSWMDLLNSPGSTLRKTLSTEETLDKLRIQQQTF---GSPQKIISDRNAAFTSTNFQDYC 300
LS +D+ + S + L + + L+ R + F G PQ+I +D+++AF Q++
Sbjct: 915 LSCIDIYSKFASLVE--LKSRDWLEAKRAITKIFNDMGKPQEIKADKDSAFMCLALQNWL 972
Query: 299 KEEGITHYTITTGQPRGNGQVERIHQVI 216
+ EG+ +I+T + G +ER H+ +
Sbjct: 973 RSEGV-QISISTSK-NGISDIERFHKTV 998
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 33.5 bits (73), Expect = 0.24
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Frame = -2
Query: 392 LRIQQQTFGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVII 213
+RI Q G P+ + +DR+ AF+S + + + E + TT G +ER+H+ I
Sbjct: 864 MRIFNQ-LGKPKLLKADRDGAFSSLALKRWLESEEVELQLNTT--KTGVADIERLHKTIN 920
Query: 212 SVLS--KLSADDPTKWYRRISGVQRCLNSTYQRSIGMTP 102
+ K S D+ TK + + + + T + G TP
Sbjct: 921 EKIRIIKTSDDEETKLSKMETVLNIYNHKTKHDTTGQTP 959
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 32.7 bits (71), Expect = 0.42
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = -2
Query: 392 LRIQQQTFGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVI 216
+RI Q G P+ + +DR+ AF+S +++ + EG+ TT G +ER H+ I
Sbjct: 811 MRIFNQ-LGKPKLLKADRDGAFSSLALKEWLETEGVELQLNTT--KTGVADIERFHKTI 866
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 31.9 bits (69), Expect = 0.74
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = -2
Query: 392 LRIQQQTFGSPQKIISDRNAAFTSTNFQDYCKEEGITHYTITTGQPRGNGQVERIHQVII 213
+RI Q G P+ + +DR+ AF+S + + +EE + + T + G VER+H+ I
Sbjct: 864 MRIFNQ-LGKPKLLKADRDGAFSSLALKRWLEEEEV-ELQLNTAK-NGVADVERLHKTIN 920
Query: 212 SVLSKLSADD 183
+ +++ D
Sbjct: 921 EKIRIINSSD 930
>AY089271-1|AAL90009.1| 451|Drosophila melanogaster AT07338p
protein.
Length = 451
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 543 PLATYHIDHLGPLTSTHKNYKHILTVVDGFTKFTWIYP 430
P AT D +GPL + +L +VD F+K+T I P
Sbjct: 161 PWATVCADFVGPLPRSKHGNSMLLVLVDRFSKWTEIVP 198
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
Frame = -2
Query: 371 FGSPQKIISDRNAAFTSTNFQDYCKEE-GITHYTITTGQPRGNGQVERIHQVIISVLSKL 195
F + + + D AF S K GI NGQVER H + + S L
Sbjct: 867 FPNIKTVYCDNEPAFNSETVTSMLKNSFGIDIVNAPPLHSSSNGQVERFHSTLAEIASCL 926
Query: 194 SADDPT 177
D T
Sbjct: 927 KLDKKT 932
>BT023946-1|ABB36450.1| 2106|Drosophila melanogaster LD32003p protein.
Length = 2106
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 272 ITTGQPRGNGQVERIHQVIISVLSKLSA 189
I +G R G ++R+HQ+++S L KLS+
Sbjct: 1399 IGSGVARDIGDLKRVHQLLVSSLDKLSS 1426
>BT023795-1|AAZ41804.1| 2154|Drosophila melanogaster GH08786p protein.
Length = 2154
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 272 ITTGQPRGNGQVERIHQVIISVLSKLSA 189
I +G R G ++R+HQ+++S L KLS+
Sbjct: 1447 IGSGVARDIGDLKRVHQLLVSSLDKLSS 1474
>AE014297-689|AAF54180.1| 2117|Drosophila melanogaster CG2747-PB,
isoform B protein.
Length = 2117
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 272 ITTGQPRGNGQVERIHQVIISVLSKLSA 189
I +G R G ++R+HQ+++S L KLS+
Sbjct: 1410 IGSGVARDIGDLKRVHQLLVSSLDKLSS 1437
>AE014297-688|AAG22133.2| 2165|Drosophila melanogaster CG2747-PA,
isoform A protein.
Length = 2165
Score = 29.1 bits (62), Expect = 5.2
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -2
Query: 272 ITTGQPRGNGQVERIHQVIISVLSKLSA 189
I +G R G ++R+HQ+++S L KLS+
Sbjct: 1458 IGSGVARDIGDLKRVHQLLVSSLDKLSS 1485
>BT024407-1|ABC86469.1| 307|Drosophila melanogaster IP04017p
protein.
Length = 307
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 555 KGDVPLATYHIDHLGPLTSTHKNYKHILTVV 463
KGD P A YH H+G T T ++ H++ ++
Sbjct: 261 KGDNPAAMYH-GHVGGSTKTTQSQLHMIMII 290
>AE014134-1648|AAS64665.1| 1136|Drosophila melanogaster CG3811-PD,
isoform D protein.
Length = 1136
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 371 MFVVGFLTYLTSLLWTKFSVG*IQVNLVNPSTTV 472
M V GF+ +L L T+FS+G Q N+ S V
Sbjct: 462 MIVSGFVVFLPKYLETQFSLGKSQANIFTGSIAV 495
>AE014134-1647|AAS64664.1| 1197|Drosophila melanogaster CG3811-PC,
isoform C protein.
Length = 1197
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 371 MFVVGFLTYLTSLLWTKFSVG*IQVNLVNPSTTV 472
M V GF+ +L L T+FS+G Q N+ S V
Sbjct: 523 MIVSGFVVFLPKYLETQFSLGKSQANIFTGSIAV 556
>AE014134-1646|AAN10695.1| 1197|Drosophila melanogaster CG3811-PB,
isoform B protein.
Length = 1197
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 371 MFVVGFLTYLTSLLWTKFSVG*IQVNLVNPSTTV 472
M V GF+ +L L T+FS+G Q N+ S V
Sbjct: 523 MIVSGFVVFLPKYLETQFSLGKSQANIFTGSIAV 556
>AE014134-1645|AAF52781.2| 1197|Drosophila melanogaster CG3811-PA,
isoform A protein.
Length = 1197
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 371 MFVVGFLTYLTSLLWTKFSVG*IQVNLVNPSTTV 472
M V GF+ +L L T+FS+G Q N+ S V
Sbjct: 523 MIVSGFVVFLPKYLETQFSLGKSQANIFTGSIAV 556
>AE013599-2594|ABC66052.1| 394|Drosophila melanogaster CG33996-PA
protein.
Length = 394
Score = 28.3 bits (60), Expect = 9.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -1
Query: 555 KGDVPLATYHIDHLGPLTSTHKNYKHILTVV 463
KGD P A YH H+G T T ++ H++ ++
Sbjct: 348 KGDNPAAMYH-GHVGGSTKTTQSQLHMIMII 377
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,020,261
Number of Sequences: 53049
Number of extensions: 569701
Number of successful extensions: 1337
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2641708800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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